Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0170
         (719 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    23   1.9  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.5  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    21   7.6  

>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = -2

Query: 430 TTH*LNILREQVVTR 386
           TTH +N+LREQ  TR
Sbjct: 173 TTHVMNLLREQSRTR 187


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -3

Query: 240 LLT*MCFNYFITRLHYVY*IFYF 172
           LL  +C  YF+  L ++  I+YF
Sbjct: 127 LLFLLCIYYFVVPLFFLLCIYYF 149



 Score = 21.4 bits (43), Expect = 7.6
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -3

Query: 240 LLT*MCFNYFITRLHYVY*IFYF 172
           LL  +C +YF   L ++  I+YF
Sbjct: 193 LLFLLCLDYFTLHLLFLPCIYYF 215


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = -2

Query: 625 ARKRKREEMFSILSIGLWGIKSRLKPTIVIRPKLTLN 515
           A K     + +I+SIG W   + +   I   P+L  N
Sbjct: 88  ALKEINPNLKTIISIGGWNAGNAILAPIAASPELRAN 124


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,880
Number of Sequences: 336
Number of extensions: 2337
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)