Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0165
         (650 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.2  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    22   3.8  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    22   3.8  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    22   3.8  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   6.7  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           21   6.7  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   8.8  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   8.8  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   8.8  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    21   8.8  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   8.8  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   8.8  
AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochr...    21   8.8  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -1

Query: 38   LVPNSCSPGIH 6
            LVP +C+PG+H
Sbjct: 1229 LVPQNCAPGLH 1239


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +2

Query: 221 SDAYKNSNTRNNYDRYENYQNCQ 289
           S  + +S T NNY    N +NC+
Sbjct: 145 SGDFHDSCTVNNYQDASNVRNCE 167


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +2

Query: 221 SDAYKNSNTRNNYDRYENYQNCQ 289
           S  + +S T NNY    N +NC+
Sbjct: 146 SGDFHDSCTVNNYQDASNVRNCE 168


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +2

Query: 221 SDAYKNSNTRNNYDRYENYQNCQ 289
           S  + +S T NNY    N +NC+
Sbjct: 146 SGDFHDSCTVNNYQDASNVRNCE 168


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 152 FTSNVWCTFNDVRSLK 105
           +  N W  F+D RSLK
Sbjct: 825 YRGNQWVGFDDERSLK 840


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +2

Query: 221 SDAYKNSNTRNNY 259
           SD  KN NT +NY
Sbjct: 27  SDCDKNQNTEHNY 39


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = +2

Query: 221 SDAYKNSNTRNNY 259
           SD  KN NT  NY
Sbjct: 27  SDCDKNQNTEQNY 39


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +2

Query: 200 RSYSTKISDAYKNSNTRNNYDRYEN 274
           R Y  K  D  KN  ++N Y+   N
Sbjct: 332 RKYLCKNEDETKNHYSKNTYNEQGN 356


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +2

Query: 200 RSYSTKISDAYKNSNTRNNYDRYEN 274
           R Y  K  D  KN  ++N Y+   N
Sbjct: 224 RKYLCKNEDETKNHYSKNTYNEQGN 248


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = +2

Query: 221 SDAYKNSNTRNNY 259
           SD  KN NT  NY
Sbjct: 27  SDCDKNQNTEQNY 39


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 9/28 (32%), Positives = 11/28 (39%)
 Frame = -1

Query: 293 FIDSFDSFRNGRSYFLYYCFCMRLISLY 210
           FI  FD   N   YF     C+  +  Y
Sbjct: 371 FISDFDCDINSIQYFCLMARCLNTLIFY 398


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 17/70 (24%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
 Frame = -1

Query: 368 FRWVRIHSLYFL--RYKCTSRLNVP--HFFIDSFDSFRNGRSYFLYYCFCMRLISLYCNF 201
           F +  +H L+ L   Y     L +P  ++F  +F  F     + L+YC  + L+ +Y  +
Sbjct: 186 FIFFNMHLLFLLCLDYFTLHLLFLPCIYYFYSAFIIFT---IHLLFYCVLIILLCIYYFY 242

Query: 200 FINLVTRRHL 171
           +  ++   HL
Sbjct: 243 YAFILFTVHL 252


>AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 124

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -3

Query: 405 SVQIASLRYLLDFSLGSYSFP 343
           SV +   R  +D ++G Y FP
Sbjct: 60  SVPVIERRLEVDCNIGGYDFP 80


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,857
Number of Sequences: 336
Number of extensions: 3083
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)