Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0160
(381 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006631-1|AAF39793.2| 787|Caenorhabditis elegans Hypothetical ... 32 0.16
AC006607-9|AAF60368.2| 995|Caenorhabditis elegans Hypothetical ... 32 0.16
AC024882-7|AAF60924.1| 285|Caenorhabditis elegans Hypothetical ... 30 0.64
Z81567-2|CAB04585.1| 235|Caenorhabditis elegans Hypothetical pr... 29 1.1
Z93381-3|CAB07606.1| 362|Caenorhabditis elegans Hypothetical pr... 29 1.5
U97196-12|AAB52456.2| 564|Caenorhabditis elegans Hypothetical p... 29 1.5
Z75714-3|CAB00060.1| 1149|Caenorhabditis elegans Hypothetical pr... 27 3.4
Z50872-8|CAA90758.1| 865|Caenorhabditis elegans Hypothetical pr... 27 3.4
AL031269-3|CAA20334.1| 865|Caenorhabditis elegans Hypothetical ... 27 3.4
AB055111-1|BAB62292.1| 865|Caenorhabditis elegans VHA-6 protein. 27 3.4
L08403-1|AAA28025.1| 810|Caenorhabditis elegans Hypothetical pr... 27 4.5
U97012-3|AAK39144.2| 588|Caenorhabditis elegans Groundhog (hedg... 26 7.9
>AC006631-1|AAF39793.2| 787|Caenorhabditis elegans Hypothetical
protein F27B3.5 protein.
Length = 787
Score = 31.9 bits (69), Expect = 0.16
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Frame = +3
Query: 33 LQVRMCVLENYLKWRLSIETDEFQK----YCKNYMSFKHKPMSDIREALDIAQNVIK 191
+++ + LE +LK + I TD FQK C + F++ P+ DIR+ N +K
Sbjct: 197 IKILVSQLEPFLKSQCFITTDAFQKIEQEMCNYWKKFENIPVKDIRDVKRFTLNDLK 253
>AC006607-9|AAF60368.2| 995|Caenorhabditis elegans Hypothetical
protein C09E7.7 protein.
Length = 995
Score = 31.9 bits (69), Expect = 0.16
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Frame = +3
Query: 33 LQVRMCVLENYLKWRLSIETDEFQK----YCKNYMSFKHKPMSDIREALDIAQNVIK 191
+++ + LE +LK + I TD FQK C + F++ P+ DIR+ N +K
Sbjct: 404 IKILVSQLEPFLKSQCFITTDAFQKIEQEMCNYWKKFENIPVKDIRDVKRFTLNDLK 460
>AC024882-7|AAF60924.1| 285|Caenorhabditis elegans Hypothetical
protein Y9C9A.12 protein.
Length = 285
Score = 29.9 bits (64), Expect = 0.64
Identities = 18/58 (31%), Positives = 31/58 (53%)
Frame = +3
Query: 123 MSFKHKPMSDIREALDIAQNVIKFDTEVIRRNGFIISSDPVNTKLILENVESLAGFEI 296
++ + P++ IRE LD + + + + RN +S NTK +LENV+ L E+
Sbjct: 3 LTLSNLPVAVIREVLDKLEPIDRLVIRKVSRNLRTVSD---NTKFLLENVKILISNEL 57
>Z81567-2|CAB04585.1| 235|Caenorhabditis elegans Hypothetical
protein K08C9.2 protein.
Length = 235
Score = 29.1 bits (62), Expect = 1.1
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +3
Query: 111 CKNYMSFKHKPMSDIREALDIAQNVI--KFDTEVIRRNGFIISSDPVN 248
C N H+ M + + + +N FDT + NGF++S DP N
Sbjct: 106 CNNEYFLVHQDMIKLVKTVFERKNQADPSFDTICLANNGFVVSDDPEN 153
>Z93381-3|CAB07606.1| 362|Caenorhabditis elegans Hypothetical
protein F28G4.3 protein.
Length = 362
Score = 28.7 bits (61), Expect = 1.5
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 90 TDEFQKYCKNYMSFKHKPMSDIREALDIAQNVIKFDTEV 206
TDE+ KY N+ ++ KP+ + +AL N+ D +V
Sbjct: 165 TDEYPKYVNNWSEYRFKPLI-VAQALKEFPNIWWMDADV 202
>U97196-12|AAB52456.2| 564|Caenorhabditis elegans Hypothetical
protein B0207.1 protein.
Length = 564
Score = 28.7 bits (61), Expect = 1.5
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +3
Query: 33 LQVRMCVLENYLKWRLSIETDEFQKYCKNYMSFKHKPMSDIREALDIAQNVIK 191
L V CVLE ++ + ++ D++ K+ K Y K S + LD A ++ K
Sbjct: 512 LFVHRCVLEYLVQKKYNVNRDDYTKFLKEY-KVAEKISSGNKNYLDTAVDLFK 563
>Z75714-3|CAB00060.1| 1149|Caenorhabditis elegans Hypothetical
protein ZC434.5 protein.
Length = 1149
Score = 27.5 bits (58), Expect = 3.4
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +3
Query: 177 QNVIKFDTEVIRRNGFIISSDPVNTKLILENVES 278
+NV K D I+R GF I P N K L VE+
Sbjct: 661 KNVKKGDIIQIQRKGFYIVDQPYNPKSELSGVET 694
>Z50872-8|CAA90758.1| 865|Caenorhabditis elegans Hypothetical
protein VW02B12L.1 protein.
Length = 865
Score = 27.5 bits (58), Expect = 3.4
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +3
Query: 324 ILKNNYNALLEMKSILE 374
+LKNN+ LLEMK++LE
Sbjct: 117 VLKNNHVQLLEMKAVLE 133
>AL031269-3|CAA20334.1| 865|Caenorhabditis elegans Hypothetical
protein VW02B12L.1 protein.
Length = 865
Score = 27.5 bits (58), Expect = 3.4
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +3
Query: 324 ILKNNYNALLEMKSILE 374
+LKNN+ LLEMK++LE
Sbjct: 117 VLKNNHVQLLEMKAVLE 133
>AB055111-1|BAB62292.1| 865|Caenorhabditis elegans VHA-6 protein.
Length = 865
Score = 27.5 bits (58), Expect = 3.4
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +3
Query: 324 ILKNNYNALLEMKSILE 374
+LKNN+ LLEMK++LE
Sbjct: 117 VLKNNHVQLLEMKAVLE 133
>L08403-1|AAA28025.1| 810|Caenorhabditis elegans Hypothetical
protein F42H10.5 protein.
Length = 810
Score = 27.1 bits (57), Expect = 4.5
Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
Frame = +3
Query: 123 MSFKHKPMSDIREALDIAQNVIK---FDTEVIRRNGFIISSDPVNTKLILENVESLAGFE 293
+S+ S E D+A ++ F R F S +NT LIL N++S FE
Sbjct: 734 LSYWKSCSSRCSELSDLATELLSIPIFTLTAERVLSFSPDSSSLNTNLILTNLDSTDQFE 793
Query: 294 IQDAIKIEPAILKNNYN 344
Q ++ I+ +N
Sbjct: 794 KQVLLRFNRQIVSKLFN 810
>U97012-3|AAK39144.2| 588|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 9 protein.
Length = 588
Score = 26.2 bits (55), Expect = 7.9
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +1
Query: 121 TCLSNINQCQTFEKL*ILHKMLSSSILKLSDAMGLLSHLIR 243
T N+NQ +F K +LH++L I + A + H+I+
Sbjct: 95 TSNKNLNQANSFIKTPVLHQLLIQPIDSSAPASPVQRHIIQ 135
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,623,783
Number of Sequences: 27780
Number of extensions: 169828
Number of successful extensions: 457
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 452
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 457
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 567749674
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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