Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0180
(528 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_35820| Best HMM Match : TRAP_240kDa (HMM E-Value=0.006) 31 0.59
SB_15879| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.78
SB_53752| Best HMM Match : TSP_1 (HMM E-Value=8.5e-11) 29 1.8
SB_33354| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_50101| Best HMM Match : TLD (HMM E-Value=0.0014) 29 1.8
SB_51142| Best HMM Match : RVT_1 (HMM E-Value=5.5e-39) 29 3.1
SB_50156| Best HMM Match : RVT_1 (HMM E-Value=7.2e-37) 29 3.1
SB_48126| Best HMM Match : RVT_1 (HMM E-Value=5.5e-39) 29 3.1
SB_47416| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_41330| Best HMM Match : Destabilase (HMM E-Value=5) 29 3.1
SB_35577| Best HMM Match : RVP (HMM E-Value=3e-05) 29 3.1
SB_27768| Best HMM Match : RVT_1 (HMM E-Value=5.5e-39) 29 3.1
SB_25140| Best HMM Match : RVT_1 (HMM E-Value=7.8e-38) 29 3.1
SB_21103| Best HMM Match : RVT_1 (HMM E-Value=7.8e-38) 29 3.1
SB_15135| Best HMM Match : RVT_1 (HMM E-Value=8.4e-39) 29 3.1
SB_9368| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_45108| Best HMM Match : RVT_1 (HMM E-Value=4.9e-37) 29 3.1
SB_44757| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_28642| Best HMM Match : RVT_1 (HMM E-Value=8.4e-39) 29 3.1
SB_15324| Best HMM Match : RVP (HMM E-Value=8.1e-05) 29 3.1
SB_44967| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_53100| Best HMM Match : HMD (HMM E-Value=2.8) 28 4.1
SB_10983| Best HMM Match : RVP (HMM E-Value=3.8e-05) 28 4.1
SB_11| Best HMM Match : E6 (HMM E-Value=2.2) 28 4.1
SB_7972| Best HMM Match : RVT_1 (HMM E-Value=5.8e-29) 27 7.2
SB_3336| Best HMM Match : Antimicrobial_9 (HMM E-Value=2.2) 27 7.2
SB_39979| Best HMM Match : RVT_1 (HMM E-Value=4.6e-12) 27 9.6
SB_39101| Best HMM Match : RVT_1 (HMM E-Value=2.4e-38) 27 9.6
SB_13949| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
SB_8553| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
SB_38467| Best HMM Match : RVT_1 (HMM E-Value=4.2e-05) 27 9.6
SB_11851| Best HMM Match : IncFII_repA (HMM E-Value=1.4) 27 9.6
SB_950| Best HMM Match : Flp_N (HMM E-Value=1.7) 27 9.6
>SB_35820| Best HMM Match : TRAP_240kDa (HMM E-Value=0.006)
Length = 1382
Score = 31.1 bits (67), Expect = 0.59
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +1
Query: 289 TIKRNPSGKKRKKLV*SRDLKKCTGITGMCYFQYTWRLPLYG 414
T+K +P GK++K L DLK+CT G ++ + P YG
Sbjct: 1058 TVKNDPKGKRKKGLSQRFDLKRCT--CGYAAYELSKYSPGYG 1097
>SB_15879| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 30.7 bits (66), Expect = 0.78
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +3
Query: 234 LLDFQQVSFSVTRPCTSMNDQEKPKREEEKKV 329
LLDFQ V ++ + +D +KPK+ +KK+
Sbjct: 37 LLDFQSVVIEASKLLETCSDSQKPKKSSDKKL 68
>SB_53752| Best HMM Match : TSP_1 (HMM E-Value=8.5e-11)
Length = 635
Score = 29.5 bits (63), Expect = 1.8
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Frame = +3
Query: 351 EMYRDYWYVLLPVHMATSAVWFGSCYYTVRSGVDVISI---LESLGVTETLLKPLKESGA 521
E D + L PV ++ + W+GSCY R G + + + G T T+++ K
Sbjct: 14 EYLNDLYMFLRPVQQSSKS-WWGSCYTASRDGWEAKTFHQKCDGKGPTVTIVRVGKNVFG 72
Query: 522 GY 527
GY
Sbjct: 73 GY 74
>SB_33354| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 81
Score = 29.5 bits (63), Expect = 1.8
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Frame = +3
Query: 351 EMYRDYWYVLLPVHMATSAVWFGSCYYTVRSGVDVISI---LESLGVTETLLKPLKESGA 521
E D + L PV ++ + W+GSCY R G + + + G T T+++ K
Sbjct: 14 EYLNDLYMFLRPVQQSSKS-WWGSCYTASRDGWEAKTFHQKCDGKGPTVTIVRVGKNVFG 72
Query: 522 GY 527
GY
Sbjct: 73 GY 74
>SB_50101| Best HMM Match : TLD (HMM E-Value=0.0014)
Length = 131
Score = 29.5 bits (63), Expect = 1.8
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Frame = +3
Query: 351 EMYRDYWYVLLPVHMATSAVWFGSCYYTVRSGVDVISI---LESLGVTETLLKPLKESGA 521
E D + L PV ++ + W+GSCY R G + + + G T T+++ K
Sbjct: 14 EYLNDLYMFLRPVQQSSKS-WWGSCYTASRDGWEAKTFHQKCDGKGPTVTIVRVGKNVFG 72
Query: 522 GY 527
GY
Sbjct: 73 GY 74
>SB_51142| Best HMM Match : RVT_1 (HMM E-Value=5.5e-39)
Length = 370
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +3
Query: 294 QEKPKREEEKKVGLIQRFKEMYRDYWYVLLPVHMATSAVWFGSCYYTVRSGVD-VISILE 470
Q+ P EE KK + K +Y+ Y LP +A++ F S T+ G+D V+ ++
Sbjct: 76 QQLPLGEESKKFLTVNTCKGLYQ---YNRLPFGVASAPAVFQSTIDTILKGIDGVVCYID 132
Query: 471 SLGVT 485
+ +T
Sbjct: 133 DILIT 137
>SB_50156| Best HMM Match : RVT_1 (HMM E-Value=7.2e-37)
Length = 493
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +3
Query: 294 QEKPKREEEKKVGLIQRFKEMYRDYWYVLLPVHMATSAVWFGSCYYTVRSGVD-VISILE 470
Q+ P EE KK + K +Y+ Y LP +A++ F S T+ G+D V+ ++
Sbjct: 356 QQLPLGEESKKFLTVNTCKGLYQ---YNRLPFGVASAPAVFQSTIDTILKGIDGVVCYID 412
Query: 471 SLGVT 485
+ +T
Sbjct: 413 DILIT 417
>SB_48126| Best HMM Match : RVT_1 (HMM E-Value=5.5e-39)
Length = 1510
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +3
Query: 294 QEKPKREEEKKVGLIQRFKEMYRDYWYVLLPVHMATSAVWFGSCYYTVRSGVD-VISILE 470
Q+ P EE KK + K +Y+ Y LP +A++ F S T+ G+D V+ ++
Sbjct: 522 QQLPLGEESKKFLTVNTCKGLYQ---YNRLPFGVASAPAVFQSTIDTILKGIDGVVCYID 578
Query: 471 SLGVT 485
+ +T
Sbjct: 579 DILIT 583
>SB_47416| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1413
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +3
Query: 294 QEKPKREEEKKVGLIQRFKEMYRDYWYVLLPVHMATSAVWFGSCYYTVRSGVD-VISILE 470
Q+ P EE KK + K +Y+ Y LP +A++ F S T+ G+D V+ ++
Sbjct: 501 QQLPLGEESKKFLTVNTCKGLYQ---YNRLPFGVASAPAVFQSTIDTILKGIDGVVCYID 557
Query: 471 SLGVT 485
+ +T
Sbjct: 558 DILIT 562
>SB_41330| Best HMM Match : Destabilase (HMM E-Value=5)
Length = 499
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +3
Query: 294 QEKPKREEEKKVGLIQRFKEMYRDYWYVLLPVHMATSAVWFGSCYYTVRSGVD-VISILE 470
Q+ P EE KK + K +Y+ Y LP +A++ F S T+ G+D V+ ++
Sbjct: 425 QQLPLGEESKKFLTVNTCKGLYQ---YNRLPFGVASAPAVFQSTVDTILKGIDGVVCYID 481
Query: 471 SLGVT 485
+ +T
Sbjct: 482 DILIT 486
>SB_35577| Best HMM Match : RVP (HMM E-Value=3e-05)
Length = 349
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +3
Query: 294 QEKPKREEEKKVGLIQRFKEMYRDYWYVLLPVHMATSAVWFGSCYYTVRSGVD-VISILE 470
Q+ P EE KK + K +Y+ Y LP +A++ F S T+ G+D V+ ++
Sbjct: 275 QQLPLGEESKKFLTVNTCKGLYQ---YNRLPFGVASAPAVFQSTIDTILKGIDGVVCYID 331
Query: 471 SLGVT 485
+ +T
Sbjct: 332 DILIT 336
>SB_27768| Best HMM Match : RVT_1 (HMM E-Value=5.5e-39)
Length = 366
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +3
Query: 294 QEKPKREEEKKVGLIQRFKEMYRDYWYVLLPVHMATSAVWFGSCYYTVRSGVD-VISILE 470
Q+ P EE KK + K +Y+ Y LP +A++ F S T+ G+D V+ ++
Sbjct: 132 QQLPLGEESKKFLTVNTCKGLYQ---YNRLPFGVASAPAVFQSTIDTILKGIDGVVCYID 188
Query: 471 SLGVT 485
+ +T
Sbjct: 189 DILIT 193
>SB_25140| Best HMM Match : RVT_1 (HMM E-Value=7.8e-38)
Length = 1425
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +3
Query: 294 QEKPKREEEKKVGLIQRFKEMYRDYWYVLLPVHMATSAVWFGSCYYTVRSGVD-VISILE 470
Q+ P EE KK + K +Y+ Y LP +A++ F S T+ G+D V+ ++
Sbjct: 1191 QQLPLGEESKKFLTVNTCKGLYQ---YNRLPFGVASAPAVFQSTIDTILKGIDGVVCYID 1247
Query: 471 SLGVT 485
+ +T
Sbjct: 1248 DILIT 1252
>SB_21103| Best HMM Match : RVT_1 (HMM E-Value=7.8e-38)
Length = 366
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +3
Query: 294 QEKPKREEEKKVGLIQRFKEMYRDYWYVLLPVHMATSAVWFGSCYYTVRSGVD-VISILE 470
Q+ P EE KK + K +Y+ Y LP +A++ F S T+ G+D V+ ++
Sbjct: 132 QQLPLGEESKKFLTVNTCKGLYQ---YNRLPFGVASAPAVFQSTIDTILKGIDGVVCYID 188
Query: 471 SLGVT 485
+ +T
Sbjct: 189 DILIT 193
>SB_15135| Best HMM Match : RVT_1 (HMM E-Value=8.4e-39)
Length = 794
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +3
Query: 294 QEKPKREEEKKVGLIQRFKEMYRDYWYVLLPVHMATSAVWFGSCYYTVRSGVD-VISILE 470
Q+ P EE KK + K +Y+ Y LP +A++ F S T+ G+D V+ ++
Sbjct: 657 QQLPLGEESKKFLTVNTCKGLYQ---YNRLPFGVASAPAVFQSTIDTILKGIDGVVCYID 713
Query: 471 SLGVT 485
+ +T
Sbjct: 714 DILIT 718
>SB_9368| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 874
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +3
Query: 294 QEKPKREEEKKVGLIQRFKEMYRDYWYVLLPVHMATSAVWFGSCYYTVRSGVD-VISILE 470
Q+ P EE KK + K +Y+ Y LP +A++ F S T+ G+D V+ ++
Sbjct: 737 QQLPLGEESKKFLTVNTCKGLYQ---YNRLPFGVASAPAVFQSTIDTILKGIDGVVCYID 793
Query: 471 SLGVT 485
+ +T
Sbjct: 794 DILIT 798
>SB_45108| Best HMM Match : RVT_1 (HMM E-Value=4.9e-37)
Length = 1122
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +3
Query: 294 QEKPKREEEKKVGLIQRFKEMYRDYWYVLLPVHMATSAVWFGSCYYTVRSGVD-VISILE 470
Q+ P EE KK + K +Y+ Y LP +A++ F S T+ G+D V+ ++
Sbjct: 538 QQLPLGEESKKFLTVNTCKGLYQ---YNRLPCGVASAPAVFQSTIDTILKGIDGVVCYID 594
Query: 471 SLGVT 485
+ +T
Sbjct: 595 DILIT 599
>SB_44757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 789
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +3
Query: 294 QEKPKREEEKKVGLIQRFKEMYRDYWYVLLPVHMATSAVWFGSCYYTVRSGVD-VISILE 470
Q+ P EE KK + K +Y+ Y LP +A++ F S T+ G+D V+ ++
Sbjct: 244 QQLPLGEESKKFLTVNTCKGLYQ---YNRLPFGVASAPAVFQSTIDTILKGIDGVVCYID 300
Query: 471 SLGVT 485
+ +T
Sbjct: 301 DILIT 305
>SB_28642| Best HMM Match : RVT_1 (HMM E-Value=8.4e-39)
Length = 1750
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +3
Query: 294 QEKPKREEEKKVGLIQRFKEMYRDYWYVLLPVHMATSAVWFGSCYYTVRSGVD-VISILE 470
Q+ P EE KK + K +Y+ Y LP +A++ F S T+ G+D V+ ++
Sbjct: 500 QQLPLGEESKKFLTVNTCKGLYQ---YNRLPFGVASAPAVFQSTIDTILKGIDGVVCYID 556
Query: 471 SLGVT 485
+ +T
Sbjct: 557 DILIT 561
>SB_15324| Best HMM Match : RVP (HMM E-Value=8.1e-05)
Length = 415
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +3
Query: 294 QEKPKREEEKKVGLIQRFKEMYRDYWYVLLPVHMATSAVWFGSCYYTVRSGVD-VISILE 470
Q+ P EE KK + K +Y+ Y LP +A++ F S T+ G+D V+ ++
Sbjct: 341 QQLPLGEESKKFLTVNTCKGLYQ---YNRLPFGVASAPAVFQSTIDTILKGIDGVVCYID 397
Query: 471 SLGVT 485
+ +T
Sbjct: 398 DILIT 402
>SB_44967| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1284
Score = 28.3 bits (60), Expect = 4.1
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +3
Query: 294 QEKPKREEEKKVGLIQRFKEMYRDYWYVLLPVHMATSAVWFGSCYYTVRSGVD-VISILE 470
Q+ P EE KK + K +Y+ Y LP +A++ F S T+ G+D V+ ++
Sbjct: 545 QQLPLGEESKKFLTVNTCKGLYQ---YNRLPFVVASAPAVFQSTIDTILKGIDGVVCYID 601
Query: 471 SLGVT 485
+ +T
Sbjct: 602 DILIT 606
>SB_53100| Best HMM Match : HMD (HMM E-Value=2.8)
Length = 159
Score = 28.3 bits (60), Expect = 4.1
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +3
Query: 294 QEKPKREEEKKVGLIQRFKEMYRDYWYVLLPVHMATSAVWFGSCYYTVRSGVD-VISILE 470
Q+ P EE KK + K +Y+ Y LP +A++ F S T+ G+D V+ ++
Sbjct: 15 QQLPLGEESKKFLTVNTCKGLYQ---YNRLPFGVASAPAVFQSTIDTILKGIDGVVYYID 71
Query: 471 SLGVT 485
+ +T
Sbjct: 72 DILIT 76
>SB_10983| Best HMM Match : RVP (HMM E-Value=3.8e-05)
Length = 717
Score = 28.3 bits (60), Expect = 4.1
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = +3
Query: 294 QEKPKREEEKKVGLIQRFKEMYRDYWYVLLPVHMATSAVWFGSCYYTVRSGVDVISI 464
Q+ P EE KK + K +Y+ Y LP +A++ F S T+ G+D I
Sbjct: 561 QQLPLGEESKKFLTVNTCKGLYQ---YNRLPFGVASAPAVFQSTIDTILKGIDAYQI 614
>SB_11| Best HMM Match : E6 (HMM E-Value=2.2)
Length = 485
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +1
Query: 313 KKRKKLV*SRDLKKCTGITGMCYFQYTWRLPL 408
+K+KK V SRDL K G+T C Q +LP+
Sbjct: 30 QKKKKQVESRDLLKLAGLTAQC--QQGGKLPV 59
>SB_7972| Best HMM Match : RVT_1 (HMM E-Value=5.8e-29)
Length = 382
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = -1
Query: 198 YLKEFEWGNFCLYPILP 148
YLK+ + +FCL+PILP
Sbjct: 80 YLKKRQSNSFCLFPILP 96
>SB_3336| Best HMM Match : Antimicrobial_9 (HMM E-Value=2.2)
Length = 240
Score = 27.5 bits (58), Expect = 7.2
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = +3
Query: 294 QEKPKREEEKKVGLIQRFKEMYRDYWYVLLPVHMATSAVWFGSCYYTVRSGVD 452
Q+ P EE KK + K +Y+ Y LP +A++ F S T+ G+D
Sbjct: 190 QQLPLGEESKKFLTVNTCKGLYQ---YNRLPFGVASAPAVFQSTIDTISQGID 239
>SB_39979| Best HMM Match : RVT_1 (HMM E-Value=4.6e-12)
Length = 792
Score = 27.1 bits (57), Expect = 9.6
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = -1
Query: 198 YLKEFEWGNFCLYPILP 148
YLK+ + +FCL+PILP
Sbjct: 246 YLKKRQPNSFCLFPILP 262
>SB_39101| Best HMM Match : RVT_1 (HMM E-Value=2.4e-38)
Length = 856
Score = 27.1 bits (57), Expect = 9.6
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +3
Query: 294 QEKPKREEEKKVGLIQRFKEMYRDYWYVLLPVHMATSAVWFGSCYYTVRSGVD-VISILE 470
Q+ P E+ KK + K +Y+ Y LP +A++ F S T+ G+D V+ ++
Sbjct: 622 QQLPLGEKSKKFLTVNTCKGLYQ---YNRLPFGVASAPAVFQSTIDTILKGIDGVVCYID 678
Query: 471 SLGVT 485
+ +T
Sbjct: 679 DILIT 683
>SB_13949| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 27.1 bits (57), Expect = 9.6
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = -1
Query: 198 YLKEFEWGNFCLYPILP 148
YLK+ + +FCL+PILP
Sbjct: 253 YLKKRQPNSFCLFPILP 269
>SB_8553| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 982
Score = 27.1 bits (57), Expect = 9.6
Identities = 11/38 (28%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +3
Query: 264 VTRPCTSMNDQEKPKREEEKKVGLIQRFKEMYRDY-WY 374
++R C Q P+ E + L+ K+++ DY WY
Sbjct: 50 ISRECDDRRFQSAPRAPETSREALVLDQKDVFTDYIWY 87
>SB_38467| Best HMM Match : RVT_1 (HMM E-Value=4.2e-05)
Length = 400
Score = 27.1 bits (57), Expect = 9.6
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = -1
Query: 198 YLKEFEWGNFCLYPILP 148
YLK+ + +FCL+PILP
Sbjct: 85 YLKKRQPNSFCLFPILP 101
>SB_11851| Best HMM Match : IncFII_repA (HMM E-Value=1.4)
Length = 401
Score = 27.1 bits (57), Expect = 9.6
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = -1
Query: 198 YLKEFEWGNFCLYPILP 148
YLK+ + +FCL+PILP
Sbjct: 157 YLKKRQPNSFCLFPILP 173
>SB_950| Best HMM Match : Flp_N (HMM E-Value=1.7)
Length = 247
Score = 27.1 bits (57), Expect = 9.6
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = -1
Query: 198 YLKEFEWGNFCLYPILP 148
YLK+ + +FCL+PILP
Sbjct: 38 YLKKRQPNSFCLFPILP 54
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,671,146
Number of Sequences: 59808
Number of extensions: 318160
Number of successful extensions: 807
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 806
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1197191618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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