Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0184
         (688 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83112-1|CAB05538.1|  742|Caenorhabditis elegans Hypothetical pr...    28   7.2  
AF125964-3|ABA03110.1|  805|Caenorhabditis elegans Hypothetical ...    28   7.2  
AF047655-2|ABD63245.1|  805|Caenorhabditis elegans Hypothetical ...    28   7.2  
AF025465-10|AAB71023.1|  805|Caenorhabditis elegans Hypothetical...    28   7.2  
AF016422-2|AAG24174.1|  805|Caenorhabditis elegans Hypothetical ...    28   7.2  
AC024831-3|ABD63213.1|  805|Caenorhabditis elegans Hypothetical ...    28   7.2  

>Z83112-1|CAB05538.1|  742|Caenorhabditis elegans Hypothetical
           protein K02B7.1 protein.
          Length = 742

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
 Frame = -1

Query: 391 ETGCQMNCAITLLLTKTSGSQPSLLCDGL---T*SLHFRDTLTYMQHL 257
           ET C++N   T L    +GS PS + DGL       HF   + YM HL
Sbjct: 381 ETECKINDEYTTLRENLTGSCPSTMNDGLRQRNQHSHFHKHVLYM-HL 427


>AF125964-3|ABA03110.1|  805|Caenorhabditis elegans Hypothetical
           protein W03G1.4 protein.
          Length = 805

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
 Frame = -1

Query: 391 ETGCQMNCAITLLLTKTSGSQPSLLCDGL---T*SLHFRDTLTYMQHL 257
           ET C++N   T L    +GS PS + DGL       HF   + YM HL
Sbjct: 381 ETECKINDEYTTLRENLTGSCPSTMNDGLRQRNQHSHFHKHVLYM-HL 427


>AF047655-2|ABD63245.1|  805|Caenorhabditis elegans Hypothetical
           protein C17B7.7 protein.
          Length = 805

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
 Frame = -1

Query: 391 ETGCQMNCAITLLLTKTSGSQPSLLCDGL---T*SLHFRDTLTYMQHL 257
           ET C++N   T L    +GS PS + DGL       HF   + YM HL
Sbjct: 381 ETECKINDEYTTLRENLTGSCPSTMNDGLRQRNQHSHFHKHVLYM-HL 427


>AF025465-10|AAB71023.1|  805|Caenorhabditis elegans Hypothetical
           protein K02E7.3 protein.
          Length = 805

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
 Frame = -1

Query: 391 ETGCQMNCAITLLLTKTSGSQPSLLCDGL---T*SLHFRDTLTYMQHL 257
           ET C++N   T L    +GS PS + DGL       HF   + YM HL
Sbjct: 381 ETECKINDEYTTLRENLTGSCPSTMNDGLRQRNQHSHFHKHVLYM-HL 427


>AF016422-2|AAG24174.1|  805|Caenorhabditis elegans Hypothetical
           protein R09E12.6 protein.
          Length = 805

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
 Frame = -1

Query: 391 ETGCQMNCAITLLLTKTSGSQPSLLCDGL---T*SLHFRDTLTYMQHL 257
           ET C++N   T L    +GS PS + DGL       HF   + YM HL
Sbjct: 381 ETECKINDEYTTLRENLTGSCPSTMNDGLRQRNQHSHFHKHVLYM-HL 427


>AC024831-3|ABD63213.1|  805|Caenorhabditis elegans Hypothetical
           protein Y55F3C.6 protein.
          Length = 805

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
 Frame = -1

Query: 391 ETGCQMNCAITLLLTKTSGSQPSLLCDGL---T*SLHFRDTLTYMQHL 257
           ET C++N   T L    +GS PS + DGL       HF   + YM HL
Sbjct: 381 ETECKINDEYTTLRENLTGSCPSTMNDGLRQRNQHSHFHKHVLYM-HL 427


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,794,494
Number of Sequences: 27780
Number of extensions: 302317
Number of successful extensions: 705
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 684
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 705
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)