Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0174
         (670 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ974170-1|ABJ52810.1|  511|Anopheles gambiae serpin 12 protein.       29   0.13 
AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    27   0.40 
AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    27   0.71 
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           26   1.2  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    25   2.2  
U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase...    23   6.6  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    23   8.7  

>DQ974170-1|ABJ52810.1|  511|Anopheles gambiae serpin 12 protein.
          Length = 511

 Score = 29.1 bits (62), Expect = 0.13
 Identities = 14/40 (35%), Positives = 25/40 (62%)
 Frame = +3

Query: 342 VEVPSASAFDANGLLDDAPLGSTPTTVFKQEREEPEKIKI 461
           +E  +  A DA+  LDDA +  TP ++ + + E+PEK+ +
Sbjct: 191 MEAMNEVAADAD--LDDAKMKKTPDSIDRVDHEQPEKMSL 228


>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 27.5 bits (58), Expect = 0.40
 Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
 Frame = +1

Query: 286 KPVLRPLPFRRLQTGLTILSKYPVHQ--HLMLTVCWMMLHWDPLQQQYSNK---NVRNLR 450
           +PV+      +L  GLT++    V +   L++T  W+ L W+ +  ++++     VR+LR
Sbjct: 23  RPVVNESDPLQLSFGLTLMQIIDVDEKNQLLITNIWLKLEWNDMNVRWNSSEYGGVRDLR 82


>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 26.6 bits (56), Expect = 0.71
 Identities = 16/60 (26%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
 Frame = +1

Query: 286 KPVLRPLPFRRLQTGLTILSKYPVHQ--HLMLTVCWMMLHWDPLQQQYSNK---NVRNLR 450
           +PV+      +L  GLT++    V +   L++T  W+ L W+ +  +++      VR+LR
Sbjct: 55  RPVVNESDPLQLSFGLTLMQIIDVDEKNQLLVTNIWLKLEWNDMNLRWNTSEYGGVRDLR 114


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 3/34 (8%)
 Frame = +3

Query: 36  LLKNELSP---CQFIFTIDCTLIC*FSHHFRQRV 128
           L KNEL     CQF F + C  +C   +H+ + V
Sbjct: 103 LHKNELKHVKFCQFAFDLKCDSVCVNPYHYERVV 136


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -3

Query: 233 CCWIDLRFNETVSKII 186
           CCW+ L+F E V+ I+
Sbjct: 790 CCWVWLKFQEWVAFIV 805


>U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 332

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -1

Query: 445 GSSRSCLNTVVGVDPNGASSNRPLASNAD 359
           G SRS ++  +  +  G S+ RP  + AD
Sbjct: 33  GRSRSFVDNAIRSEATGKSTGRPRKTTAD 61


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
 Frame = +1

Query: 316 RLQTGLTILSKYPVHQ--HLMLTVCWMMLHWDPLQQQYSNKNV 438
           +LQ  L+ L     HQ  H+ +T     + W+ L ++Y N  V
Sbjct: 162 KLQYLLSALKGDAAHQFEHMQITADNYYVTWEALLKRYDNSKV 204


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 609,488
Number of Sequences: 2352
Number of extensions: 11718
Number of successful extensions: 31
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66904800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)