Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0164
(652 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12083| Best HMM Match : No HMM Matches (HMM E-Value=.) 79 4e-15
SB_23047| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 8e-05
SB_43832| Best HMM Match : CBM_14 (HMM E-Value=2.8e-16) 43 2e-04
SB_58073| Best HMM Match : CBM_14 (HMM E-Value=1.4e-17) 41 0.001
SB_13694| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.009
SB_1784| Best HMM Match : CBM_14 (HMM E-Value=7e-18) 38 0.009
SB_27121| Best HMM Match : CBM_14 (HMM E-Value=5.8e-29) 37 0.012
SB_27119| Best HMM Match : CBM_14 (HMM E-Value=4.1e-15) 37 0.012
SB_58074| Best HMM Match : CBM_14 (HMM E-Value=2.7e-14) 37 0.016
SB_2441| Best HMM Match : CBM_14 (HMM E-Value=2.1e-09) 36 0.029
SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.20
SB_11257| Best HMM Match : GCC2_GCC3 (HMM E-Value=2.7e-11) 32 0.35
SB_41623| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.35
SB_55021| Best HMM Match : EGF_CA (HMM E-Value=1.4013e-45) 32 0.47
SB_32719| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.81
SB_47132| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.81
SB_41624| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_9611| Best HMM Match : p450 (HMM E-Value=1.1e-05) 30 1.9
SB_45927| Best HMM Match : WD40 (HMM E-Value=9e-18) 29 2.5
SB_30749| Best HMM Match : FARP (HMM E-Value=0.032) 29 2.5
SB_15410| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_10280| Best HMM Match : F-box (HMM E-Value=5.2e-09) 29 3.3
SB_19418| Best HMM Match : Mucin (HMM E-Value=0.024) 29 4.3
SB_14427| Best HMM Match : Cadherin (HMM E-Value=0) 29 4.3
SB_6742| Best HMM Match : EGF_CA (HMM E-Value=5.40004e-41) 29 4.3
SB_21134| Best HMM Match : PAN (HMM E-Value=0.0002) 28 5.7
SB_28593| Best HMM Match : CUB (HMM E-Value=1.3e-14) 28 5.7
SB_40933| Best HMM Match : DUF548 (HMM E-Value=1.7) 28 7.6
SB_3108| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
>SB_12083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1671
Score = 78.6 bits (185), Expect = 4e-15
Identities = 52/177 (29%), Positives = 78/177 (44%), Gaps = 14/177 (7%)
Frame = +2
Query: 122 NERYPVSGSCDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVPCLERSSLQP- 298
N +Y + +C+ ++ C NG CP LRY+P C++ + V C +R ++ P
Sbjct: 523 NGKYADANNCNGFVMCSNGYIYYMDCPSNLRYDPAKG----RCEWADTVDCGQRPTISPH 578
Query: 299 -PQPTELCPHQ------FGYFK----LGDARNCSGFRNCVNGVGYDFVCPDGLAFNSETY 445
P+PT + P F K D NC+GF C NG Y CP L F+++
Sbjct: 579 PPKPTTMPPQPTPPKSPFCEEKKNGDYADPSNCNGFITCSNGYAYKRDCPFNLKFDTKKL 638
Query: 446 RCEWPDEVADCDAEAFLGFRCPEVPIS--RELGPPAGYRYYRSDNNCQKYFLCIDGH 610
CEWP++V + + P S E G YR +NC Y +C G+
Sbjct: 639 ECEWPNKVNCKSRPTTVPYVTKPTPPSGNSEFCKKNGNGRYRDPHNCLGYIVCRGGN 695
Score = 70.5 bits (165), Expect = 1e-12
Identities = 56/199 (28%), Positives = 74/199 (37%), Gaps = 17/199 (8%)
Frame = +2
Query: 104 GQCRELNER-YPVSGSCDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVPC-L 277
G C E ++ Y +C+ +I C N CP+ LR+NP C P V C
Sbjct: 441 GFCAERSDGDYQDPDACEGFISCSNHITYHMPCPENLRFNPTTKH----CDNPENVQCGP 496
Query: 278 ERSSLQPPQPTELCPHQFGYF-------KLGDARNCSGFRNCVNGVGYDFVCPDGLAFNS 436
R PT P F K DA NC+GF C NG Y CP L ++
Sbjct: 497 TRPPTPKVPPTTKAPFTKSPFCVGKQNGKYADANNCNGFVMCSNGYIYYMDCPSNLRYDP 556
Query: 437 ETYRCEWPDEVADCDAEAFLGFRCPE-VPISRELGPPAG-------YRYYRSDNNCQKYF 592
RCEW D V DC + P+ + + PP Y +NC +
Sbjct: 557 AKGRCEWADTV-DCGQRPTISPHPPKPTTMPPQPTPPKSPFCEEKKNGDYADPSNCNGFI 615
Query: 593 LCIDGHPRVLYCGGESAFD 649
C +G+ C FD
Sbjct: 616 TCSNGYAYKRDCPFNLKFD 634
Score = 62.1 bits (144), Expect = 4e-10
Identities = 41/124 (33%), Positives = 54/124 (43%), Gaps = 2/124 (1%)
Frame = +2
Query: 89 PVRPTGQCRELNE-RYPVSGSCDRYIECING-TAEEKLCPDGLRYNPNVNFDVYPCQYPN 262
P+ + C E + Y S +C+ YI C NG T + CP GL +N + C YP+
Sbjct: 309 PLVDSNFCTERQDGNYADSSNCNLYITCSNGFTIANRHCPTGLAFNEAIGM----CDYPS 364
Query: 263 EVPCLERSSLQPPQPTELCPHQFGYFKLGDARNCSGFRNCVNGVGYDFVCPDGLAFNSET 442
VP SS + C H+ D+ NC GF C NG Y CP F+
Sbjct: 365 NVPGCSGSS-----GSGFC-HEKSDGNYKDSGNCHGFIMCSNGHTYHMTCPGQTNFDPAK 418
Query: 443 YRCE 454
RCE
Sbjct: 419 KRCE 422
Score = 60.1 bits (139), Expect = 2e-09
Identities = 42/129 (32%), Positives = 58/129 (44%), Gaps = 9/129 (6%)
Frame = +2
Query: 110 CREL-NERYPVSGSCDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVPCLERS 286
C E N Y +C+ +I C NG A ++ CP L+++ C++PN+V C R
Sbjct: 597 CEEKKNGDYADPSNCNGFITCSNGYAYKRDCPFNLKFDTKK----LECEWPNKVNCKSRP 652
Query: 287 SLQP----PQP----TELCPHQFGYFKLGDARNCSGFRNCVNGVGYDFVCPDGLAFNSET 442
+ P P P +E C G + D NC G+ C G Y C GL FN T
Sbjct: 653 TTVPYVTKPTPPSGNSEFCKKN-GNGRYRDPHNCLGYIVCRGGNIYFRNCRRGLRFNGVT 711
Query: 443 YRCEWPDEV 469
RC+ P V
Sbjct: 712 KRCDLPRNV 720
Score = 54.8 bits (126), Expect = 6e-08
Identities = 31/101 (30%), Positives = 45/101 (44%), Gaps = 1/101 (0%)
Frame = +2
Query: 350 DARNCSGFRNCVNGVGY-DFVCPDGLAFNSETYRCEWPDEVADCDAEAFLGFRCPEVPIS 526
D+ NC+ + C NG + CP GLAFN C++P V C + GF C E
Sbjct: 326 DSSNCNLYITCSNGFTIANRHCPTGLAFNEAIGMCDYPSNVPGCSGSSGSGF-CHEKSDG 384
Query: 527 RELGPPAGYRYYRSDNNCQKYFLCIDGHPRVLYCGGESAFD 649
Y+ NC + +C +GH + C G++ FD
Sbjct: 385 N----------YKDSGNCHGFIMCSNGHTYHMTCPGQTNFD 415
Score = 44.0 bits (99), Expect = 1e-04
Identities = 38/119 (31%), Positives = 48/119 (40%), Gaps = 4/119 (3%)
Frame = +2
Query: 89 PVRPTGQ---CREL-NERYPVSGSCDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQY 256
P P+G C++ N RY +C YI C G + C GLR+N C
Sbjct: 661 PTPPSGNSEFCKKNGNGRYRDPHNCLGYIVCRGGNIYFRNCRRGLRFNGVTK----RCDL 716
Query: 257 PNEVPCLERSSLQPPQPTELCPHQFGYFKLGDARNCSGFRNCVNGVGYDFVCPDGLAFN 433
P V C T + G + DA NC+GF C N + Y F CP L FN
Sbjct: 717 PRNVKCAGAGG-----GTFCEGRKDGDYV--DAVNCNGFIKCSNQLTYYFDCPSNLRFN 768
>SB_23047| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1601
Score = 44.4 bits (100), Expect = 8e-05
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Frame = +2
Query: 257 PNEVPCLERSSLQPPQPTELCPHQFGYFKL----GDARNCSGFRNCVNGVGYDFVCPDGL 424
PN + C + ++ P + T +F K D ++CS + C G + CPDGL
Sbjct: 203 PNSIRCFGQGNIPPGKATPAEDEKFCAGKTDGTYADPKDCSAYYQCKKGRSFKKFCPDGL 262
Query: 425 AFNSETYRCEWPDEV 469
FN+ C+ P +V
Sbjct: 263 KFNALIKSCDEPSKV 277
Score = 37.9 bits (84), Expect = 0.007
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +2
Query: 149 CDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVPCLER 283
C Y +C G + +K CPDGL++N + C P++V C+ +
Sbjct: 242 CSAYYQCKKGRSFKKFCPDGLKFNALIK----SCDEPSKVNCVTK 282
>SB_43832| Best HMM Match : CBM_14 (HMM E-Value=2.8e-16)
Length = 518
Score = 42.7 bits (96), Expect = 2e-04
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +2
Query: 350 DARNCSGFRNCVNGVGYDFVCPDGLAFNSETYRCEWPDEV 469
+ NC GF C G+ + CP GL FN++ C+W EV
Sbjct: 468 EKENCYGFVLCGGGIAHKKTCPPGLIFNTDLMVCDWSHEV 507
Score = 33.9 bits (74), Expect = 0.12
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +2
Query: 131 YPVSGSCDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVPC 274
Y +C ++ C G A +K CP GL +N D+ C + +EV C
Sbjct: 466 YAEKENCYGFVLCGGGIAHKKTCPPGLIFNT----DLMVCDWSHEVKC 509
>SB_58073| Best HMM Match : CBM_14 (HMM E-Value=1.4e-17)
Length = 225
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/48 (39%), Positives = 22/48 (45%)
Frame = +2
Query: 131 YPVSGSCDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVPC 274
YP C YI C NG A E CP GL +N + C +P PC
Sbjct: 94 YPHPDFCKMYIACSNGIAYEMPCPAGLNWNDEKKY----CDWPFNAPC 137
Score = 40.7 bits (91), Expect = 0.001
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 362 CSGFRNCVNGVGYDFVCPDGLAFNSETYRCEWP 460
C + C NG+ Y+ CP GL +N E C+WP
Sbjct: 100 CKMYIACSNGIAYEMPCPAGLNWNDEKKYCDWP 132
>SB_13694| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 767
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +2
Query: 362 CSGFRNCVNGVGYDFVCPDGLAFNSETYRCEWPDEVADC 478
C GF +C N CP GL +N +T +C+WP V DC
Sbjct: 91 CRGFIHCHNYNASYKPCPGGLLYNEKTKQCDWPRNV-DC 128
Score = 33.5 bits (73), Expect = 0.15
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = +2
Query: 146 SCDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVPC 274
+C +I C N A K CP GL YN C +P V C
Sbjct: 90 ACRGFIHCHNYNASYKPCPGGLLYNEKTK----QCDWPRNVDC 128
>SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5222
Score = 37.5 bits (83), Expect = 0.009
Identities = 27/79 (34%), Positives = 35/79 (44%)
Frame = +2
Query: 35 YQPFGQTNRFQNQYQEQAPVRPTGQCRELNERYPVSGSCDRYIECINGTAEEKLCPDGLR 214
Y P+ +TN + P RP CRE +Y R+ C TAE +CP G
Sbjct: 2988 YCPYNETNI------DGIPCRPKYFCRE-GAKYETYCPAGRF--CNYTTAEPYICPGG-H 3037
Query: 215 YNPNVNFDVYPCQYPNEVP 271
Y PN + PC+YP P
Sbjct: 3038 YCPNGSDTYTPCEYPYYCP 3056
Score = 31.1 bits (67), Expect = 0.81
Identities = 25/85 (29%), Positives = 37/85 (43%)
Frame = +2
Query: 167 CINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVPCLERSSLQPPQPTELCPHQFGYFKL 346
C +G+ + PDG Y P V + PC+ + P ++ L P T + + G +
Sbjct: 2820 CKSGSPDPN--PDG--YWPPV--EAGPCKMGHYCPKGTQAPLPCPDNT-MKNYTGGAGTV 2872
Query: 347 GDARNCSGFRNCVNGVGYDFVCPDG 421
D C R CVNG + CP G
Sbjct: 2873 DDCTPCPAGRYCVNGTAFGVPCPPG 2897
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +2
Query: 302 QPT-ELCPHQFGYFKLGDARNCSGFRNCVNGVGYDFVCPDG 421
QPT + CP GY+ DA+ C C GV +CP+G
Sbjct: 2742 QPTCDPCPA--GYYCDPDAKKCPSHNYCPAGVTVPILCPNG 2780
>SB_1784| Best HMM Match : CBM_14 (HMM E-Value=7e-18)
Length = 123
Score = 37.5 bits (83), Expect = 0.009
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +2
Query: 113 RELNERYPVSGSCDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVPCLER 283
+ N Y +C YI C N E+ CP GL +N + C +P PC E+
Sbjct: 64 KRANGDYAHPENCKMYITCSNKITYERQCPAGLNWNDAKKW----CDWPKNAPCEEK 116
Score = 36.7 bits (81), Expect = 0.016
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +2
Query: 359 NCSGFRNCVNGVGYDFVCPDGLAFNSETYRCEWPDEVADCD 481
NC + C N + Y+ CP GL +N C+WP A C+
Sbjct: 75 NCKMYITCSNKITYERQCPAGLNWNDAKKWCDWPKN-APCE 114
>SB_27121| Best HMM Match : CBM_14 (HMM E-Value=5.8e-29)
Length = 339
Score = 37.1 bits (82), Expect = 0.012
Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Frame = +2
Query: 350 DARNCSGFRNC-VNGVGYDFVCPDGLAFNSETYRCEWPDEVADCDAEAFL--GFRCP-EV 517
D RNCS F C + CP GL ++ C+WP V DCD FRC
Sbjct: 125 DPRNCSRFYQCDAFHKAFLHSCPSGLKWSVTKTTCDWPRYV-DCDIGGAYKPPFRCNLRD 183
Query: 518 PISRELGPPAGY 553
PI +++G G+
Sbjct: 184 PIPKKIGCLKGW 195
>SB_27119| Best HMM Match : CBM_14 (HMM E-Value=4.1e-15)
Length = 220
Score = 37.1 bits (82), Expect = 0.012
Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Frame = +2
Query: 350 DARNCSGFRNC-VNGVGYDFVCPDGLAFNSETYRCEWPDEVADCDAEAFL--GFRCP-EV 517
D RNCS F C + CP GL ++ C+WP V DCD FRC
Sbjct: 32 DPRNCSRFYQCDAFHKAFLHSCPSGLKWSVTKTTCDWPRYV-DCDIGGAYKPPFRCNLRD 90
Query: 518 PISRELGPPAGY 553
PI +++G G+
Sbjct: 91 PIPKKIGCLKGW 102
>SB_58074| Best HMM Match : CBM_14 (HMM E-Value=2.7e-14)
Length = 480
Score = 36.7 bits (81), Expect = 0.016
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = +2
Query: 131 YPVSGSCDRYIECINGTAEEKLCPDGLRYN 220
Y CD YI C NG A E CP GL +N
Sbjct: 344 YAHPSKCDMYITCSNGIAHEMPCPAGLNWN 373
Score = 32.7 bits (71), Expect = 0.27
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +2
Query: 362 CSGFRNCVNGVGYDFVCPDGLAFNSETYRCE 454
C + C NG+ ++ CP GL +N T C+
Sbjct: 350 CDMYITCSNGIAHEMPCPAGLNWNDVTKECD 380
>SB_2441| Best HMM Match : CBM_14 (HMM E-Value=2.1e-09)
Length = 98
Score = 35.9 bits (79), Expect = 0.029
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = +2
Query: 350 DARNCSGFRNCVNGVGYDFVCPDGLAFNSETYRCEWPDE 466
D +N S F C NGV + C GL FN + CE PD+
Sbjct: 17 DEKNPSKFVICYNGVREERECAKGLVFNPKEKICEQPDQ 55
Score = 31.1 bits (67), Expect = 0.81
Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Frame = +2
Query: 155 RYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQ---YPNEVPCLERSSLQPPQPTELCPH 325
+++ C NG EE+ C GL +NP P Q P +V + +P+ +
Sbjct: 23 KFVICYNGVREERECAKGLVFNPKEKICEQPDQRYTKPKKVGRKSKLVENAQEPSHMAER 82
Query: 326 QFGYFKL 346
+FK+
Sbjct: 83 MKEFFKI 89
>SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1831
Score = 33.1 bits (72), Expect = 0.20
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +2
Query: 350 DARNCSGFRNCVNGVGYDFV--CPDGLAFNSETYRCEWPDEVADCD 481
D R+CS F C + F+ CP GL ++ + C+WP V DCD
Sbjct: 1148 DPRDCSRFYQC-DAFHKTFLHRCPAGLKWSVKKTACDWPRYV-DCD 1191
Score = 32.7 bits (71), Expect = 0.27
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +2
Query: 350 DARNCSGFRNCVNGVGYDFV--CPDGLAFNSETYRCEWPDEVADCD 481
D R+CS F C + F+ CP GL ++ + C+WP V DCD
Sbjct: 898 DPRDCSKFYQC-DAFHRAFLHRCPAGLKWSVKKTACDWPRYV-DCD 941
Score = 32.7 bits (71), Expect = 0.27
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +2
Query: 350 DARNCSGFRNCVNGVGYDFV--CPDGLAFNSETYRCEWPDEVADCD 481
D R+CS F C + F+ CP GL ++ + C+WP V DCD
Sbjct: 1248 DPRDCSRFYQC-DAFHRAFLHRCPAGLKWSVKKTACDWPRYV-DCD 1291
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +2
Query: 350 DARNCSGFRNC-VNGVGYDFVCPDGLAFNSETYRCEWPDEVADCD 481
D R+CS F C + + CPDGL ++ + C+ P V DCD
Sbjct: 1353 DPRDCSRFYQCDASHKTFLHRCPDGLKWSVKKTACDLPLYV-DCD 1396
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +2
Query: 350 DARNCSGFRNCVNGVGYDFV--CPDGLAFNSETYRCEWPDEVADCD 481
D +CS F C + F+ CP GL ++ + C+WP V DCD
Sbjct: 1003 DPMDCSRFYQC-DAFHRAFLHRCPAGLKWSVKKTTCDWPRYV-DCD 1046
>SB_11257| Best HMM Match : GCC2_GCC3 (HMM E-Value=2.7e-11)
Length = 3810
Score = 32.3 bits (70), Expect = 0.35
Identities = 50/178 (28%), Positives = 64/178 (35%), Gaps = 7/178 (3%)
Frame = +2
Query: 131 YPVSGSCDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPC-QYPNEVPCLE---RSSLQP 298
Y +G C C GTAE + CP G N + C + C + S P
Sbjct: 708 YTDAGPCPAGFYCPLGTAEPEKCPPGTFSNITKRSALEQCTNCTSGFYCGDYNLTSVTAP 767
Query: 299 PQPTELCPHQFGYFKLGDARNCSGFRNCVNGVGYDFVCPDGLAFNSETYRCEWPDEVADC 478
Q CP G + D C C G G CP G N R E + +C
Sbjct: 768 CQAGYYCPS--GASR-PDWIECPPGSYCGEGSGAPERCPRGTFRNIS--RAESVRDCYNC 822
Query: 479 DAEAFLGFRCPEVPISRELGPPAGYRYYRSDNNCQ---KYFLCIDGHPRVLYCGGESA 643
A G+ C ++R GP A RYY N + F C GH +C G +A
Sbjct: 823 TA----GYYCDAEGLTRVAGPCA-ERYYCPGANTRPDPPEFNCTIGH----FCPGANA 871
>SB_41623| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1604
Score = 32.3 bits (70), Expect = 0.35
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = +2
Query: 107 QCRELNERYPVSGSCDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVP 271
+CR+ + ++P + + YIEC N + CPD + + N + CQ P +P
Sbjct: 419 ECRKPSGKFPDPSNINGYIECKNNIPKRVDCPD---VHQHWNDTLKTCQDPPAIP 470
>SB_55021| Best HMM Match : EGF_CA (HMM E-Value=1.4013e-45)
Length = 348
Score = 31.9 bits (69), Expect = 0.47
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +2
Query: 380 CVNGVG-YDFVCPDGLAFNSETYRCEWPDEVADCD 481
C+N G Y CP G+++N T CE DE A D
Sbjct: 127 CINTPGSYKCECPSGMSYNHGTGTCEDKDECASPD 161
>SB_32719| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 31.1 bits (67), Expect = 0.81
Identities = 41/146 (28%), Positives = 57/146 (39%), Gaps = 13/146 (8%)
Frame = +2
Query: 83 QAPVRPTGQCRELNERYPVSGSCDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPN 262
Q PVR G + R CD EC+NGT E + G + D PC PN
Sbjct: 368 QCPVRYMG----IRCRVDKCDRCDLNAECLNGTCECRSGFVGNGFKCTATED--PC-IPN 420
Query: 263 EVPCLERSSLQPPQPTEL----CPHQFGYFKLGDARNCSGFRNCVN-GVGYDF-----VC 412
PC +P ++ CP F + ++ R C+N G+ D
Sbjct: 421 --PCENGGICRPGHGGKVFDCSCPSGFDGMRCEVTKSACKARPCLNGGICVDLTNDNGTL 478
Query: 413 PDGLAF-NSETYRCEWPDEVA--DCD 481
DG+ F N+ +RC P A +CD
Sbjct: 479 LDGVIFLNTSDFRCVCPKGYAGINCD 504
>SB_47132| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 225
Score = 31.1 bits (67), Expect = 0.81
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +2
Query: 350 DARNCSGFRNCVNGVGYDFVCPDGLAFNSETYRCEWPDEVADC 478
D C G+ +CV+G Y CP G + + C P +DC
Sbjct: 182 DTSRCDGYVSCVSGYIYYMPCPAGTQWKNAEDACVDP-SASDC 223
Score = 29.9 bits (64), Expect = 1.9
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +2
Query: 131 YPVSGSCDRYIECINGTAEEKLCPDGLRY 217
YP + CD Y+ C++G CP G ++
Sbjct: 180 YPDTSRCDGYVSCVSGYIYYMPCPAGTQW 208
>SB_41624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 917
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +2
Query: 317 CPHQFGYFKLGDARNCSGFRNCVNGVGYDFVCPDGLAFNSETYRCEWP 460
C G F D N +G+ +CV+GVG C DGL + ++ C+ P
Sbjct: 172 CKSPDGMF--ADPYNEAGYIHCVSGVGKRVNCGDGLVWEKKS--CQKP 215
>SB_9611| Best HMM Match : p450 (HMM E-Value=1.1e-05)
Length = 278
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Frame = +2
Query: 98 PTGQCRELNERYPVSG-SCDRYIECINGTAEEKLCPDGLRYNPNVNFD-VYPCQYPNEVP 271
P +L P+ +CD Y+E I AE + D ++ NP + D + C + E
Sbjct: 41 PNFSAHKLKSMVPLMNKACDVYMEKITRAAETRATIDVMKINPALTLDIIISCAFGVESD 100
Query: 272 C 274
C
Sbjct: 101 C 101
>SB_45927| Best HMM Match : WD40 (HMM E-Value=9e-18)
Length = 1764
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +2
Query: 245 PCQYPNEVPCLERSSLQPPQPTELCPHQFGYFKL 346
P + N + L RSS PPQP L HQ+ KL
Sbjct: 855 PYEVENSLGHLVRSSRVPPQPLMLSRHQYNLRKL 888
>SB_30749| Best HMM Match : FARP (HMM E-Value=0.032)
Length = 2565
Score = 29.5 bits (63), Expect = 2.5
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = -3
Query: 500 IRGKLQHRSRRLHQAIRSGRSQN*KPVRRDIQNRSLHRSRSF*IRCNCGRR 348
IR KL+HR + + R RS+ K +RR ++ R RSR GRR
Sbjct: 1837 IRRKLRHRRQVNRRRRRRQRSRRRKAIRRILRRRFGRRSRRINRHGRLGRR 1887
>SB_15410| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1147
Score = 29.5 bits (63), Expect = 2.5
Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
Frame = +2
Query: 380 CVNGVG-YDFVCPDGLAFNSETYRCEWPDEVADCDAEAFLGFRCPEVPISRELGPPAGYR 556
C N +G Y CP GL + + +C+ DE A+ L +C S P G
Sbjct: 918 CQNTIGSYICTCPKGLRHDPSSGKCKDIDECAEYHHLCGLKGQCVNTVGSYRCNCPPGID 977
Query: 557 YYRSDNNC 580
R N C
Sbjct: 978 LDRKTNMC 985
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +2
Query: 380 CVNGVG-YDFVCPDGLAFNSETYRCEWPDEVAD 475
C N +G Y VCPDG+ + CE +E +D
Sbjct: 188 CYNTMGSYKCVCPDGMELMKDGVSCEDKNECSD 220
>SB_10280| Best HMM Match : F-box (HMM E-Value=5.2e-09)
Length = 438
Score = 29.1 bits (62), Expect = 3.3
Identities = 16/71 (22%), Positives = 33/71 (46%)
Frame = +3
Query: 6 FAPLFTHKHSTSLLDRQIASKISTRNKHPSGLLDNAGN*TKGIQCPEAATDILNASMEPL 185
FAP T +H+ + + + I+TR + +G + +GN + I P ++ ++ P
Sbjct: 122 FAPGVTGRHAVNFQKKSPSGNINTRKPYKTGNIHLSGNDSDSI--PSTSSQSFTETLSPR 179
Query: 186 KRNYAPMVSVT 218
+ P +T
Sbjct: 180 RDQKQPREYIT 190
>SB_19418| Best HMM Match : Mucin (HMM E-Value=0.024)
Length = 1213
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = -1
Query: 121 QFPALSSRPDGCLFLVLILEAICLSKRLVLCLCVNKGAK 5
QF SS PD L ++L+ A+ + ++ C C+ GA+
Sbjct: 955 QFITKSSMPDSTLIIILVSVAVGVILLVLACCCLCCGAR 993
>SB_14427| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 2325
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +2
Query: 89 PVRPTGQCRELNERYPVSGSCDRYIECINGTAEEKLCPD 205
P RP G+C +L Y + CD C+ GT K C D
Sbjct: 2209 PCRPGGECTDLVNNYTCAYFCDD-DPCVPGTT--KFCSD 2244
>SB_6742| Best HMM Match : EGF_CA (HMM E-Value=5.40004e-41)
Length = 653
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +2
Query: 377 NCVNGVG-YDFVCPDGLAFNSETYRCEWPDEVAD 475
NC N +G Y CP G + N+E +C DE A+
Sbjct: 468 NCKNTLGSYKCQCPLGYSMNNEMKKCVDRDECAE 501
>SB_21134| Best HMM Match : PAN (HMM E-Value=0.0002)
Length = 518
Score = 28.3 bits (60), Expect = 5.7
Identities = 37/164 (22%), Positives = 61/164 (37%), Gaps = 7/164 (4%)
Frame = +2
Query: 170 INGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVPCLERSSLQPPQPTELCPHQF------ 331
++G + ++ PD R N + FD YP + ++ + L P ++
Sbjct: 355 VSGGRDRRI-PDLTRANQSARFDGYPTPEKIRILKSPMATSKIIMSIILLPWRYVNAEVC 413
Query: 332 -GYFKLGDARNCSGFRNCVNGVGYDFVCPDGLAFNSETYRCEWPDEVADCDAEAFLGFRC 508
G+FK+ ++ V D CP NS Y + + + C+ F
Sbjct: 414 DGFFKMTNSMLQGHVIGTVTTTEKD--CPVICKRNSACYSINYIRKKSQCELNGDTHFAF 471
Query: 509 PEVPISRELGPPAGYRYYRSDNNCQKYFLCIDGHPRVLYCGGES 640
PE IS P A Y + NC F C G + GG++
Sbjct: 472 PEHFISGR-APAAYYAIVKPVTNCSNMF-CSSGMACKMQEGGKT 513
>SB_28593| Best HMM Match : CUB (HMM E-Value=1.3e-14)
Length = 327
Score = 28.3 bits (60), Expect = 5.7
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -1
Query: 529 STYWYFGATESEESFSIAVGDF 464
S YW FG++ S + + IA+ DF
Sbjct: 129 SCYWRFGSSASSKGYKIAIMDF 150
>SB_40933| Best HMM Match : DUF548 (HMM E-Value=1.7)
Length = 682
Score = 27.9 bits (59), Expect = 7.6
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +3
Query: 249 ASTLTKCR--VSNDPRYSHRNRQNCVPINSDTSN*ATPAIAADSETA*TV*ATILYVPTD 422
A+TL R + RY HRN NC I+ ++S+ P+ A + + AT+L P +
Sbjct: 66 AATLWSRRPLICRSRRYRHRNGHNC-SISRNSSSEICPSCRALETSLSSCLATLLVRPLE 124
Query: 423 WLSILRPT 446
+ PT
Sbjct: 125 TIPAPAPT 132
>SB_3108| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 631
Score = 27.9 bits (59), Expect = 7.6
Identities = 26/117 (22%), Positives = 43/117 (36%), Gaps = 3/117 (2%)
Frame = +2
Query: 110 CRELNERYPVSGSCDRYIECINGTAEEK-LCPDGLRYNPNVNFDVYPCQYPNEVPCLERS 286
C +++E +CD+ +C N +C G + D+ C + C + +
Sbjct: 276 CTDIDECVTGDHTCDKNAKCNNTIGSYHCMCNPGFSGDGRECTDIDEC-VTGDHTCDKNA 334
Query: 287 SLQPPQPTELCPHQFGYFKLGDARNCSGFRNCVNGVGYDFVCPDGLAFNSE--TYRC 451
+ C G+ GD RNC+ CV G D C N+ +Y C
Sbjct: 335 KCNNIIGSYHCTCNPGFS--GDGRNCTDIDECVTG---DHTCDKNAKCNNTIGSYHC 386
Score = 27.9 bits (59), Expect = 7.6
Identities = 26/117 (22%), Positives = 43/117 (36%), Gaps = 3/117 (2%)
Frame = +2
Query: 110 CRELNERYPVSGSCDRYIECINGTAEEK-LCPDGLRYNPNVNFDVYPCQYPNEVPCLERS 286
C +++E +CD+ +C N +C G + D+ C + C + +
Sbjct: 399 CTDIDECVTGDHTCDKNAKCNNTIGSYHCMCNPGFSGDGRECTDIDEC-VTGDHTCDKNA 457
Query: 287 SLQPPQPTELCPHQFGYFKLGDARNCSGFRNCVNGVGYDFVCPDGLAFNSE--TYRC 451
+ C G+ GD RNC+ CV G D C N+ +Y C
Sbjct: 458 KCNNIIGSYHCTCNPGFS--GDGRNCTDIDECVTG---DHTCDKNAKCNNTIGSYHC 509
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,924,392
Number of Sequences: 59808
Number of extensions: 529180
Number of successful extensions: 1549
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1293
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1520
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1657237625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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