Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0162
         (719 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075222-1|AAL68089.1|  390|Drosophila melanogaster AT17410p pro...    30   2.8  
AE014134-2867|AAF53630.2|  390|Drosophila melanogaster CG7094-PA...    30   2.8  
AF220354-1|AAF32356.1| 1931|Drosophila melanogaster mitotic kine...    29   8.4  
AF124300-1|AAD42059.1|  945|Drosophila melanogaster putative vol...    29   8.4  
AE014134-2054|AAF53089.2| 1931|Drosophila melanogaster CG33694-P...    29   8.4  
AE013599-1867|ABC66058.1| 1290|Drosophila melanogaster CG8585-PB...    29   8.4  
AE013599-1866|ABC66057.1| 1327|Drosophila melanogaster CG8585-PE...    29   8.4  

>AY075222-1|AAL68089.1|  390|Drosophila melanogaster AT17410p
           protein.
          Length = 390

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 19/79 (24%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
 Frame = +2

Query: 101 CSQEISIRNKIQFIKVLQLYVITKPARMCFHTNLPP---LFGVSR*CDKLYQAEFGITYH 271
           C +  S++  +     L + +     R   H ++ P   L G+ R C+KLY  +FG++  
Sbjct: 114 CKRRFSLKTVLMLTDQLLMRIECVHERGFIHRDIKPDNFLMGLDRHCNKLYLIDFGLSKR 173

Query: 272 CRACFWKVAIQSKT*GTLT 328
            +    ++ I  +T   LT
Sbjct: 174 YKDIESEIHIPYRTDRNLT 192


>AE014134-2867|AAF53630.2|  390|Drosophila melanogaster CG7094-PA
           protein.
          Length = 390

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 19/79 (24%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
 Frame = +2

Query: 101 CSQEISIRNKIQFIKVLQLYVITKPARMCFHTNLPP---LFGVSR*CDKLYQAEFGITYH 271
           C +  S++  +     L + +     R   H ++ P   L G+ R C+KLY  +FG++  
Sbjct: 114 CKRRFSLKTVLMLTDQLLMRIECVHERGFIHRDIKPDNFLMGLDRHCNKLYLIDFGLSKR 173

Query: 272 CRACFWKVAIQSKT*GTLT 328
            +    ++ I  +T   LT
Sbjct: 174 YKDIESEIHIPYRTDRNLT 192


>AF220354-1|AAF32356.1| 1931|Drosophila melanogaster mitotic
            kinesin-like motor proteinCENP-ana protein.
          Length = 1931

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 17/56 (30%), Positives = 26/56 (46%)
 Frame = +2

Query: 233  DKLYQAEFGITYHCRACFWKVAIQSKT*GTLTVDCYLFRE*YYAKENSFINSRNQI 400
            DKL Q +  +    RA   ++  +SK  G +T DC   R    A+ N F+  R  +
Sbjct: 1571 DKLEQTKLDLEEQLRAKKVEIDRRSKELGEVTKDCENIRSDLEAQTNDFLKERETL 1626


>AF124300-1|AAD42059.1|  945|Drosophila melanogaster putative
           voltage- and cyclic nucleotide-gated ion channel
           protein.
          Length = 945

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 18/58 (31%), Positives = 24/58 (41%)
 Frame = +3

Query: 516 SSSTAHSRPLLDIGLSQSTPLSPVCGSPHPLLAGHRAEVIVPPSQGASHVTSSAARSP 689
           S+  A  + LL  G  +    S   G     L GHRA V      G+SH   +  +SP
Sbjct: 5   SAVAARQQQLLLNGSLKGKGQSQSQGQSRQTLPGHRASVRSESGSGSSHTIPATGKSP 62


>AE014134-2054|AAF53089.2| 1931|Drosophila melanogaster CG33694-PA,
            isoform A protein.
          Length = 1931

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 17/56 (30%), Positives = 26/56 (46%)
 Frame = +2

Query: 233  DKLYQAEFGITYHCRACFWKVAIQSKT*GTLTVDCYLFRE*YYAKENSFINSRNQI 400
            DKL Q +  +    RA   ++  +SK  G +T DC   R    A+ N F+  R  +
Sbjct: 1571 DKLEQTKLDLEEQLRAKKVEIDRRSKELGEVTKDCENIRSDLEAQTNDFLKERETL 1626


>AE013599-1867|ABC66058.1| 1290|Drosophila melanogaster CG8585-PB,
           isoform B protein.
          Length = 1290

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 18/58 (31%), Positives = 24/58 (41%)
 Frame = +3

Query: 516 SSSTAHSRPLLDIGLSQSTPLSPVCGSPHPLLAGHRAEVIVPPSQGASHVTSSAARSP 689
           S+  A  + LL  G  +    S   G     L GHRA V      G+SH   +  +SP
Sbjct: 355 SAVAARQQQLLLNGSLKGKGQSQSQGQSRQTLPGHRASVRSESGSGSSHTIPATGKSP 412


>AE013599-1866|ABC66057.1| 1327|Drosophila melanogaster CG8585-PE,
           isoform E protein.
          Length = 1327

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 18/58 (31%), Positives = 24/58 (41%)
 Frame = +3

Query: 516 SSSTAHSRPLLDIGLSQSTPLSPVCGSPHPLLAGHRAEVIVPPSQGASHVTSSAARSP 689
           S+  A  + LL  G  +    S   G     L GHRA V      G+SH   +  +SP
Sbjct: 355 SAVAARQQQLLLNGSLKGKGQSQSQGQSRQTLPGHRASVRSESGSGSSHTIPATGKSP 412


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,631,052
Number of Sequences: 53049
Number of extensions: 708784
Number of successful extensions: 2115
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2003
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2114
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3211306956
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)