Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0166
         (732 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ109808-1|AAZ83370.1| 2479|Homo sapiens nephrocystin-6 protein.       32   2.4  
AB002371-1|BAA20828.2| 1540|Homo sapiens KIAA0373 protein.             32   2.4  
U72849-1|AAD00186.1| 2033|Homo sapiens envoplakin protein.             31   3.2  
U53786-1|AAC64662.1| 2033|Homo sapiens envoplakin protein.             31   3.2  
BC126105-1|AAI26106.1| 2033|Homo sapiens envoplakin protein.           31   3.2  
BC126103-1|AAI26104.1| 2033|Homo sapiens envoplakin protein.           31   3.2  

>DQ109808-1|AAZ83370.1| 2479|Homo sapiens nephrocystin-6 protein.
          Length = 2479

 Score = 31.9 bits (69), Expect = 2.4
 Identities = 29/115 (25%), Positives = 62/115 (53%), Gaps = 16/115 (13%)
 Frame = -2

Query: 719  ESLSNWVRQVKNKSLTAKTKR--KRDLRVIAILSHSLVRAETELVMK-QRERARKWAQMQ 549
            E L   ++ +K+    A+T++  KR+L+V+ + +H L + + EL+ + +  + +  A+  
Sbjct: 2315 EDLEQQIKILKHVPEGAETEQGLKRELQVLRLANHQLDKEKAELIHQIEANKDQSGAEST 2374

Query: 548  V-----------DLGLSNKEEEIARRH-REKIDYLWKNDLSGLD-SFFKELDNVK 423
            +           DL    K  ++ ++H +E+I  L K +L   D SFF+E++++K
Sbjct: 2375 IPDADQLKEKIKDLETQLKMSDLEKQHLKEEIKKL-KKELENFDPSFFEEIEDLK 2428


>AB002371-1|BAA20828.2| 1540|Homo sapiens KIAA0373 protein.
          Length = 1540

 Score = 31.9 bits (69), Expect = 2.4
 Identities = 29/115 (25%), Positives = 62/115 (53%), Gaps = 16/115 (13%)
 Frame = -2

Query: 719  ESLSNWVRQVKNKSLTAKTKR--KRDLRVIAILSHSLVRAETELVMK-QRERARKWAQMQ 549
            E L   ++ +K+    A+T++  KR+L+V+ + +H L + + EL+ + +  + +  A+  
Sbjct: 1376 EDLEQQIKILKHVPEGAETEQGLKRELQVLRLANHQLDKEKAELIHQIEANKDQSGAEST 1435

Query: 548  V-----------DLGLSNKEEEIARRH-REKIDYLWKNDLSGLD-SFFKELDNVK 423
            +           DL    K  ++ ++H +E+I  L K +L   D SFF+E++++K
Sbjct: 1436 IPDADQLKEKIKDLETQLKMSDLEKQHLKEEIKKL-KKELENFDPSFFEEIEDLK 1489


>U72849-1|AAD00186.1| 2033|Homo sapiens envoplakin protein.
          Length = 2033

 Score = 31.5 bits (68), Expect = 3.2
 Identities = 21/71 (29%), Positives = 34/71 (47%)
 Frame = -2

Query: 698  RQVKNKSLTAKTKRKRDLRVIAILSHSLVRAETELVMKQRERARKWAQMQVDLGLSNKEE 519
            R+ KN  +     +K   +   I    ++R + + V++  ERAR W  +  +       E
Sbjct: 1497 RECKNLQVQIDVLQKAKSQEKTIYKE-VIRVQKDRVLED-ERARVWEMLNRERTARQARE 1554

Query: 518  EIARRHREKID 486
            E ARR RE+ID
Sbjct: 1555 EEARRLRERID 1565


>U53786-1|AAC64662.1| 2033|Homo sapiens envoplakin protein.
          Length = 2033

 Score = 31.5 bits (68), Expect = 3.2
 Identities = 21/71 (29%), Positives = 34/71 (47%)
 Frame = -2

Query: 698  RQVKNKSLTAKTKRKRDLRVIAILSHSLVRAETELVMKQRERARKWAQMQVDLGLSNKEE 519
            R+ KN  +     +K   +   I    ++R + + V++  ERAR W  +  +       E
Sbjct: 1497 RECKNLQVQIDVLQKAKSQEKTIYKE-VIRVQKDRVLED-ERARVWEMLNRERTARQARE 1554

Query: 518  EIARRHREKID 486
            E ARR RE+ID
Sbjct: 1555 EEARRLRERID 1565


>BC126105-1|AAI26106.1| 2033|Homo sapiens envoplakin protein.
          Length = 2033

 Score = 31.5 bits (68), Expect = 3.2
 Identities = 21/71 (29%), Positives = 34/71 (47%)
 Frame = -2

Query: 698  RQVKNKSLTAKTKRKRDLRVIAILSHSLVRAETELVMKQRERARKWAQMQVDLGLSNKEE 519
            R+ KN  +     +K   +   I    ++R + + V++  ERAR W  +  +       E
Sbjct: 1497 RECKNLQVQIDVLQKAKSQEKTIYKE-VIRVQKDRVLED-ERARVWEMLNRERTARQARE 1554

Query: 518  EIARRHREKID 486
            E ARR RE+ID
Sbjct: 1555 EEARRLRERID 1565


>BC126103-1|AAI26104.1| 2033|Homo sapiens envoplakin protein.
          Length = 2033

 Score = 31.5 bits (68), Expect = 3.2
 Identities = 21/71 (29%), Positives = 34/71 (47%)
 Frame = -2

Query: 698  RQVKNKSLTAKTKRKRDLRVIAILSHSLVRAETELVMKQRERARKWAQMQVDLGLSNKEE 519
            R+ KN  +     +K   +   I    ++R + + V++  ERAR W  +  +       E
Sbjct: 1497 RECKNLQVQIDVLQKAKSQEKTIYKE-VIRVQKDRVLED-ERARVWEMLNRERTARQARE 1554

Query: 518  EIARRHREKID 486
            E ARR RE+ID
Sbjct: 1555 EEARRLRERID 1565


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,809,689
Number of Sequences: 237096
Number of extensions: 1901271
Number of successful extensions: 4509
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4308
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4505
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8679165170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)