Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0165
(650 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 27 0.21
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 26 0.27
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 25 0.84
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 24 1.1
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 23 1.9
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 23 1.9
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 23 1.9
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 23 1.9
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 23 1.9
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 23 1.9
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 23 1.9
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 23 1.9
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 23 2.6
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 22 4.5
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 22 4.5
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 22 5.9
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 22 5.9
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 22 5.9
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 22 5.9
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 22 5.9
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 22 5.9
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 22 5.9
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 22 5.9
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 22 5.9
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 22 5.9
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 22 5.9
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 22 5.9
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 21 7.8
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 26.6 bits (56), Expect = 0.21
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 200 RSYSTKISDAYKNSNTRNNYDRYENYQN 283
RS KI + N+ +NY+ Y NY N
Sbjct: 308 RSKEPKIISSLSNNYKYSNYNNYNNYNN 335
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 26.2 bits (55), Expect = 0.27
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 3/27 (11%)
Frame = +2
Query: 212 TKISDAYKNSNTRN---NYDRYENYQN 283
+ +S+ YK SN N NY+ Y NY N
Sbjct: 316 SSLSNNYKYSNYNNYNNNYNNYNNYNN 342
Score = 22.6 bits (46), Expect = 3.4
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +2
Query: 200 RSYSTKISDAYKNSNTRNNYDRYENYQN 283
RS KI + N+ +NY+ Y N N
Sbjct: 308 RSKEPKIISSLSNNYKYSNYNNYNNNYN 335
Score = 22.2 bits (45), Expect = 4.5
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +2
Query: 203 SYSTKISDAYKNSNTRNNYDRYENYQN 283
S + K S+ +N NNY+ Y N N
Sbjct: 319 SNNYKYSNYNNYNNNYNNYNNYNNNYN 345
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 24.6 bits (51), Expect = 0.84
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +2
Query: 230 YKNSNTRNNYDRYEN 274
Y N+N NNY+ Y N
Sbjct: 329 YNNNNYNNNYNNYNN 343
Score = 21.4 bits (43), Expect = 7.8
Identities = 10/27 (37%), Positives = 11/27 (40%)
Frame = +2
Query: 203 SYSTKISDAYKNSNTRNNYDRYENYQN 283
S S K N N N + Y NY N
Sbjct: 317 SLSNKTIHNNNNYNNNNYNNNYNNYNN 343
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 24.2 bits (50), Expect = 1.1
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2
Query: 200 RSYSTKISDAYKNSNTRNNYDRYENY 277
RS KI + N+ +NY+ Y NY
Sbjct: 75 RSKEPKIISSLSNNYKYSNYNNYNNY 100
Score = 21.8 bits (44), Expect = 5.9
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +2
Query: 230 YKNSNTRNNYDRYENYQN 283
Y N N NNY++ Y+N
Sbjct: 91 YSNYNNYNNYNKKLYYKN 108
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 1.9
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +2
Query: 200 RSYSTKISDAYKNSNTRNNYDRYENYQN 283
RS KI + N+ +NY+ Y N N
Sbjct: 75 RSKEPKIVSSLSNNYNYSNYNNYNNNNN 102
Score = 23.0 bits (47), Expect = 2.6
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +2
Query: 230 YKNSNTRNNYDRYENYQ 280
Y N N NN + Y NY+
Sbjct: 91 YSNYNNYNNNNNYNNYK 107
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 23.4 bits (48), Expect = 1.9
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +2
Query: 200 RSYSTKISDAYKNSNTRNNYDRYENYQN 283
RS KI + N+ +NY+ Y N N
Sbjct: 75 RSKEPKIISSLSNNYNYSNYNNYNNNNN 102
Score = 23.0 bits (47), Expect = 2.6
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +2
Query: 230 YKNSNTRNNYDRYENYQ 280
Y N N NN + Y NY+
Sbjct: 91 YSNYNNYNNNNNYNNYK 107
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 1.9
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +2
Query: 200 RSYSTKISDAYKNSNTRNNYDRYENYQN 283
RS KI + N+ +NY+ Y N N
Sbjct: 75 RSKEPKIISSLSNNYNYSNYNNYNNNNN 102
Score = 23.0 bits (47), Expect = 2.6
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +2
Query: 230 YKNSNTRNNYDRYENYQ 280
Y N N NN + Y NY+
Sbjct: 91 YSNYNNYNNNNNYNNYK 107
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 1.9
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +2
Query: 200 RSYSTKISDAYKNSNTRNNYDRYENYQN 283
RS KI + N+ +NY+ Y N N
Sbjct: 75 RSKEPKIISSLSNNYNYSNYNNYNNNNN 102
Score = 23.0 bits (47), Expect = 2.6
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +2
Query: 230 YKNSNTRNNYDRYENYQ 280
Y N N NN + Y NY+
Sbjct: 91 YSNYNNYNNNNNYNNYK 107
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 1.9
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +2
Query: 200 RSYSTKISDAYKNSNTRNNYDRYENYQN 283
RS KI + N+ +NY+ Y N N
Sbjct: 75 RSKEPKIISSLSNNYNYSNYNNYNNNNN 102
Score = 23.0 bits (47), Expect = 2.6
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +2
Query: 230 YKNSNTRNNYDRYENYQ 280
Y N N NN + Y NY+
Sbjct: 91 YSNYNNYNNNNNYNNYK 107
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 1.9
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +2
Query: 200 RSYSTKISDAYKNSNTRNNYDRYENYQN 283
RS KI + N+ +NY+ Y N N
Sbjct: 75 RSKEPKIISSLSNNYNYSNYNNYNNNNN 102
Score = 23.0 bits (47), Expect = 2.6
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +2
Query: 230 YKNSNTRNNYDRYENYQ 280
Y N N NN + Y NY+
Sbjct: 91 YSNYNNYNNNNNYNNYK 107
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 1.9
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +2
Query: 200 RSYSTKISDAYKNSNTRNNYDRYENYQN 283
RS KI + N+ +NY+ Y N N
Sbjct: 75 RSKEPKIISSLSNNYNYSNYNNYNNNNN 102
Score = 23.0 bits (47), Expect = 2.6
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +2
Query: 230 YKNSNTRNNYDRYENYQ 280
Y N N NN + Y NY+
Sbjct: 91 YSNYNNYNNNNNYNNYK 107
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 1.9
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +2
Query: 200 RSYSTKISDAYKNSNTRNNYDRYENYQN 283
RS KI + N+ +NY+ Y N N
Sbjct: 75 RSKEPKIISSLSNNYNYSNYNNYNNNNN 102
Score = 23.0 bits (47), Expect = 2.6
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +2
Query: 230 YKNSNTRNNYDRYENYQ 280
Y N N NN + Y NY+
Sbjct: 91 YSNYNNYNNNNNYNNYK 107
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 23.0 bits (47), Expect = 2.6
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +2
Query: 200 RSYSTKISDAYKNSNTRNNYDRYENYQN 283
RS KI + N+ +NY+ Y N N
Sbjct: 75 RSREPKIISSLSNNYNYSNYNNYNNNYN 102
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 22.2 bits (45), Expect = 4.5
Identities = 13/54 (24%), Positives = 21/54 (38%)
Frame = +2
Query: 227 AYKNSNTRNNYDRYENYQNCQ*RSAERSI*KYIYTAKSKGNEYEPNEKSRRYRS 388
+YKN N+ Y ++ ERS + I ++ S Y N Y +
Sbjct: 282 SYKNENSYRKYRETSKERSRDRTERERSKERKIISSLSNNYNYNNNNYKYNYNN 335
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 22.2 bits (45), Expect = 4.5
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = -1
Query: 410 LIRYRLLHYDTF*IFRWVRIHSLYFLRYKCTSRLNVP 300
++ Y + DT + WV++ LY+L C R++ P
Sbjct: 315 ILNYHHRNADTHEMSEWVKVVFLYWL--PCILRMSRP 349
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 5.9
Identities = 9/33 (27%), Positives = 17/33 (51%)
Frame = -1
Query: 647 INYSSRRNFQRFPKSGALYIGHWWSQPCGIWHS 549
+ Y + N ++ P +Y G++ +P G W S
Sbjct: 108 LQYYNIINIEQIPVPVPIYCGNFPPRPMGPWIS 140
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 5.9
Identities = 9/33 (27%), Positives = 17/33 (51%)
Frame = -1
Query: 647 INYSSRRNFQRFPKSGALYIGHWWSQPCGIWHS 549
+ Y + N ++ P +Y G++ +P G W S
Sbjct: 108 LQYYNIINIEQIPVPVPIYCGNFPPRPMGPWIS 140
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 5.9
Identities = 9/33 (27%), Positives = 17/33 (51%)
Frame = -1
Query: 647 INYSSRRNFQRFPKSGALYIGHWWSQPCGIWHS 549
+ Y + N ++ P +Y G++ +P G W S
Sbjct: 108 LQYYNIINIEQIPVPVPIYCGNFPPRPMGPWIS 140
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 5.9
Identities = 9/33 (27%), Positives = 17/33 (51%)
Frame = -1
Query: 647 INYSSRRNFQRFPKSGALYIGHWWSQPCGIWHS 549
+ Y + N ++ P +Y G++ +P G W S
Sbjct: 108 LQYYNIINIEQIPVPVPIYCGNFPPRPMGPWIS 140
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 5.9
Identities = 9/33 (27%), Positives = 17/33 (51%)
Frame = -1
Query: 647 INYSSRRNFQRFPKSGALYIGHWWSQPCGIWHS 549
+ Y + N ++ P +Y G++ +P G W S
Sbjct: 108 LQYYNIINIEQIPVPVPIYCGNFPPRPMGPWIS 140
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 5.9
Identities = 9/33 (27%), Positives = 17/33 (51%)
Frame = -1
Query: 647 INYSSRRNFQRFPKSGALYIGHWWSQPCGIWHS 549
+ Y + N ++ P +Y G++ +P G W S
Sbjct: 108 LQYYNIINIEQIPVPVPIYCGNFPPRPMGPWIS 140
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 5.9
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +2
Query: 236 NSNTRNNYDRYENYQN 283
N N NNY+ Y N N
Sbjct: 91 NYNYNNNYNNYNNNYN 106
Score = 21.8 bits (44), Expect = 5.9
Identities = 9/33 (27%), Positives = 17/33 (51%)
Frame = -1
Query: 647 INYSSRRNFQRFPKSGALYIGHWWSQPCGIWHS 549
+ Y + N ++ P +Y G++ +P G W S
Sbjct: 112 LQYYNIINIEQIPVPVPIYCGNFPPRPMGPWIS 144
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 5.9
Identities = 9/33 (27%), Positives = 17/33 (51%)
Frame = -1
Query: 647 INYSSRRNFQRFPKSGALYIGHWWSQPCGIWHS 549
+ Y + N ++ P +Y G++ +P G W S
Sbjct: 108 LQYYNIINIEQIPVPVPIYCGNFPPRPMGPWIS 140
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 5.9
Identities = 18/86 (20%), Positives = 37/86 (43%), Gaps = 2/86 (2%)
Frame = +2
Query: 200 RSYSTKISDAYKNSNTRNNYDRYENYQNCQ*RSA--ERSI*KYIYTAKSKGNEYEPNEKS 373
R Y ++ K + + RY + + +S ER +Y T++ + + + E+S
Sbjct: 17 RQYEKLYNEKEKFLEEKTSRKRYSRSREREQKSYKNEREYREYRETSRERSRDRKERERS 76
Query: 374 RRYRSEAICTESEDKKYPYQTNFK*N 451
+ + I + S + KY N+ N
Sbjct: 77 KE--PKIISSLSNNYKYSNYNNYNNN 100
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 5.9
Identities = 18/86 (20%), Positives = 37/86 (43%), Gaps = 2/86 (2%)
Frame = +2
Query: 200 RSYSTKISDAYKNSNTRNNYDRYENYQNCQ*RSA--ERSI*KYIYTAKSKGNEYEPNEKS 373
R Y ++ K + + RY + + +S ER +Y T++ + + + E+S
Sbjct: 17 RQYEKLYNEKEKFLEEKTSRKRYSRSREREQKSYKNEREYREYRETSRERSRDRKERERS 76
Query: 374 RRYRSEAICTESEDKKYPYQTNFK*N 451
+ + I + S + KY N+ N
Sbjct: 77 KE--PKIISSLSNNYKYSNYNNYNNN 100
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 5.9
Identities = 18/86 (20%), Positives = 37/86 (43%), Gaps = 2/86 (2%)
Frame = +2
Query: 200 RSYSTKISDAYKNSNTRNNYDRYENYQNCQ*RSA--ERSI*KYIYTAKSKGNEYEPNEKS 373
R Y ++ K + + RY + + +S ER +Y T++ + + + E+S
Sbjct: 17 RQYEKLYNEKEKFLEEKTSRKRYSRSREREQKSYKNEREYREYRETSRERSRDRKERERS 76
Query: 374 RRYRSEAICTESEDKKYPYQTNFK*N 451
+ + I + S + KY N+ N
Sbjct: 77 KE--PKIISSLSNNYKYSNYNNYNNN 100
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 5.9
Identities = 18/86 (20%), Positives = 37/86 (43%), Gaps = 2/86 (2%)
Frame = +2
Query: 200 RSYSTKISDAYKNSNTRNNYDRYENYQNCQ*RSA--ERSI*KYIYTAKSKGNEYEPNEKS 373
R Y ++ K + + RY + + +S ER +Y T++ + + + E+S
Sbjct: 17 RQYEKLYNEKEKFLEEKTSRKRYSRSREREQKSYKNEREYREYRETSRERSRDRKERERS 76
Query: 374 RRYRSEAICTESEDKKYPYQTNFK*N 451
+ + I + S + KY N+ N
Sbjct: 77 KE--PKIISSLSNNYKYSNYNNYNNN 100
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.4 bits (43), Expect = 7.8
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +3
Query: 576 PPVPNVQSPRFGKPLKVSPGAI 641
PP+PN+ + PL PG++
Sbjct: 418 PPIPNMSNMSGMPPLPNMPGSM 439
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,790
Number of Sequences: 438
Number of extensions: 4337
Number of successful extensions: 93
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 85
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -