Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0169
(321 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC12D12.07c |trx2||mitochondrial thioredoxin Trx2|Schizosaccha... 43 1e-05
SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyc... 42 3e-05
SPBC577.08c |txl1|trx3|thioredoxin-like I protein Txl1|Schizosac... 35 0.003
SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces po... 29 0.13
SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces ... 29 0.17
SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces ... 28 0.40
SPAC4A8.09c |cwf21||complexed with Cdc5 protein Cwf21 |Schizosac... 27 0.93
SPAC18G6.05c |||translation elongation regulator Gcn1 |Schizosac... 25 2.8
SPCC1223.09 |||uricase |Schizosaccharomyces pombe|chr 3|||Manual 25 2.8
SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces po... 25 2.8
SPAC19G12.08 |||fatty acid hydroxylase |Schizosaccharomyces pomb... 25 3.8
SPAC823.16c |mug179||WD repeat protein Mug179|Schizosaccharomyce... 24 5.0
SPBC1271.05c |||zinc finger protein zf-AN1 type|Schizosaccharomy... 24 5.0
SPAC1805.01c |ppk6|SPAPJ736.02c|serine/threonine protein kinase ... 24 6.6
SPAC27D7.08c |||DUF890 family protein|Schizosaccharomyces pombe|... 23 8.7
SPAC2C4.06c |||rRNA methyltransferase |Schizosaccharomyces pombe... 23 8.7
SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharo... 23 8.7
SPAC644.10 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 23 8.7
>SPBC12D12.07c |trx2||mitochondrial thioredoxin
Trx2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 121
Score = 43.2 bits (97), Expect = 1e-05
Identities = 22/69 (31%), Positives = 41/69 (59%)
Frame = +1
Query: 34 CKQVTDVLEELLKLPEIQSSKTQCAVCDAEALSEVSLQYKVDSVPTVILFKNGTQVDRID 213
CK + LE+L + Q+ K +A+ S+++ + V ++PT++LF+ G ++DRI
Sbjct: 50 CKYLKPFLEKLSE----QNQKASFIAVNADKFSDIAQKNGVYALPTMVLFRKGQELDRIV 105
Query: 214 GADAAQIST 240
GAD +S+
Sbjct: 106 GADVKTLSS 114
>SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 103
Score = 41.5 bits (93), Expect = 3e-05
Identities = 17/46 (36%), Positives = 31/46 (67%)
Frame = +1
Query: 115 DAEALSEVSLQYKVDSVPTVILFKNGTQVDRIDGADAAQISTKIKA 252
D + LSE++ + V ++P+ L+KNG +++ I GA+ A++ IKA
Sbjct: 56 DVDQLSEIAAEAGVHAMPSFFLYKNGEKIEEIVGANPAKLEASIKA 101
>SPBC577.08c |txl1|trx3|thioredoxin-like I protein
Txl1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 290
Score = 35.1 bits (77), Expect = 0.003
Identities = 17/71 (23%), Positives = 36/71 (50%)
Frame = +1
Query: 34 CKQVTDVLEELLKLPEIQSSKTQCAVCDAEALSEVSLQYKVDSVPTVILFKNGTQVDRID 213
CK ++ + +L + S K A + + +++ V ++PT + F+NG Q+D +
Sbjct: 34 CKAISPLFSQLAS--KYASPKFVFAKVNVDEQRQIASGLGVKAMPTFVFFENGKQIDMLT 91
Query: 214 GADAAQISTKI 246
GA+ + K+
Sbjct: 92 GANPQALKEKV 102
>SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 492
Score = 29.5 bits (63), Expect = 0.13
Identities = 16/75 (21%), Positives = 30/75 (40%)
Frame = +1
Query: 79 EIQSSKTQCAVCDAEALSEVSLQYKVDSVPTVILFKNGTQVDRIDGADAAQISTKIKAQS 258
E++ D ++ +Y + PT+ +FKNG Q+ + G K +
Sbjct: 67 ELEKDGISLVEVDCTEEGDLCSEYSIRGYPTLNVFKNGKQISQYSGPRKHDALVKYMRKQ 126
Query: 259 LNKSPAEITPQKLED 303
L + I+ LE+
Sbjct: 127 LLPTVKPISKDTLEN 141
>SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 359
Score = 29.1 bits (62), Expect = 0.17
Identities = 25/84 (29%), Positives = 37/84 (44%)
Frame = +1
Query: 34 CKQVTDVLEELLKLPEIQSSKTQCAVCDAEALSEVSLQYKVDSVPTVILFKNGTQVDRID 213
CK + V EEL L E + DA+ S+V+ +Y + PT+I F D
Sbjct: 54 CKSLAPVYEELGALFE-DHNDVLIGKIDADTHSDVADKYHITGFPTLIWFPP-------D 105
Query: 214 GADAAQISTKIKAQSLNKSPAEIT 285
G++ Q S SL + +E T
Sbjct: 106 GSEPVQYSNARDVDSLTQFVSEKT 129
>SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 726
Score = 27.9 bits (59), Expect = 0.40
Identities = 15/69 (21%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +1
Query: 34 CKQVTDVLEELLKLPEIQSSKTQCAVCDAEALSEVSLQYKVDSVPTVILFKNGTQVDRID 213
CK++ + + +++ + Q + + + E+S + +VPT+ L++NG V+ +
Sbjct: 57 CKRLGPMWDNMVEKAKEQVEGSNFHFGEVDCSKELSSCANIRAVPTLYLYQNGEIVEEVP 116
Query: 214 -GADAAQIS 237
GA ++ S
Sbjct: 117 FGASTSEAS 125
>SPAC4A8.09c |cwf21||complexed with Cdc5 protein Cwf21
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 293
Score = 26.6 bits (56), Expect = 0.93
Identities = 17/63 (26%), Positives = 31/63 (49%)
Frame = +1
Query: 121 EALSEVSLQYKVDSVPTVILFKNGTQVDRIDGADAAQISTKIKAQSLNKSPAEITPQKLE 300
+ L EVS Q+ D+ + GT+ + A ++ K +SL+++ EI QK
Sbjct: 73 QLLEEVSSQHSTDAAASDSNTNFGTENPKPPKAIIKDEQSQSKTKSLDEADVEILVQKYR 132
Query: 301 DRL 309
++L
Sbjct: 133 EQL 135
>SPAC18G6.05c |||translation elongation regulator Gcn1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2670
Score = 25.0 bits (52), Expect = 2.8
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +1
Query: 37 KQVTDVLEELLKLPEIQSSKTQCAVCDAEALSEVSLQYKVDSVPTVI 177
+ V DVL +LLKL E ++ Q E +S S +PT+I
Sbjct: 2020 RAVDDVLPQLLKLLESENQSEQALSALREIISRRSSTIFPVLIPTLI 2066
>SPCC1223.09 |||uricase |Schizosaccharomyces pombe|chr 3|||Manual
Length = 296
Score = 25.0 bits (52), Expect = 2.8
Identities = 19/73 (26%), Positives = 31/73 (42%)
Frame = +1
Query: 43 VTDVLEELLKLPEIQSSKTQCAVCDAEALSEVSLQYKVDSVPTVILFKNGTQVDRIDGAD 222
V L+++L L S T C+ L EV+ + S+ FK+ + + G D
Sbjct: 146 VVSSLKDVLVLKSTGSGFTNFHKCEFTTLPEVTDRIFSTSIDCNYTFKHFDTFEELAGFD 205
Query: 223 AAQISTKIKAQSL 261
I K+K +L
Sbjct: 206 FNSIYEKVKEITL 218
>SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 363
Score = 25.0 bits (52), Expect = 2.8
Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
Frame = +1
Query: 34 CKQVTDVLEELLKLPEIQSSKTQCAV-CDAEALSEVSLQYKVDSVPTVILFKNGTQVDRI 210
CK++ ++L + S AV CDA+ V QY+V PT+ L ++ +
Sbjct: 63 CKKLVPTYQKLAS--NLHSLLPVTAVDCDADQNRAVCSQYQVQGFPTIKLVYPSSKGSSL 120
Query: 211 DGADAAQISTKIKAQSLNKSPAEITPQKLE 300
D + +SL K ++ P K++
Sbjct: 121 SSTD---YNGDRSYKSLQKFVSDSIPSKVK 147
>SPAC19G12.08 |||fatty acid hydroxylase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 347
Score = 24.6 bits (51), Expect = 3.8
Identities = 11/44 (25%), Positives = 20/44 (45%)
Frame = -1
Query: 294 FLRGYFCRTLIKTLCFNFCANLSSICSINPVYLSSILK*YNCRH 163
F+ G F TL++ F +L +P++L+ + C H
Sbjct: 189 FIIGLFTWTLVEYTMHRFLFHLDEYTPDHPIFLTMHFAFHGCHH 232
>SPAC823.16c |mug179||WD repeat protein Mug179|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 335
Score = 24.2 bits (50), Expect = 5.0
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = -1
Query: 258 TLCFNFCANLSSICSINPVYLSSIL 184
TLCF+ AN +SIC + +Y SS+L
Sbjct: 34 TLCFSKKANGASICEM--LYESSLL 56
>SPBC1271.05c |||zinc finger protein zf-AN1 type|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 215
Score = 24.2 bits (50), Expect = 5.0
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -2
Query: 41 CLHCSGPFC 15
CLHC+G FC
Sbjct: 166 CLHCNGRFC 174
>SPAC1805.01c |ppk6|SPAPJ736.02c|serine/threonine protein kinase
Ppk6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 775
Score = 23.8 bits (49), Expect = 6.6
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 232 ISTKIKAQSLNKSPAEITPQK 294
IST+ LN+SP I P+K
Sbjct: 109 ISTEALGDGLNRSPFTINPEK 129
>SPAC27D7.08c |||DUF890 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 385
Score = 23.4 bits (48), Expect = 8.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 25 PEQCKQVTDVLEELLKLPEIQSSK 96
PE C Q+ D+L++ L +I SK
Sbjct: 287 PELCAQIDDILQKFLDDNKIPWSK 310
>SPAC2C4.06c |||rRNA methyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 455
Score = 23.4 bits (48), Expect = 8.7
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -1
Query: 231 LSSICSINPVYLSSILK*YNCRH*IY 154
L ++CS L L+ NCRH Y
Sbjct: 317 LENLCSFQSTILKHALQFPNCRHVTY 342
>SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1588
Score = 23.4 bits (48), Expect = 8.7
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1
Query: 49 DVLEELLKLPEIQSSKTQCAVCDAEALSE 135
++L+ ++K E +K Q VCD LSE
Sbjct: 1253 ELLKRVVKQAEEFKNKMQSEVCDPTQLSE 1281
>SPAC644.10 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 116
Score = 23.4 bits (48), Expect = 8.7
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +1
Query: 37 KQVTDVLEELLKLPEIQSSKTQC 105
+QV ++LE K+P+I SS +C
Sbjct: 19 QQVQNILELEAKIPDILSSAGKC 41
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.317 0.131 0.362
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,172,905
Number of Sequences: 5004
Number of extensions: 20430
Number of successful extensions: 66
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 66
length of database: 2,362,478
effective HSP length: 63
effective length of database: 2,047,226
effective search space used: 88030718
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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