Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0184
         (688 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9YVJ8 Cluster: Putative uncharacterized protein MSV244...    33   6.5  
UniRef50_Q7RD16 Cluster: Putative uncharacterized protein PY0561...    33   8.6  
UniRef50_A5K149 Cluster: Putative uncharacterized protein; n=1; ...    33   8.6  

>UniRef50_Q9YVJ8 Cluster: Putative uncharacterized protein MSV244;
           n=1; Melanoplus sanguinipes entomopoxvirus|Rep: Putative
           uncharacterized protein MSV244 - Melanoplus sanguinipes
           entomopoxvirus (MsEPV)
          Length = 215

 Score = 33.1 bits (72), Expect = 6.5
 Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
 Frame = +3

Query: 24  ITNVVESNIFNKAVIWHSAGTFVLGYCNR-HVVLNDVKVNGFDCIYKC 164
           +TN+   NI+N  +I++   TF +G  ++  + +ND K++   CI KC
Sbjct: 10  LTNLNSGNIYN--LIYNKNYTFTIGRNSKCDIFINDKKISNIACIIKC 55


>UniRef50_Q7RD16 Cluster: Putative uncharacterized protein PY05610;
           n=4; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY05610 - Plasmodium yoelii yoelii
          Length = 883

 Score = 32.7 bits (71), Expect = 8.6
 Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
 Frame = +3

Query: 45  NIFNKAVIWHSAGTFVLGYCN-RHVVLNDVKVNGFD--CIYKCLLDVNCTTMFNISTM 209
           NIF K         +VL Y + ++ +LN ++ N FD  C Y  L    CT +FNI T+
Sbjct: 375 NIFFKMEKNEWVKNYVLQYEDFKNFILNSIENNKFDQPCFYYYLFINKCTQIFNIDTL 432


>UniRef50_A5K149 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium vivax|Rep: Putative uncharacterized protein -
            Plasmodium vivax
          Length = 3546

 Score = 32.7 bits (71), Expect = 8.6
 Identities = 14/40 (35%), Positives = 25/40 (62%)
 Frame = +3

Query: 189  MFNISTMHKLINVPSTYLHFNYHKCCM*VRVSRKCKDYVS 308
            +F +  M+K+++VPST+++ N +K  M +     C DY S
Sbjct: 1666 LFAVDIMNKIVHVPSTFINTNSYKKGMSILDIYTCLDYFS 1705


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 628,069,233
Number of Sequences: 1657284
Number of extensions: 11832611
Number of successful extensions: 24199
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 23502
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24195
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53719013270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)