Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0161
(639 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC062303-1|AAH62303.1| 359|Homo sapiens stearoyl-CoA desaturase... 121 2e-27
AL139819-4|CAH72824.1| 359|Homo sapiens stearoyl-CoA desaturase... 121 2e-27
AF097514-1|AAD29870.1| 359|Homo sapiens stearoyl-CoA desaturase... 121 2e-27
AB208982-1|BAD92219.1| 366|Homo sapiens stearoyl-CoA desaturase... 121 2e-27
AB032261-1|BAA93510.1| 359|Homo sapiens stearoyl-CoA desaturase... 121 2e-27
BC048971-1|AAH48971.1| 134|Homo sapiens SCD5 protein protein. 119 1e-26
AL831891-1|CAD38567.1| 160|Homo sapiens hypothetical protein pr... 119 1e-26
AF389338-1|AAP31443.1| 330|Homo sapiens acyl-CoA-desaturase pro... 119 1e-26
Y13647-1|CAA73998.1| 359|Homo sapiens stearoyl CoA desaturase p... 118 1e-26
AK222862-1|BAD96582.1| 359|Homo sapiens stearoyl-CoA desaturase... 116 5e-26
BC005807-1|AAH05807.1| 355|Homo sapiens SCD protein protein. 116 7e-26
BC000961-1|AAH00961.1| 323|Homo sapiens degenerative spermatocy... 31 3.4
AY423730-1|AAS00493.1| 323|Homo sapiens migration-inducing gene... 31 3.4
AF466375-1|AAM12531.1| 323|Homo sapiens sphingolipid delta 4 de... 31 3.4
AF002668-1|AAB62238.1| 323|Homo sapiens MLD protein. 31 3.4
D79991-1|BAA11486.1| 1745|Homo sapiens KIAA0169 protein protein. 30 6.0
BX537774-1|CAD97835.1| 1639|Homo sapiens hypothetical protein pr... 30 6.0
BC111045-1|AAI11046.1| 974|Homo sapiens NUP188 protein protein. 30 6.0
BC040352-1|AAH40352.1| 1293|Homo sapiens NUP188 protein protein. 30 6.0
AL672142-10|CAI10845.1| 1749|Homo sapiens nucleoporin 188kDa pro... 30 6.0
AL592211-4|CAI12368.1| 1749|Homo sapiens nucleoporin 188kDa prot... 30 6.0
>BC062303-1|AAH62303.1| 359|Homo sapiens stearoyl-CoA desaturase
(delta-9-desaturase) protein.
Length = 359
Score = 121 bits (291), Expect = 2e-27
Identities = 60/115 (52%), Positives = 74/115 (64%)
Frame = +1
Query: 1 NNAWHITVLRYIFSLNGTFLVNSAAHLWGYKPYDKSLKATQSGMANAFTFGEGFHNYHHV 180
N+ + T LRY LN T+LVNSAAHL+GY+PYDK++ ++ + + GEGFHNYHH
Sbjct: 244 NSVFVATFLRYAVVLNATWLVNSAAHLFGYRPYDKNISPRENILVSLGAVGEGFHNYHHS 303
Query: 181 FPWDYRADELGDRYINLTTRFIDFFAWMGWAYDLKTASTNIIEKRALRTGDGTYK 345
FP+DY A E +IN TT FID A +G AYD K S I R RTGDG YK
Sbjct: 304 FPYDYSASEY-RWHINFTTFFIDCMAALGLAYDRKKVSKAAILARIKRTGDGNYK 357
>AL139819-4|CAH72824.1| 359|Homo sapiens stearoyl-CoA desaturase
(delta-9-desaturase) protein.
Length = 359
Score = 121 bits (291), Expect = 2e-27
Identities = 60/115 (52%), Positives = 74/115 (64%)
Frame = +1
Query: 1 NNAWHITVLRYIFSLNGTFLVNSAAHLWGYKPYDKSLKATQSGMANAFTFGEGFHNYHHV 180
N+ + T LRY LN T+LVNSAAHL+GY+PYDK++ ++ + + GEGFHNYHH
Sbjct: 244 NSVFVATFLRYAVVLNATWLVNSAAHLFGYRPYDKNISPRENILVSLGAVGEGFHNYHHS 303
Query: 181 FPWDYRADELGDRYINLTTRFIDFFAWMGWAYDLKTASTNIIEKRALRTGDGTYK 345
FP+DY A E +IN TT FID A +G AYD K S I R RTGDG YK
Sbjct: 304 FPYDYSASEY-RWHINFTTFFIDCMAALGLAYDRKKVSKAAILARIKRTGDGNYK 357
>AF097514-1|AAD29870.1| 359|Homo sapiens stearoyl-CoA desaturase
protein.
Length = 359
Score = 121 bits (291), Expect = 2e-27
Identities = 60/115 (52%), Positives = 74/115 (64%)
Frame = +1
Query: 1 NNAWHITVLRYIFSLNGTFLVNSAAHLWGYKPYDKSLKATQSGMANAFTFGEGFHNYHHV 180
N+ + T LRY LN T+LVNSAAHL+GY+PYDK++ ++ + + GEGFHNYHH
Sbjct: 244 NSVFVATFLRYAVVLNATWLVNSAAHLFGYRPYDKNISPRENILVSLGAVGEGFHNYHHS 303
Query: 181 FPWDYRADELGDRYINLTTRFIDFFAWMGWAYDLKTASTNIIEKRALRTGDGTYK 345
FP+DY A E +IN TT FID A +G AYD K S I R RTGDG YK
Sbjct: 304 FPYDYSASEY-RWHINFTTFFIDCMAALGLAYDRKKVSKAAILARIKRTGDGNYK 357
>AB208982-1|BAD92219.1| 366|Homo sapiens stearoyl-CoA desaturase
variant protein.
Length = 366
Score = 121 bits (291), Expect = 2e-27
Identities = 60/115 (52%), Positives = 74/115 (64%)
Frame = +1
Query: 1 NNAWHITVLRYIFSLNGTFLVNSAAHLWGYKPYDKSLKATQSGMANAFTFGEGFHNYHHV 180
N+ + T LRY LN T+LVNSAAHL+GY+PYDK++ ++ + + GEGFHNYHH
Sbjct: 251 NSVFVATFLRYAVVLNATWLVNSAAHLFGYRPYDKNISPRENILVSLGAVGEGFHNYHHS 310
Query: 181 FPWDYRADELGDRYINLTTRFIDFFAWMGWAYDLKTASTNIIEKRALRTGDGTYK 345
FP+DY A E +IN TT FID A +G AYD K S I R RTGDG YK
Sbjct: 311 FPYDYSASEY-RWHINFTTFFIDCMAALGLAYDRKKVSKAAILARIKRTGDGNYK 364
>AB032261-1|BAA93510.1| 359|Homo sapiens stearoyl-CoA desaturase
protein.
Length = 359
Score = 121 bits (291), Expect = 2e-27
Identities = 60/115 (52%), Positives = 74/115 (64%)
Frame = +1
Query: 1 NNAWHITVLRYIFSLNGTFLVNSAAHLWGYKPYDKSLKATQSGMANAFTFGEGFHNYHHV 180
N+ + T LRY LN T+LVNSAAHL+GY+PYDK++ ++ + + GEGFHNYHH
Sbjct: 244 NSVFVATFLRYAVVLNATWLVNSAAHLFGYRPYDKNISPRENILVSLGAVGEGFHNYHHS 303
Query: 181 FPWDYRADELGDRYINLTTRFIDFFAWMGWAYDLKTASTNIIEKRALRTGDGTYK 345
FP+DY A E +IN TT FID A +G AYD K S I R RTGDG YK
Sbjct: 304 FPYDYSASEY-RWHINFTTFFIDCMAALGLAYDRKKVSKAAILARIKRTGDGNYK 357
>BC048971-1|AAH48971.1| 134|Homo sapiens SCD5 protein protein.
Length = 134
Score = 119 bits (286), Expect = 1e-26
Identities = 56/113 (49%), Positives = 74/113 (65%)
Frame = +1
Query: 1 NNAWHITVLRYIFSLNGTFLVNSAAHLWGYKPYDKSLKATQSGMANAFTFGEGFHNYHHV 180
N+ + ++LRY SLN ++LVNSAAH++G +PYDK + Q+ + GEGFHNYHH
Sbjct: 22 NSYFLASILRYTISLNISWLVNSAAHMYGNRPYDKHISPRQNPLVALGAIGEGFHNYHHT 81
Query: 181 FPWDYRADELGDRYINLTTRFIDFFAWMGWAYDLKTASTNIIEKRALRTGDGT 339
FP+DY A E G + N TT FIDF W+G A D K A+ +IE R RTGD +
Sbjct: 82 FPFDYSASEFGLNF-NPTTWFIDFMCWLGLATDRKRATKPMIEARKARTGDSS 133
>AL831891-1|CAD38567.1| 160|Homo sapiens hypothetical protein
protein.
Length = 160
Score = 119 bits (286), Expect = 1e-26
Identities = 56/113 (49%), Positives = 74/113 (65%)
Frame = +1
Query: 1 NNAWHITVLRYIFSLNGTFLVNSAAHLWGYKPYDKSLKATQSGMANAFTFGEGFHNYHHV 180
N+ + ++LRY SLN ++LVNSAAH++G +PYDK + Q+ + GEGFHNYHH
Sbjct: 48 NSYFLASILRYTISLNISWLVNSAAHMYGNRPYDKHISPRQNPLVALGAIGEGFHNYHHT 107
Query: 181 FPWDYRADELGDRYINLTTRFIDFFAWMGWAYDLKTASTNIIEKRALRTGDGT 339
FP+DY A E G + N TT FIDF W+G A D K A+ +IE R RTGD +
Sbjct: 108 FPFDYSASEFGLNF-NPTTWFIDFMCWLGLATDRKRATKPMIEARKARTGDSS 159
>AF389338-1|AAP31443.1| 330|Homo sapiens acyl-CoA-desaturase
protein.
Length = 330
Score = 119 bits (286), Expect = 1e-26
Identities = 56/113 (49%), Positives = 74/113 (65%)
Frame = +1
Query: 1 NNAWHITVLRYIFSLNGTFLVNSAAHLWGYKPYDKSLKATQSGMANAFTFGEGFHNYHHV 180
N+ + ++LRY SLN ++LVNSAAH++G +PYDK + Q+ + GEGFHNYHH
Sbjct: 218 NSYFLASILRYTISLNISWLVNSAAHMYGNRPYDKHISPRQNPLVALGAIGEGFHNYHHT 277
Query: 181 FPWDYRADELGDRYINLTTRFIDFFAWMGWAYDLKTASTNIIEKRALRTGDGT 339
FP+DY A E G + N TT FIDF W+G A D K A+ +IE R RTGD +
Sbjct: 278 FPFDYSASEFGLNF-NPTTWFIDFMCWLGLATDRKRATKPMIEARKARTGDSS 329
>Y13647-1|CAA73998.1| 359|Homo sapiens stearoyl CoA desaturase
protein.
Length = 359
Score = 118 bits (285), Expect = 1e-26
Identities = 58/115 (50%), Positives = 73/115 (63%)
Frame = +1
Query: 1 NNAWHITVLRYIFSLNGTFLVNSAAHLWGYKPYDKSLKATQSGMANAFTFGEGFHNYHHV 180
N+ + T LRY LN T+LVNSAAHL+GY+PYDK++ ++ + + GEGFHNYHH
Sbjct: 244 NSVFVATFLRYAVVLNATWLVNSAAHLFGYRPYDKNISPRENILVSLGAVGEGFHNYHHS 303
Query: 181 FPWDYRADELGDRYINLTTRFIDFFAWMGWAYDLKTASTNIIEKRALRTGDGTYK 345
FP+DY A E +IN T FID+ A +G YD K S I R RTGDG YK
Sbjct: 304 FPYDYSASEY-RWHINFNTFFIDWMAALGLTYDRKKVSKAAILARIKRTGDGNYK 357
>AK222862-1|BAD96582.1| 359|Homo sapiens stearoyl-CoA desaturase
variant protein.
Length = 359
Score = 116 bits (280), Expect = 5e-26
Identities = 59/115 (51%), Positives = 73/115 (63%)
Frame = +1
Query: 1 NNAWHITVLRYIFSLNGTFLVNSAAHLWGYKPYDKSLKATQSGMANAFTFGEGFHNYHHV 180
N+ + T LRY LN T+LVNSAA L+GY+PYDK++ ++ + + GEGFHNYHH
Sbjct: 244 NSVFVATFLRYAVVLNATWLVNSAALLFGYRPYDKNISPRENILVSLGAVGEGFHNYHHS 303
Query: 181 FPWDYRADELGDRYINLTTRFIDFFAWMGWAYDLKTASTNIIEKRALRTGDGTYK 345
FP+DY A E +IN TT FID A +G AYD K S I R RTGDG YK
Sbjct: 304 FPYDYSASEY-RWHINFTTFFIDCMAALGLAYDRKKVSKAAILARIKRTGDGNYK 357
>BC005807-1|AAH05807.1| 355|Homo sapiens SCD protein protein.
Length = 355
Score = 116 bits (279), Expect = 7e-26
Identities = 58/112 (51%), Positives = 72/112 (64%)
Frame = +1
Query: 1 NNAWHITVLRYIFSLNGTFLVNSAAHLWGYKPYDKSLKATQSGMANAFTFGEGFHNYHHV 180
N+ + T LRY LN T+LVNSAAHL+GY+PYDK++ ++ + + GEGFHNYHH
Sbjct: 244 NSVFVATFLRYAVVLNATWLVNSAAHLFGYRPYDKNISPRENILVSLGAVGEGFHNYHHS 303
Query: 181 FPWDYRADELGDRYINLTTRFIDFFAWMGWAYDLKTASTNIIEKRALRTGDG 336
FP+DY A E +IN TT FID A +G AYD K S I R RTGDG
Sbjct: 304 FPYDYSASEY-RWHINFTTFFIDCMAALGLAYDRKKVSKAAILARIKRTGDG 354
>BC000961-1|AAH00961.1| 323|Homo sapiens degenerative spermatocyte
homolog 1, lipid desaturase (Drosophila) protein.
Length = 323
Score = 31.1 bits (67), Expect = 3.4
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +1
Query: 43 LNGTFLVNSAAHLWGYKPYDKSLKATQSGMANAFTFGEGFHNYHHVFP 186
++G F+ L G++ Y + G N TF G+HN HH FP
Sbjct: 225 ISGHFIAEHYMFLKGHETY------SYYGPLNLLTFNVGYHNEHHDFP 266
>AY423730-1|AAS00493.1| 323|Homo sapiens migration-inducing gene 15
protein protein.
Length = 323
Score = 31.1 bits (67), Expect = 3.4
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +1
Query: 43 LNGTFLVNSAAHLWGYKPYDKSLKATQSGMANAFTFGEGFHNYHHVFP 186
++G F+ L G++ Y + G N TF G+HN HH FP
Sbjct: 225 ISGHFIAEHYMFLKGHETY------SYYGPLNLLTFNVGYHNEHHDFP 266
>AF466375-1|AAM12531.1| 323|Homo sapiens sphingolipid delta 4
desaturase protein DES1 protein.
Length = 323
Score = 31.1 bits (67), Expect = 3.4
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +1
Query: 43 LNGTFLVNSAAHLWGYKPYDKSLKATQSGMANAFTFGEGFHNYHHVFP 186
++G F+ L G++ Y + G N TF G+HN HH FP
Sbjct: 225 ISGHFIAEHYMFLKGHETY------SYYGPLNLLTFNVGYHNEHHDFP 266
>AF002668-1|AAB62238.1| 323|Homo sapiens MLD protein.
Length = 323
Score = 31.1 bits (67), Expect = 3.4
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +1
Query: 43 LNGTFLVNSAAHLWGYKPYDKSLKATQSGMANAFTFGEGFHNYHHVFP 186
++G F+ L G++ Y + G N TF G+HN HH FP
Sbjct: 225 ISGHFIAEHYMFLKGHETY------SYYGPLNLLTFNVGYHNEHHDFP 266
>D79991-1|BAA11486.1| 1745|Homo sapiens KIAA0169 protein protein.
Length = 1745
Score = 30.3 bits (65), Expect = 6.0
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +3
Query: 339 LQTTKWNELKQSSKSFFA*YHFFDDFCKVIQKQASGISYYNNSYLL 476
L T ++ LK SK+ A HF D C+++ Q+ ++ YN + L
Sbjct: 1543 LHTVQYGLLKILSKTLAALRHFTPDVCQILLDQSLDLAEYNFLFAL 1588
>BX537774-1|CAD97835.1| 1639|Homo sapiens hypothetical protein
protein.
Length = 1639
Score = 30.3 bits (65), Expect = 6.0
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +3
Query: 339 LQTTKWNELKQSSKSFFA*YHFFDDFCKVIQKQASGISYYNNSYLL 476
L T ++ LK SK+ A HF D C+++ Q+ ++ YN + L
Sbjct: 1437 LHTVQYGLLKILSKTLAALRHFTPDVCQILLDQSLDLAEYNFLFAL 1482
>BC111045-1|AAI11046.1| 974|Homo sapiens NUP188 protein protein.
Length = 974
Score = 30.3 bits (65), Expect = 6.0
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +3
Query: 339 LQTTKWNELKQSSKSFFA*YHFFDDFCKVIQKQASGISYYNNSYLL 476
L T ++ LK SK+ A HF D C+++ Q+ ++ YN + L
Sbjct: 772 LHTVQYGLLKILSKTLAALRHFTPDVCQILLDQSLDLAEYNFLFAL 817
>BC040352-1|AAH40352.1| 1293|Homo sapiens NUP188 protein protein.
Length = 1293
Score = 30.3 bits (65), Expect = 6.0
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +3
Query: 339 LQTTKWNELKQSSKSFFA*YHFFDDFCKVIQKQASGISYYNNSYLL 476
L T ++ LK SK+ A HF D C+++ Q+ ++ YN + L
Sbjct: 1091 LHTVQYGLLKILSKTLAALRHFTPDVCQILLDQSLDLAEYNFLFAL 1136
>AL672142-10|CAI10845.1| 1749|Homo sapiens nucleoporin 188kDa protein.
Length = 1749
Score = 30.3 bits (65), Expect = 6.0
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +3
Query: 339 LQTTKWNELKQSSKSFFA*YHFFDDFCKVIQKQASGISYYNNSYLL 476
L T ++ LK SK+ A HF D C+++ Q+ ++ YN + L
Sbjct: 1547 LHTVQYGLLKILSKTLAALRHFTPDVCQILLDQSLDLAEYNFLFAL 1592
>AL592211-4|CAI12368.1| 1749|Homo sapiens nucleoporin 188kDa protein.
Length = 1749
Score = 30.3 bits (65), Expect = 6.0
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +3
Query: 339 LQTTKWNELKQSSKSFFA*YHFFDDFCKVIQKQASGISYYNNSYLL 476
L T ++ LK SK+ A HF D C+++ Q+ ++ YN + L
Sbjct: 1547 LHTVQYGLLKILSKTLAALRHFTPDVCQILLDQSLDLAEYNFLFAL 1592
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,220,955
Number of Sequences: 237096
Number of extensions: 1833200
Number of successful extensions: 2627
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 2539
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2616
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7028963750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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