Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0161
         (639 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    23   1.6  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    23   2.8  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    23   2.8  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    22   5.0  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    22   5.0  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   6.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.6  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   6.6  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    21   6.6  

>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = -1

Query: 258 CKEIYEPCCQIYVPV 214
           C  IYEP CQ Y PV
Sbjct: 33  CPPIYEPSCQ-YSPV 46


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = -1

Query: 312 LLNNIGGSSFQIISPSHPCKEIYEPCCQIYVPVPQFVCPII 190
           LL +IG S F ++  ++    +       +V VP  VCPI+
Sbjct: 255 LLVSIGVSLFDVLFQAYYLYYVATGKAS-FVTVPMIVCPIV 294


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = -1

Query: 312 LLNNIGGSSFQIISPSHPCKEIYEPCCQIYVPVPQFVCPII 190
           LL +IG S F ++  ++    +       +V VP  VCPI+
Sbjct: 255 LLVSIGVSLFDVLFQAYYLYYVATGKAS-FVTVPMIVCPIV 294


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +3

Query: 285 NCFHQYY*EEGTKNR 329
           N FHQ+Y  E ++N+
Sbjct: 478 NSFHQFYSSESSQNQ 492


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +3

Query: 285 NCFHQYY*EEGTKNR 329
           N FHQ+Y  E ++N+
Sbjct: 426 NSFHQFYSSESSQNQ 440


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = +1

Query: 127 GMANAFTFGEGFHNYHHVFPWDYRADELGDR 219
           G A  +T   G+H +H+ F  +    E  D+
Sbjct: 481 GDAVLYTIHMGYHGFHNPFTCNMCGVECSDK 511


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 10/37 (27%), Positives = 17/37 (45%)
 Frame = +1

Query: 235  TRFIDFFAWMGWAYDLKTASTNIIEKRALRTGDGTYK 345
            TR   F A+    +++KT    +++    R G   YK
Sbjct: 1671 TRAAGFLAYYEICHNIKTQGWTVVQDPNRRMGPYAYK 1707


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -1

Query: 147 SKCICHATLSSFQALIVRFV 88
           +  +CH T+   + L +RFV
Sbjct: 450 NSAVCHQTIELVKMLKIRFV 469


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -1

Query: 147 SKCICHATLSSFQALIVRFV 88
           +  +CH T+   + L +RFV
Sbjct: 175 NSAVCHQTIELVKMLKIRFV 194


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,408
Number of Sequences: 336
Number of extensions: 3282
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16501678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)