Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0162
         (719 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         27   0.77 
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          26   1.4  
AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.          25   2.4  
AY313948-1|AAP76391.1|  424|Anopheles gambiae cytochrome P450 CY...    25   3.1  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    25   3.1  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    24   4.1  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    23   9.5  

>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 26.6 bits (56), Expect = 0.77
 Identities = 14/43 (32%), Positives = 19/43 (44%)
 Frame = +1

Query: 514 HHHQQPTVVHCWT*ASPNPHH*ARSAALLIHFLPATVRRSSYH 642
           HHHQ P + H      P+ HH A      +H+ PA      +H
Sbjct: 121 HHHQHPHLPHVQQ-HHPSVHHPAHHP---LHYQPAAAAAMHHH 159


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = +3

Query: 552 IGLSQSTPLSPVCGSPHPLLAGHRAEVIVPPSQGASHVTS 671
           IG   +T L P+   P P+LA H     +P  Q  +  TS
Sbjct: 562 IGSGSTTRLPPL-HQPFPMLANHAGGGAIPEGQEPTSTTS 600


>AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.
          Length = 356

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 555 GLSQSTPLSPVCGSPHPLLAGH 620
           G  Q  P   +CG+ +P+L GH
Sbjct: 7   GARQILPEDSLCGASYPILNGH 28


>AY313948-1|AAP76391.1|  424|Anopheles gambiae cytochrome P450
           CYP6M4 protein.
          Length = 424

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +3

Query: 249 PNLESRTIVEHVFGRSRYNLK 311
           P+ E R + + +FGRSR NL+
Sbjct: 141 PDAEFRVMGKKIFGRSRSNLQ 161


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = +2

Query: 71  DQGIHPTSCFCSQEISIRNKIQFIKVLQLYVIT 169
           D+ +H  SC     +S+ NK++ I    + ++T
Sbjct: 805 DKFLHRVSCILKSFLSVGNKVKAINTFAVALLT 837


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = +3

Query: 225 DNVISYIKPNLESRTI 272
           DNVISYIK   +S TI
Sbjct: 65  DNVISYIKNGKDSATI 80


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +2

Query: 527 SPQSSTAGHRPLPIHTTEPGLRLSSSTSC 613
           SP ++      LP+    P + L+SS+SC
Sbjct: 164 SPAAAVRSDSSLPMRHYVPHISLNSSSSC 192


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 756,134
Number of Sequences: 2352
Number of extensions: 15094
Number of successful extensions: 27
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)