Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0173
         (675 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.           25   2.9  
AY748829-1|AAV28177.1|  105|Anopheles gambiae cytochrome P450 pr...    23   8.8  

>DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.
          Length = 407

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -2

Query: 89  RIKEINRYICTSVPLAIFIFKPF 21
           R+ ++N YIC + P  I ++K F
Sbjct: 327 RLLKLNEYICRTCPRTIDLWKHF 349


>AY748829-1|AAV28177.1|  105|Anopheles gambiae cytochrome P450
           protein.
          Length = 105

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 11/24 (45%), Positives = 14/24 (58%), Gaps = 2/24 (8%)
 Frame = -1

Query: 231 ETLR--PISTQIEELCFLTFQYSD 166
           ETLR  PI+T +   C   +QY D
Sbjct: 13  ETLRRWPIATVLNRECVRNYQYDD 36


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 579,783
Number of Sequences: 2352
Number of extensions: 9760
Number of successful extensions: 6
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67741110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)