Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0180
         (528 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    22   3.8  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   6.7  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    21   6.7  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   8.9  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    21   8.9  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    21   8.9  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    21   8.9  

>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +3

Query: 429 YTVRSGVDVISILESLGVTETLLKPLKESG 518
           YTV   +D+  IL++  +T+  L  + E G
Sbjct: 21  YTVPQNIDIDEILKNDRLTKNYLDCILEKG 50


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 527 ISSTRFFQRF*ECLC 483
           +S + FFQ+F  C C
Sbjct: 413 LSCSSFFQQFFHCYC 427


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +3

Query: 177 PIRILSSKVCCHHNFVNRPLL 239
           P+R+L     CH  F N  +L
Sbjct: 190 PMRVLHQCPVCHKKFTNALVL 210


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = +3

Query: 288 NDQEKPKREEEK 323
           +++EK KREE+K
Sbjct: 543 DEEEKKKREEDK 554


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -2

Query: 128 IITILYIKFCNLEPLYEILSNYLNIL 51
           I+TIL   F  +  L++I +  LN++
Sbjct: 76  IVTILGATFVTVLQLHKIFAKGLNVI 101


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -2

Query: 128 IITILYIKFCNLEPLYEILSNYLNIL 51
           I+TIL   F  +  L++I +  LN++
Sbjct: 76  IVTILGATFVTVLQLHKIFAKGLNVI 101


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -2

Query: 128 IITILYIKFCNLEPLYEILSNYLNIL 51
           I+TIL   F  +  L++I +  LN++
Sbjct: 76  IVTILGATFVTVLQLHKIFAKGLNVI 101


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,077
Number of Sequences: 336
Number of extensions: 2595
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12782794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)