Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0174
         (670 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    24   0.98 
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    22   4.0  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    22   4.0  
AF146649-1|AAD38009.1|   96|Tribolium castaneum ultrathorax prot...    22   4.0  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    22   5.2  
AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    21   9.1  
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    21   9.1  

>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 24.2 bits (50), Expect = 0.98
 Identities = 12/45 (26%), Positives = 26/45 (57%)
 Frame = +1

Query: 295 LRPLPFRRLQTGLTILSKYPVHQHLMLTVCWMMLHWDPLQQQYSN 429
           L+ L  R+++  L  L  + ++   +LT+C+ + +W   +QQY +
Sbjct: 87  LKLLKGRKIRKNLYYLLLFVINVLYVLTLCYAVYYW---RQQYED 128


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/39 (20%), Positives = 24/39 (61%)
 Frame = +3

Query: 531 LQIAKKELEDWYKSHEEQISKTKAANRESAKNAERAQAR 647
           L + +++++ W+++   ++ K   A +E  +  ++AQA+
Sbjct: 260 LCLTERQIKIWFQNRRMKLKKEIQAIKELNEQEKQAQAQ 298


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +3

Query: 183 MDDFGDSFVEPEVDPAADFLAREQNQL 263
           +D FG  + E  + P    ++R+QN L
Sbjct: 472 VDQFGAEWAETTIIPKVLAMSRDQNYL 498


>AF146649-1|AAD38009.1|   96|Tribolium castaneum ultrathorax
           protein.
          Length = 96

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/39 (20%), Positives = 24/39 (61%)
 Frame = +3

Query: 531 LQIAKKELEDWYKSHEEQISKTKAANRESAKNAERAQAR 647
           L + +++++ W+++   ++ K   A +E  +  ++AQA+
Sbjct: 42  LCLTERQIKIWFQNRRMKLKKEIQAIKELNEQEKQAQAQ 80


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
 Frame = +3

Query: 360 SAFDA-NGLLDDA--PLGSTPTTVFKQEREEPEKIK 458
           + FD  N  L+D   PLG + +  FKQ+ EE   +K
Sbjct: 26  TVFDIPNDYLNDKYKPLGVSLSNRFKQDAEETVPVK 61


>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 12/41 (29%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
 Frame = +3

Query: 555 EDWYKSHEEQISKTKAANRESAKNAERAQ---ARGSESSVE 668
           +D+ K H+  IS    A R      ERA+   +  +++S+E
Sbjct: 71  QDFKKKHKADISGNPRALRRLRTQCERAKRTLSSATQASIE 111


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 12/41 (29%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
 Frame = +3

Query: 555 EDWYKSHEEQISKTKAANRESAKNAERAQ---ARGSESSVE 668
           +D+ K H+  IS    A R      ERA+   +  +++S+E
Sbjct: 71  QDFKKKHKADISGNPRALRRLRTQCERAKRTLSSATQASIE 111


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,435
Number of Sequences: 336
Number of extensions: 2792
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)