Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0183
         (702 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    27   0.20 
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    23   2.4  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    22   5.6  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   7.4  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    21   9.7  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   9.7  

>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 26.6 bits (56), Expect = 0.20
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = +3

Query: 84  RCVPNRRSMGEKRHRPSSQHTVCPRS*DLQTRGMER 191
           +C P+   +  KRH P + HT C +  + Q  G ++
Sbjct: 55  KCTPDGAEL--KRHLPDALHTECSKCSETQKNGSKK 88


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = -1

Query: 501 FVKRLINLQLSFQSRYSQRLTVSH*RPLP 415
           FVK L  ++ +F S+Y   +TVS   PLP
Sbjct: 156 FVKLLQEMKQAFGSKYVLSVTVSA-NPLP 183


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 153 GKQCADYLGDVFFL 112
           GK C  Y+ D+F+L
Sbjct: 196 GKNCVTYVFDLFYL 209


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +3

Query: 303 HSIRTEPWRRPQDLDRQVNTTPA 371
           H  R EP R   ++DR   T PA
Sbjct: 323 HQRRNEPKRPRPNIDRHEVTRPA 345


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +1

Query: 241 DEVLKAGQTVIGLQAGSNK 297
           DE+   GQT++G+     K
Sbjct: 280 DEICNEGQTILGISYSLEK 298


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +1

Query: 241 DEVLKAGQTVIGLQAGSNK 297
           DE+   GQT++G+     K
Sbjct: 280 DEICNEGQTILGISYSLEK 298


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,533
Number of Sequences: 336
Number of extensions: 3780
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)