Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0182
         (696 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    39   0.10 
UniRef50_Q2U9P1 Cluster: Permease of the major facilitator super...    36   1.3  
UniRef50_A2FZ66 Cluster: CAMK family protein kinase; n=1; Tricho...    34   2.9  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 39.1 bits (87), Expect = 0.10
 Identities = 18/22 (81%), Positives = 19/22 (86%)
 Frame = +2

Query: 476 YLLLRLVDEFTAHLVLSGYRSP 541
           +LLLR VDE TAHLVLSGY SP
Sbjct: 154 FLLLRWVDELTAHLVLSGYWSP 175


>UniRef50_Q2U9P1 Cluster: Permease of the major facilitator
           superfamily; n=2; Aspergillus|Rep: Permease of the major
           facilitator superfamily - Aspergillus oryzae
          Length = 537

 Score = 35.5 bits (78), Expect = 1.3
 Identities = 22/49 (44%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = +2

Query: 347 IVNTAQYRTNVFLVIALSHS*NVDGCRR-RVPIIYVNYKIYTFFYLLLR 490
           I N     T +F+V+ALS     DGCR  R P IY    I T F +LLR
Sbjct: 343 INNYPMVTTGIFVVVALSWGWLSDGCRGIRWPFIYAGAIITTIFCVLLR 391


>UniRef50_A2FZ66 Cluster: CAMK family protein kinase; n=1;
           Trichomonas vaginalis G3|Rep: CAMK family protein kinase
           - Trichomonas vaginalis G3
          Length = 291

 Score = 34.3 bits (75), Expect = 2.9
 Identities = 19/61 (31%), Positives = 32/61 (52%)
 Frame = -3

Query: 496 HQPKQ*IKKGIYLIVYIYYRHPASATINIL*VAQRNYQEHISSILCSIYNNYIL*LAKFF 317
           +Q  Q I KG Y IVY+ Y +       +  V    +QE+    + +I ++Y++ L K+F
Sbjct: 14  YQYIQTIGKGTYGIVYLVYSNQYKIHFGVKRVLASKFQENEVESMIAIKSSYVVTLYKYF 73

Query: 316 Y 314
           Y
Sbjct: 74  Y 74


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 697,043,065
Number of Sequences: 1657284
Number of extensions: 13680800
Number of successful extensions: 23501
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22737
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23498
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54958682807
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)