SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0160
         (381 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC101063-1|AAI01064.1|  929|Homo sapiens unc-45 homolog B (C. el...    29   3.8  
BC101062-1|AAI01063.1|  850|Homo sapiens UNC45B protein protein.       29   3.8  
AF539794-1|AAO13384.1|  931|Homo sapiens striated muscle UNC45 p...    29   3.8  

>BC101063-1|AAI01064.1|  929|Homo sapiens unc-45 homolog B (C.
           elegans) protein.
          Length = 929

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 25/95 (26%), Positives = 46/95 (48%)
 Frame = +3

Query: 9   ITDSTTSILQVRMCVLENYLKWRLSIETDEFQKYCKNYMSFKHKPMSDIREALDIAQNVI 188
           +TD+T  +  + +  L + L  R   E D F+K C+ Y++ K  P  D+ + L+  Q V 
Sbjct: 347 LTDNTRMLASILINKLYDDL--RCDPERDHFRKICEEYITGKFDP-QDMDKNLNAIQTV- 402

Query: 189 KFDTEVIRRNGFIISSDPVNTKLILENVESLAGFE 293
                 I +  F + +  +  K ++E + +L G E
Sbjct: 403 ----SGILQGPFDLGNQLLGLKGVMEMMVALCGSE 433


>BC101062-1|AAI01063.1|  850|Homo sapiens UNC45B protein protein.
          Length = 850

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 25/95 (26%), Positives = 46/95 (48%)
 Frame = +3

Query: 9   ITDSTTSILQVRMCVLENYLKWRLSIETDEFQKYCKNYMSFKHKPMSDIREALDIAQNVI 188
           +TD+T  +  + +  L + L  R   E D F+K C+ Y++ K  P  D+ + L+  Q V 
Sbjct: 347 LTDNTRMLASILINKLYDDL--RCDPERDHFRKICEEYITGKFDP-QDMDKNLNAIQTV- 402

Query: 189 KFDTEVIRRNGFIISSDPVNTKLILENVESLAGFE 293
                 I +  F + +  +  K ++E + +L G E
Sbjct: 403 ----SGILQGPFDLGNQLLGLKGVMEMMVALCGSE 433


>AF539794-1|AAO13384.1|  931|Homo sapiens striated muscle UNC45
           protein.
          Length = 931

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 25/95 (26%), Positives = 46/95 (48%)
 Frame = +3

Query: 9   ITDSTTSILQVRMCVLENYLKWRLSIETDEFQKYCKNYMSFKHKPMSDIREALDIAQNVI 188
           +TD+T  +  + +  L + L  R   E D F+K C+ Y++ K  P  D+ + L+  Q V 
Sbjct: 347 LTDNTRMLASILINKLYDDL--RCDPERDHFRKICEEYITGKFDP-QDMDKNLNAIQTV- 402

Query: 189 KFDTEVIRRNGFIISSDPVNTKLILENVESLAGFE 293
                 I +  F + +  +  K ++E + +L G E
Sbjct: 403 ----SGILQGPFDLGNQLLGLKGVMEMMVALCGSE 433


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,695,751
Number of Sequences: 237096
Number of extensions: 937023
Number of successful extensions: 1717
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1706
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1716
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2526356360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -