Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0168
         (615 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT010005-1|AAQ22474.1|  513|Drosophila melanogaster RE28239p pro...    30   2.9  
AE013599-1365|AAF58603.2| 1025|Drosophila melanogaster CG13188-P...    30   2.9  
AE013599-1364|AAM68700.2|  513|Drosophila melanogaster CG13188-P...    30   2.9  

>BT010005-1|AAQ22474.1|  513|Drosophila melanogaster RE28239p
           protein.
          Length = 513

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 18/57 (31%), Positives = 31/57 (54%)
 Frame = +3

Query: 417 NKDTNIDIVDAILMPEPNSSLNTNKFVKLWKSKFFITTSVRSLQRYFGKSRGADSIC 587
           N++T+I    A ++  PN +L + K VKL+  K F +   R L+R +   R  ++ C
Sbjct: 148 NEETSIG---AEILKLPNQALESEKIVKLFDMKKFQSNVNRELRRAYPDRRRLETQC 201


>AE013599-1365|AAF58603.2| 1025|Drosophila melanogaster CG13188-PA,
           isoform A protein.
          Length = 1025

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 18/57 (31%), Positives = 31/57 (54%)
 Frame = +3

Query: 417 NKDTNIDIVDAILMPEPNSSLNTNKFVKLWKSKFFITTSVRSLQRYFGKSRGADSIC 587
           N++T+I    A ++  PN +L + K VKL+  K F +   R L+R +   R  ++ C
Sbjct: 148 NEETSIG---AEILKLPNQALESEKIVKLFDMKKFQSNVNRELRRAYPDRRRLETQC 201


>AE013599-1364|AAM68700.2|  513|Drosophila melanogaster CG13188-PB,
           isoform B protein.
          Length = 513

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 18/57 (31%), Positives = 31/57 (54%)
 Frame = +3

Query: 417 NKDTNIDIVDAILMPEPNSSLNTNKFVKLWKSKFFITTSVRSLQRYFGKSRGADSIC 587
           N++T+I    A ++  PN +L + K VKL+  K F +   R L+R +   R  ++ C
Sbjct: 148 NEETSIG---AEILKLPNQALESEKIVKLFDMKKFQSNVNRELRRAYPDRRRLETQC 201


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,177,865
Number of Sequences: 53049
Number of extensions: 435203
Number of successful extensions: 1316
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1286
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1316
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2517878700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)