Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0166
         (732 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      25   0.48 
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      25   0.48 
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       23   1.9  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   1.9  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   4.4  
X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       21   7.8  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    21   7.8  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   7.8  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 25.4 bits (53), Expect = 0.48
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -3

Query: 349 KLQSHCVSRGSASVGRHLGRRW 284
           K+ + C  + SA++ + LGRRW
Sbjct: 496 KVVAECTLKESAAINQILGRRW 517


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 25.4 bits (53), Expect = 0.48
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -3

Query: 349 KLQSHCVSRGSASVGRHLGRRW 284
           K+ + C  + SA++ + LGRRW
Sbjct: 388 KVVAECTLKESAAINQILGRRW 409


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 18/76 (23%), Positives = 29/76 (38%)
 Frame = +1

Query: 133 FYSI*IELKFQFNHYAIIDXXXXXXXXXXXXXIGT*YRSTNPFCSWQQPRPSGDQDGGRR 312
           FYS  I   F +NH  +                     +T   C+    +P  +QD  RR
Sbjct: 90  FYSTPIVPHFAYNHNPLTPPNSEPLVSPKSEKEEKDMETTLTPCASPNRKPDDNQDHLRR 149

Query: 313 MQTHAKRNGTVI*KTS 360
           ++   +++G    KTS
Sbjct: 150 LEMSLEKSGLFSSKTS 165


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +1

Query: 247 STNPFCSWQQPRPSGDQDGGRRMQTHAK 330
           ST P   W +P  +   DG + +QT  K
Sbjct: 405 STTPRPEWARPPSTPSADGSKPVQTTPK 432


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +2

Query: 113 IRTYVTIFIQYE*S*NS 163
           + TY+ IFIQ++ S NS
Sbjct: 374 VTTYLVIFIQFDQSSNS 390


>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 133 FYSI*IELKFQFNHY 177
           F ++ +E +F FNHY
Sbjct: 16  FQTLELEKEFHFNHY 30


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 133 FYSI*IELKFQFNHY 177
           F ++ +E +F FNHY
Sbjct: 167 FQTLELEKEFHFNHY 181


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 133 FYSI*IELKFQFNHY 177
           F ++ +E +F FNHY
Sbjct: 226 FQTLELEKEFHFNHY 240


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,354
Number of Sequences: 336
Number of extensions: 3231
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19571740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)