Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0170
(719 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81109-17|CAB03241.2| 497|Caenorhabditis elegans Hypothetical p... 31 1.1
Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical pr... 30 1.4
AL132853-4|CAB60442.1| 1293|Caenorhabditis elegans Hypothetical ... 30 1.9
AL110471-2|CAB63306.1| 479|Caenorhabditis elegans Hypothetical ... 30 1.9
Z46792-4|CAA86767.2| 1531|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z46791-8|CAA86762.2| 1531|Caenorhabditis elegans Hypothetical pr... 29 3.3
U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly glu... 29 3.3
U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly glu... 29 3.3
Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p... 29 4.4
Z81571-11|CAC35914.1| 1579|Caenorhabditis elegans Hypothetical p... 29 4.4
Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z78200-10|CAN86608.1| 1312|Caenorhabditis elegans Hypothetical p... 29 4.4
Z78200-9|CAB01581.1| 1298|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z75312-1|CAA99730.1| 1298|Caenorhabditis elegans RAD50 homologue... 29 4.4
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 29 4.4
AL132848-7|CAC35915.1| 1579|Caenorhabditis elegans Hypothetical ... 29 4.4
AL021470-2|CAE17952.1| 398|Caenorhabditis elegans Hypothetical ... 29 4.4
Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical pr... 28 5.8
AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical ... 28 5.8
Z81066-5|CAB02969.1| 777|Caenorhabditis elegans Hypothetical pr... 28 7.7
AF067216-9|AAC17520.2| 646|Caenorhabditis elegans Hypothetical ... 28 7.7
AC026301-2|AAK68896.2| 320|Caenorhabditis elegans Hypothetical ... 28 7.7
AC006757-3|AAF60541.2| 916|Caenorhabditis elegans Hypothetical ... 28 7.7
>Z81109-17|CAB03241.2| 497|Caenorhabditis elegans Hypothetical
protein R10D12.10 protein.
Length = 497
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = -1
Query: 368 REKXKELQALKQRERDIIKEQRHRKEKEKM 279
++K KE + K++E+D KE+ RK KEK+
Sbjct: 379 KDKEKEKEKEKEKEKDKEKEREKRKSKEKI 408
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -1
Query: 368 REKXKELQALKQRERDIIKEQRHRKEKEK 282
+E+ KE K++E+D KE+ KEKEK
Sbjct: 365 KEREKEKDKEKEKEKDKEKEKEKEKEKEK 393
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -1
Query: 368 REKXKELQALKQRERDIIKEQRHRKEKEK 282
+EK +E + K++E++ KE+ KEKEK
Sbjct: 363 KEKEREKEKDKEKEKEKDKEKEKEKEKEK 391
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -1
Query: 368 REKXKELQALKQRERDIIKEQRHRKEKEK 282
+EK KE + K +E++ KE+ K+KEK
Sbjct: 369 KEKDKEKEKEKDKEKEKEKEKEKEKDKEK 397
>Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical
protein C11G6.3 protein.
Length = 385
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = -1
Query: 368 REKXKELQALKQRERDIIKEQRHRKEKEK 282
REK +E + K+RE++ KE+ +KE+EK
Sbjct: 230 REKEREKEREKEREKEREKEREKQKEREK 258
Score = 29.5 bits (63), Expect = 2.5
Identities = 23/100 (23%), Positives = 45/100 (45%), Gaps = 4/100 (4%)
Frame = -1
Query: 569 DKEQTETNNCDPTEVDVKQSTSKDLNIEKFKIDEDVNRIE----REIIKLNNSLVKYPQG 402
+++Q E D ++++ D ++ +E+ R E RE K L+K +
Sbjct: 155 ERQQKEKEREDAARREIEEKAEMDA--KRVAEEEEERRKEKEKRREEKKKQKELLKEKER 212
Query: 401 TSGHTNINLQIREKXKELQALKQRERDIIKEQRHRKEKEK 282
+ REK K + +++ER+ +E+ KE+EK
Sbjct: 213 SERKEKERELEREKEKSREKEREKEREKEREKEREKEREK 252
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -1
Query: 368 REKXKELQALKQRERDIIKEQRHRKEKEK 282
REK +E + K+RE++ K++ KE+EK
Sbjct: 234 REKEREKEREKEREKEREKQKEREKEREK 262
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -1
Query: 368 REKXKELQALKQRERDIIKEQRHRKEKEK 282
REK +E + KQ+ER+ +E+ KEK++
Sbjct: 242 REKEREKEREKQKEREKEREKEREKEKKR 270
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -1
Query: 368 REKXKELQALKQRERDIIKEQRHRKEKEK 282
REK +E + K+RE+ +E+ KE+EK
Sbjct: 238 REKEREKEREKEREKQKEREKEREKEREK 266
>AL132853-4|CAB60442.1| 1293|Caenorhabditis elegans Hypothetical
protein Y80D3A.8 protein.
Length = 1293
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/35 (42%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = -1
Query: 383 INLQIREKXKELQAL-KQRERDIIKEQRHRKEKEK 282
+N ++REK + +A KQ+E+D +E+R +EKEK
Sbjct: 939 LNAKVREKEERSEARRKQKEKDDEEEKRLYEEKEK 973
>AL110471-2|CAB63306.1| 479|Caenorhabditis elegans Hypothetical
protein T06D10.2 protein.
Length = 479
Score = 29.9 bits (64), Expect = 1.9
Identities = 23/98 (23%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Frame = -1
Query: 560 QTETNNCDPTEVDVKQ--STSKDLNIEKFKIDEDVNRIEREIIKLNNSLVKYPQGTSGHT 387
+T N+CDP + VK+ T + + +K K+ D + + +I+L+++ PQ +
Sbjct: 17 ETNENSCDPNQKGVKRVAQTPPEKDAKKVKLSRDSS--NQSVIELSDT---SPQKETSQQ 71
Query: 386 NINLQIREKXKELQALKQRERDIIKEQRHRKEKEKMTI 273
+ K + + + ER+ K ++ +E+EK I
Sbjct: 72 SPKAPKTPKTPKTPKVSREEREKQKREK-MEEREKQRI 108
>Z46792-4|CAA86767.2| 1531|Caenorhabditis elegans Hypothetical
protein C09G5.8 protein.
Length = 1531
Score = 29.1 bits (62), Expect = 3.3
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 6/86 (6%)
Frame = -1
Query: 521 VKQSTSKDLNIEKFKIDE-DVNRIERE---IIKLNNSLVKYPQGTSGHTNINLQIREKXK 354
+ T K L ++K K+ E D+ ++ E + K N LV S I EK K
Sbjct: 453 IPDQTEKVL-LDKLKVAENDLAMLQEECDLVKKANERLVHQSLSKSTEYGARESIEEKKK 511
Query: 353 --ELQALKQRERDIIKEQRHRKEKEK 282
EL+ L + IKE HR+ +++
Sbjct: 512 IVELEELLKETEKRIKESEHRRREDQ 537
>Z46791-8|CAA86762.2| 1531|Caenorhabditis elegans Hypothetical
protein C09G5.8 protein.
Length = 1531
Score = 29.1 bits (62), Expect = 3.3
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 6/86 (6%)
Frame = -1
Query: 521 VKQSTSKDLNIEKFKIDE-DVNRIERE---IIKLNNSLVKYPQGTSGHTNINLQIREKXK 354
+ T K L ++K K+ E D+ ++ E + K N LV S I EK K
Sbjct: 453 IPDQTEKVL-LDKLKVAENDLAMLQEECDLVKKANERLVHQSLSKSTEYGARESIEEKKK 511
Query: 353 --ELQALKQRERDIIKEQRHRKEKEK 282
EL+ L + IKE HR+ +++
Sbjct: 512 IVELEELLKETEKRIKESEHRRREDQ 537
>U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform a
protein.
Length = 1081
Score = 29.1 bits (62), Expect = 3.3
Identities = 9/25 (36%), Positives = 20/25 (80%)
Frame = -3
Query: 675 EKVTKERRRKKQKSLRTREREREKK 601
E++ ++++ K+Q++ +TRE RE+K
Sbjct: 1003 EEIEQQKKAKRQRNCKTREENRERK 1027
>U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform b
protein.
Length = 1647
Score = 29.1 bits (62), Expect = 3.3
Identities = 9/25 (36%), Positives = 20/25 (80%)
Frame = -3
Query: 675 EKVTKERRRKKQKSLRTREREREKK 601
E++ ++++ K+Q++ +TRE RE+K
Sbjct: 1003 EEIEQQKKAKRQRNCKTREENRERK 1027
>Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 28.7 bits (61), Expect = 4.4
Identities = 20/75 (26%), Positives = 38/75 (50%)
Frame = -1
Query: 515 QSTSKDLNIEKFKIDEDVNRIEREIIKLNNSLVKYPQGTSGHTNINLQIREKXKELQALK 336
+ + D+ K KI+ +V ++++I L SL K S + + QIR E+Q
Sbjct: 939 EDRTADVQRAKKKIEAEVEALKKQIQDLEMSLRK---AESEKQSKDHQIRSLQDEMQQQD 995
Query: 335 QRERDIIKEQRHRKE 291
+ + KE++H++E
Sbjct: 996 EAIAKLNKEKKHQEE 1010
>Z81571-11|CAC35914.1| 1579|Caenorhabditis elegans Hypothetical
protein M01G12.12 protein.
Length = 1579
Score = 28.7 bits (61), Expect = 4.4
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Frame = -1
Query: 560 QTETNNCDPTEVDVKQSTSKDLNI----EKFKIDEDVNRIEREIIKLNNSLVKYPQGTSG 393
+T C+P +++ + + D+ I EK K+ + R + + K +NS V+Y SG
Sbjct: 1476 ETRLRECEPFVIELPEKANMDMLIKKLTEKSKVSQLNLRRQDKNKKTSNSTVRYIVSASG 1535
Query: 392 HTNINLQIRE 363
Q+R+
Sbjct: 1536 TFESTQQLRK 1545
>Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical protein
F11C3.3 protein.
Length = 1963
Score = 28.7 bits (61), Expect = 4.4
Identities = 20/75 (26%), Positives = 38/75 (50%)
Frame = -1
Query: 515 QSTSKDLNIEKFKIDEDVNRIEREIIKLNNSLVKYPQGTSGHTNINLQIREKXKELQALK 336
+ + D+ K KI+ +V ++++I L SL K S + + QIR E+Q
Sbjct: 939 EDRTADVQRAKKKIEAEVEALKKQIQDLEMSLRK---AESEKQSKDHQIRSLQDEMQQQD 995
Query: 335 QRERDIIKEQRHRKE 291
+ + KE++H++E
Sbjct: 996 EAIAKLNKEKKHQEE 1010
>Z78200-10|CAN86608.1| 1312|Caenorhabditis elegans Hypothetical
protein T04H1.4b protein.
Length = 1312
Score = 28.7 bits (61), Expect = 4.4
Identities = 18/100 (18%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Frame = -1
Query: 581 RTLGDKEQTETNNCDPTEVDVK--QSTSKDLNIEKFKIDEDVNRIEREIIKLNNSLVKYP 408
R + DK + NC + +++ Q + + +E + + ++E+E+ +L + +
Sbjct: 410 RGMSDKARMIAKNCAELQSNLRTAQEAATKIEVEMKTLQNEKVKLEKEVEQLKFKIKQGQ 469
Query: 407 QGTSGHTNINLQIREKXKELQALKQRERDIIKEQRHRKEK 288
T+G ++ + K L L + + + E + ++EK
Sbjct: 470 NATAGMKDLLKKEEALRKSLADLPLLDENALTECKLKREK 509
>Z78200-9|CAB01581.1| 1298|Caenorhabditis elegans Hypothetical
protein T04H1.4a protein.
Length = 1298
Score = 28.7 bits (61), Expect = 4.4
Identities = 18/100 (18%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Frame = -1
Query: 581 RTLGDKEQTETNNCDPTEVDVK--QSTSKDLNIEKFKIDEDVNRIEREIIKLNNSLVKYP 408
R + DK + NC + +++ Q + + +E + + ++E+E+ +L + +
Sbjct: 396 RGMSDKARMIAKNCAELQSNLRTAQEAATKIEVEMKTLQNEKVKLEKEVEQLKFKIKQGQ 455
Query: 407 QGTSGHTNINLQIREKXKELQALKQRERDIIKEQRHRKEK 288
T+G ++ + K L L + + + E + ++EK
Sbjct: 456 NATAGMKDLLKKEEALRKSLADLPLLDENALTECKLKREK 495
>Z75312-1|CAA99730.1| 1298|Caenorhabditis elegans RAD50 homologue
ceRAD50 protein.
Length = 1298
Score = 28.7 bits (61), Expect = 4.4
Identities = 18/100 (18%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Frame = -1
Query: 581 RTLGDKEQTETNNCDPTEVDVK--QSTSKDLNIEKFKIDEDVNRIEREIIKLNNSLVKYP 408
R + DK + NC + +++ Q + + +E + + ++E+E+ +L + +
Sbjct: 396 RGMSDKARMIAKNCAELQSNLRTAQEAATKIEVEMKTLQNEKVKLEKEVEQLKFKIKQGQ 455
Query: 407 QGTSGHTNINLQIREKXKELQALKQRERDIIKEQRHRKEK 288
T+G ++ + K L L + + + E + ++EK
Sbjct: 456 NATAGMKDLLKKEEALRKSLADLPLLDENALTECKLKREK 495
>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
protein.
Length = 1966
Score = 28.7 bits (61), Expect = 4.4
Identities = 20/75 (26%), Positives = 38/75 (50%)
Frame = -1
Query: 515 QSTSKDLNIEKFKIDEDVNRIEREIIKLNNSLVKYPQGTSGHTNINLQIREKXKELQALK 336
+ + D+ K KI+ +V ++++I L SL K S + + QIR E+Q
Sbjct: 942 EDRTADVQRAKKKIEAEVEALKKQIQDLEMSLRK---AESEKQSKDHQIRSLQDEMQQQD 998
Query: 335 QRERDIIKEQRHRKE 291
+ + KE++H++E
Sbjct: 999 EAIAKLNKEKKHQEE 1013
>AL132848-7|CAC35915.1| 1579|Caenorhabditis elegans Hypothetical
protein M01G12.12 protein.
Length = 1579
Score = 28.7 bits (61), Expect = 4.4
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Frame = -1
Query: 560 QTETNNCDPTEVDVKQSTSKDLNI----EKFKIDEDVNRIEREIIKLNNSLVKYPQGTSG 393
+T C+P +++ + + D+ I EK K+ + R + + K +NS V+Y SG
Sbjct: 1476 ETRLRECEPFVIELPEKANMDMLIKKLTEKSKVSQLNLRRQDKNKKTSNSTVRYIVSASG 1535
Query: 392 HTNINLQIRE 363
Q+R+
Sbjct: 1536 TFESTQQLRK 1545
>AL021470-2|CAE17952.1| 398|Caenorhabditis elegans Hypothetical
protein Y17D7A.3b protein.
Length = 398
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = -3
Query: 687 AAKIEKVTKERRRKKQKSLRTREREREKKCFQFYQ*DF 574
AA++ K+ K R K+ L+TR+R++ + F + DF
Sbjct: 352 AARLAKLMKINNRIKESVLKTRQRQQIAELFNVWTVDF 389
>Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical protein
T28C6.9 protein.
Length = 1861
Score = 28.3 bits (60), Expect = 5.8
Identities = 25/99 (25%), Positives = 47/99 (47%), Gaps = 2/99 (2%)
Frame = -1
Query: 575 LGDKEQTETNNCDPTEVDVKQSTSKDLNIEKFK--IDEDVNRIEREIIKLNNSLVKYPQG 402
+ +KEQ +T+N + D ++ K+ EK +E RIE+ + +N + +
Sbjct: 1417 IAEKEQEKTDNDGWNDEDWREDDQKETESEKLTQLRNELTARIEQLESQKSNEQAQMSEK 1476
Query: 401 TSGHTNINLQIREKXKELQALKQRERDIIKEQRHRKEKE 285
S ++ +QI +K E + E D +K++ KE E
Sbjct: 1477 LSQVESMKVQIEQKLYE----TREELDDLKKELKLKEIE 1511
>AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical
protein E01A2.4 protein.
Length = 504
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/60 (26%), Positives = 31/60 (51%)
Frame = -1
Query: 458 RIEREIIKLNNSLVKYPQGTSGHTNINLQIREKXKELQALKQRERDIIKEQRHRKEKEKM 279
R+ + LNN P H L++ + E+QA +++R+ +KE R +++K +M
Sbjct: 209 RVNIQADGLNNIWGHSPTHEEIHDTYKLRVAAE--EIQAENEKKREELKEDRRKEKKREM 266
>Z81066-5|CAB02969.1| 777|Caenorhabditis elegans Hypothetical
protein F17B5.1a protein.
Length = 777
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = -3
Query: 681 KIEKVTKERRRKKQKSLRTREREREK 604
+IE+V+ E +KKQ+ L ++RE E+
Sbjct: 509 RIEEVSIEESKKKQEKLELKQREEEE 534
>AF067216-9|AAC17520.2| 646|Caenorhabditis elegans Hypothetical
protein C35E7.4 protein.
Length = 646
Score = 27.9 bits (59), Expect = 7.7
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 9/71 (12%)
Frame = -1
Query: 602 NVFNFINRTLGDKEQ---TETNNC-DPTEVDV---KQSTSK--DLNIEKFKIDEDVNRIE 450
++ F+N + G + E +C +PTE+D +Q S+ DL E+F +D D+ IE
Sbjct: 19 HIIKFLNESTGRIKNYVYNEATDCFEPTELDTNAGEQELSEVADLEKERFALDSDLTPIE 78
Query: 449 REIIKLNNSLV 417
+ + SL+
Sbjct: 79 LIQCEHDESLI 89
>AC026301-2|AAK68896.2| 320|Caenorhabditis elegans Hypothetical
protein Y54F10BM.5 protein.
Length = 320
Score = 27.9 bits (59), Expect = 7.7
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Frame = -1
Query: 491 IEKFKIDEDVNRI----EREIIKLNNSLVKYPQGTSGHTNINLQIREKXKE 351
++KF+I D RI + IKLN S ++Y + T+G ++ + K E
Sbjct: 60 VDKFRIHLDEIRIICNGNKVFIKLNESCIEYTKTTTGGAKVSFNKKIKILE 110
>AC006757-3|AAF60541.2| 916|Caenorhabditis elegans Hypothetical
protein Y40C7B.1 protein.
Length = 916
Score = 27.9 bits (59), Expect = 7.7
Identities = 21/90 (23%), Positives = 42/90 (46%)
Frame = -1
Query: 554 ETNNCDPTEVDVKQSTSKDLNIEKFKIDEDVNRIEREIIKLNNSLVKYPQGTSGHTNINL 375
+ +N P ++ V ST ++L ++ K + +EI++ + + Q N +
Sbjct: 181 KNHNRFPKQIPVAISTREELQQQRHKQQLEEYEKRKEILRREEEIKQQNQEREKQINEDF 240
Query: 374 QIREKXKELQALKQRERDIIKEQRHRKEKE 285
+ R + K LK+ E IK+Q +EK+
Sbjct: 241 EKRNQEK----LKREEE--IKQQNQEREKQ 264
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,296,122
Number of Sequences: 27780
Number of extensions: 208742
Number of successful extensions: 1261
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 936
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1227
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -