Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0167
         (603 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113535-1|AAM29540.1|  165|Drosophila melanogaster RE61190p pro...    29   6.4  
AE014297-2193|AAF55304.1|  165|Drosophila melanogaster CG10311-P...    29   6.4  

>AY113535-1|AAM29540.1|  165|Drosophila melanogaster RE61190p
           protein.
          Length = 165

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 25/119 (21%), Positives = 35/119 (29%)
 Frame = +2

Query: 158 LQKCCCCASTRTXXXXXXXXXXXXXXXXXXXXWTVKKHTVSFSTFIFDKEFDKKLSDLDI 337
           L  CC C STR                     +T + H   F T IFD          DI
Sbjct: 6   LNSCCLCQSTRNGSVISGILAIVLSIITIVVIFTTRVH---FKTIIFD------FIPNDI 56

Query: 338 PRXXXXXXXXXXXXXXXXXXVAINKRRSWLMLPWXXXXXXXXXXXXXXXXHTSITYYLD 514
            +                  +   KR  +LM+PW                +T I +++D
Sbjct: 57  VKIILVINLCMTILISLLMIIGALKRNHYLMVPWVVLGIMIAIGLLISVIYTGIVFFID 115


>AE014297-2193|AAF55304.1|  165|Drosophila melanogaster CG10311-PA
           protein.
          Length = 165

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 25/119 (21%), Positives = 35/119 (29%)
 Frame = +2

Query: 158 LQKCCCCASTRTXXXXXXXXXXXXXXXXXXXXWTVKKHTVSFSTFIFDKEFDKKLSDLDI 337
           L  CC C STR                     +T + H   F T IFD          DI
Sbjct: 6   LNSCCLCQSTRNGSVISGILAIVLSIITIVVIFTTRVH---FKTIIFD------FIPNDI 56

Query: 338 PRXXXXXXXXXXXXXXXXXXVAINKRRSWLMLPWXXXXXXXXXXXXXXXXHTSITYYLD 514
            +                  +   KR  +LM+PW                +T I +++D
Sbjct: 57  VKIILVINLCMTILISLLMIIGALKRNHYLMVPWVVLGIMIAIGLLISVIYTGIVFFID 115


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,482,443
Number of Sequences: 53049
Number of extensions: 433136
Number of successful extensions: 1013
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 999
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1013
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2462276481
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)