Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0156
(440 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 68 6e-13
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 59 3e-10
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 55 4e-09
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 54 1e-08
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 54 1e-08
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 50 2e-07
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 48 6e-07
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 43 2e-05
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 42 4e-05
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 39 3e-04
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 39 4e-04
SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|ch... 35 0.005
SPBP19A11.06 |lid2|SPBP4H10.01|Lid2 complex subunit Lid2 |Schizo... 28 0.55
SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharo... 27 0.97
SPAC630.06c |||conserved fungal protein|Schizosaccharomyces pomb... 27 1.7
SPAC11G7.02 |pub1||ubiquitin-protein ligase E3|Schizosaccharomyc... 26 2.2
SPAC31G5.04 |||homoisocitrate dehydrogenase|Schizosaccharomyces ... 25 3.9
SPBC17D1.07c |||GTPase regulator |Schizosaccharomyces pombe|chr ... 25 3.9
SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces pomb... 25 3.9
SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3 |Schizosacc... 25 5.2
SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces... 25 5.2
SPBC29A10.07 |||nucleoporin Pom152|Schizosaccharomyces pombe|chr... 25 6.8
SPBC646.07c |||enoyl reductase|Schizosaccharomyces pombe|chr 2||... 25 6.8
SPAC2F7.16c |||phospholipase D |Schizosaccharomyces pombe|chr 1|... 25 6.8
SPBC17D11.01 |nep1||nedd8 protease Nep1|Schizosaccharomyces pomb... 25 6.8
SPBC1198.01 |||glutathione-dependent formaldehyde dehydrogenase ... 24 9.0
SPCC4B3.03c |||DUF21 domain protein|Schizosaccharomyces pombe|ch... 24 9.0
SPCC285.10c |||SPRY domain protein|Schizosaccharomyces pombe|chr... 24 9.0
SPAC25B8.17 |||peptidase family A22|Schizosaccharomyces pombe|ch... 24 9.0
SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1 |Schizo... 24 9.0
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 68.1 bits (159), Expect = 6e-13
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Frame = +3
Query: 186 ALTAHARSHRSTADAHRC--DVCHKTFAVPARLVRHYRTHTGERPFECEY--CHKMFSVK 353
++ +++ RS C + C K ++ P+ L +H RTH+ ERPF C+Y C K F K
Sbjct: 8 SIEIESKNLRSAKKIFHCPYEECGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRK 67
Query: 354 ENLQVHRRIHTKERPYRCNV--CDAAF 428
+L++H+R HT +P+ C+ CDA F
Sbjct: 68 SHLKIHKRCHTNVKPFSCHYDGCDAQF 94
Score = 62.9 bits (146), Expect = 2e-11
Identities = 36/97 (37%), Positives = 45/97 (46%), Gaps = 6/97 (6%)
Frame = +3
Query: 156 ECGLTLSTRSALTAHARSHRSTADAHRCDV--CHKTFAVPARLVRHYRTHTGERPFECEY 329
ECG S S L H R+H S CD C K F + L H R HT +PF C Y
Sbjct: 29 ECGKKYSRPSLLEQHLRTH-SNERPFVCDYTGCSKAFYRKSHLKIHKRCHTNVKPFSCHY 87
Query: 330 --CHKMFSVKENLQVHRRIHTKERPYRC--NVCDAAF 428
C F +++L+ H +H K +PY C CD F
Sbjct: 88 DGCDAQFYTQQHLERHIEVHRKPKPYACTWEGCDECF 124
Score = 50.4 bits (115), Expect = 1e-07
Identities = 34/122 (27%), Positives = 51/122 (41%), Gaps = 6/122 (4%)
Frame = +3
Query: 93 FASKSSLYNMIGDEERVHQCGECGLTLSTRSALTAHARSHRSTAD---AHRCDV--CHKT 257
F S L N I E V C CG T + L H H++T + + C + C K+
Sbjct: 188 FEKWSQLQNHIR-EAHVPSCSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKS 246
Query: 258 FAVPARLVRHYRT-HTGERPFECEYCHKMFSVKENLQVHRRIHTKERPYRCNVCDAAFEH 434
F + L +H H G F C+ C F K LQ H T ++ ++ + + +H
Sbjct: 247 FTRSSALKKHISVIHEGNMAFHCDSCGTKFGYKHMLQRHLERGTCKKAHKPYINECGIKH 306
Query: 435 SG 440
G
Sbjct: 307 DG 308
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 59.3 bits (137), Expect = 3e-10
Identities = 29/75 (38%), Positives = 46/75 (61%), Gaps = 5/75 (6%)
Frame = +3
Query: 174 STRSALTAHARSHRSTADA---HRCDVCHKTFAVPARLVRHYRTHTGERPFECEY--CHK 338
++R +H S +++ A +RC C + F+ P+ L H +HTGERPF C+Y C K
Sbjct: 446 TSRKIAQSHTGSSSTSSAANVRYRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGK 505
Query: 339 MFSVKENLQVHRRIH 383
F+V+ N++ H+RIH
Sbjct: 506 AFNVRSNMRRHQRIH 520
Score = 33.1 bits (72), Expect = 0.019
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +3
Query: 315 FECEYCHKMFSVKENLQVHRRIHTKERPYRCNV--CDAAF 428
+ C C + FS +L++H HT ERP+ C+ C AF
Sbjct: 468 YRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAF 507
Score = 30.7 bits (66), Expect = 0.10
Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = +3
Query: 144 HQCGECGLTLSTRSALTAHARSHRSTADAHRCDV--CHKTFAVPARLVRHYRTH 299
++C EC S S+L H SH CD C K F V + + RH R H
Sbjct: 468 YRCTECLQGFSRPSSLKIHTYSHTGER-PFVCDYAGCGKAFNVRSNMRRHQRIH 520
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 55.2 bits (127), Expect = 4e-09
Identities = 30/92 (32%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
Frame = +3
Query: 168 TLSTRSALTAHARSHRSTADAHRCDVCHKTFAVPARLVRHYRTHTGERPFECEY--CHKM 341
T +T + + + + ++C +C K F RH RTHTGE+P C + C K
Sbjct: 5 TTATTTGKPSRSTKNPDAPRPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKR 64
Query: 342 FSVKENLQVHRRIHTKERPYRCNVCDAAFEHS 437
FS + L H RIHT R AA +S
Sbjct: 65 FSRSDELTRHARIHTNANSRRNAAAAAAANNS 96
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 53.6 bits (123), Expect = 1e-08
Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Frame = +3
Query: 228 AHRCDVCHKTFAVPARLVRHYRTHTGERPFECEY--CHKMFSVKENLQVHRRIHTKE 392
++ C C + F VRH R+HTGE+PFEC Y C K F+ ++ L H R H ++
Sbjct: 3 SYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTHLRK 59
Score = 35.9 bits (79), Expect = 0.003
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +3
Query: 309 RPFECEYCHKMFSVKENLQVHRRIHTKERPYRCN 410
+ +EC +C ++F +E+ H R HT E+P+ C+
Sbjct: 2 KSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECS 35
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 53.6 bits (123), Expect = 1e-08
Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Frame = +3
Query: 177 TRSALTAHARSHRSTADAHRCDV--CHKTFAVPARLVRHYRTHTGERPFECEYCHKMFSV 350
+ ++ ++ A+S + + C C+K F L H THT RPF+C C K F+
Sbjct: 552 SENSSSSKAKSESKSQGNYVCTFAGCNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFAR 611
Query: 351 KENLQVHRRIHTKERPYRCNVCDAAF 428
+ + + H ++HT + + C C+ F
Sbjct: 612 QHDKRRHEQLHTGIKAFACVTCNQRF 637
Score = 39.9 bits (89), Expect = 2e-04
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Frame = +3
Query: 204 RSHRSTADAHR---CDVCHKTFAVPARLVRHYRTHTGERPFECEYCHKMFSVKENLQVH 371
+SH +T +R C +C K+FA RH + HTG + F C C++ F+ + L H
Sbjct: 588 KSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQRFARMDALNRH 646
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 49.6 bits (113), Expect = 2e-07
Identities = 24/55 (43%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +3
Query: 237 CDVCHKTFAVPARLVRHYRT-HTGERPFECEYCHKMFSVKENLQVHRRIHTKERP 398
C C K F L RH R+ HT E+PF C C K FS ++NL+ H R+H P
Sbjct: 425 CPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQHERLHVNASP 478
Score = 36.7 bits (81), Expect = 0.002
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +3
Query: 303 GERPFECEYCHKMFSVKENLQVH-RRIHTKERPYRCNVCDAAF 428
G + F C C K F E+L+ H R +HT E+P+ C +C F
Sbjct: 419 GGKSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRF 460
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 48.0 bits (109), Expect = 6e-07
Identities = 20/54 (37%), Positives = 28/54 (51%)
Frame = +3
Query: 246 CHKTFAVPARLVRHYRTHTGERPFECEYCHKMFSVKENLQVHRRIHTKERPYRC 407
C+K A + H +TH +RP+ C+ C F +L+ H RIH RPY C
Sbjct: 450 CNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVC 503
Score = 44.4 bits (100), Expect = 8e-06
Identities = 23/73 (31%), Positives = 37/73 (50%)
Frame = +3
Query: 159 CGLTLSTRSALTAHARSHRSTADAHRCDVCHKTFAVPARLVRHYRTHTGERPFECEYCHK 338
C ++ + + +H ++H S +RCD+C F L RH R H RP+ CE C K
Sbjct: 450 CNKRIARKYNVESHIQTHLSDRP-YRCDLCKAGFVRHHDLKRHLRIHENGRPYVCE-CLK 507
Query: 339 MFSVKENLQVHRR 377
F+ + L H++
Sbjct: 508 RFNRLDALNRHKQ 520
Score = 41.5 bits (93), Expect = 6e-05
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Frame = +3
Query: 231 HRCDVCHKTFAV----PARLVRHYRTHTGERPFECEY--CHKMFSVKENLQVHRRIHTKE 392
HRC ++ + P + Y + + C Y C+K + K N++ H + H +
Sbjct: 411 HRCKTRKQSTRICRIPPETMASLYCGPEADGKYVCLYNGCNKRIARKYNVESHIQTHLSD 470
Query: 393 RPYRCNVCDAAF 428
RPYRC++C A F
Sbjct: 471 RPYRCDLCKAGF 482
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 42.7 bits (96), Expect = 2e-05
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 8/64 (12%)
Frame = +3
Query: 237 CDVCHKTFAVPARLVRHYRTHTGERPFECEY-------CHKMFSVKENLQVH-RRIHTKE 392
C+ C + FA L RH R+HT E+PF C C + FS ++ L H ++IH
Sbjct: 72 CETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRHQQKIHRNP 131
Query: 393 RPYR 404
+P R
Sbjct: 132 QPRR 135
Score = 37.1 bits (82), Expect = 0.001
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +3
Query: 309 RPFECEYCHKMFSVKENLQVHRRIHTKERPYRCNVCD 419
+ + CE C + F+ E+L+ H R HT E+P+ C+ D
Sbjct: 68 KQYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEID 104
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 41.9 bits (94), Expect = 4e-05
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = +3
Query: 177 TRSALTAHARSHRSTADAHRCDV--CHKTFAVPARLVRHYRTHTGERPFECEYCHKMFSV 350
T L +R+HR C C K+F L RH RTH + F C +C++ F+
Sbjct: 8 TEKPLKKRSRAHRLGDPRFYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFAR 67
Query: 351 KENLQVH-RRIHTKER 395
+ L H +++H +++
Sbjct: 68 SDVLNRHVQQMHLQKQ 83
Score = 41.1 bits (92), Expect = 7e-05
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Frame = +3
Query: 276 LVRHYRTHT-GERPFECEY--CHKMFSVKENLQVHRRIHTKERPYRCNVCDAAFEHS 437
L + R H G+ F C Y C K F+ KE+L+ H R H + + C+ C+ AF S
Sbjct: 12 LKKRSRAHRLGDPRFYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARS 68
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 39.1 bits (87), Expect = 3e-04
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = +3
Query: 201 ARSHRSTADAHRCDV--CHKTFAVPARLVRHYRTHTGERPFECEYCHKMFSVKENLQVH- 371
+R+++ ++CD C K+F RH+R+HT + F C +C F+ + L H
Sbjct: 7 SRAYQEGDIRYKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHV 66
Query: 372 RRIHTKE 392
+ H K+
Sbjct: 67 NQKHVKQ 73
Score = 35.1 bits (77), Expect = 0.005
Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +3
Query: 303 GERPFECEY--CHKMFSVKENLQVHRRIHTKERPYRCNVCDAAFEHS 437
G+ ++C++ C K F+ KE+ + H R HT + + C C ++F S
Sbjct: 13 GDIRYKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRS 59
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 38.7 bits (86), Expect = 4e-04
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +3
Query: 306 ERPFECEYCHKMFSVKENLQVHRRIHTKERPYRCNVCD 419
+R F C+ C K F+ ENL H+ H+K P C C+
Sbjct: 28 KRVFPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCE 65
Score = 36.7 bits (81), Expect = 0.002
Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = +3
Query: 237 CDVCHKTFAVPARLVRHYRTHTGERPFECEYCHKMFSVKENLQVH-RRIH 383
CD C K F L RH H+ P C YC K+ L+ H +R H
Sbjct: 33 CDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHIQRFH 82
>SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 35.1 bits (77), Expect = 0.005
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +3
Query: 276 LVRHYRTHTGERPFECEY--CHKMFSVKENLQVHRR 377
LV H R+HTGE+PF C C + F+ + L H R
Sbjct: 93 LVAHLRSHTGEKPFICSVPECDRSFTRSDALAKHMR 128
Score = 30.3 bits (65), Expect = 0.14
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +3
Query: 150 CGECGLTLSTRSALTAHARSHRSTADAHRCDV--CHKTFAVPARLVRHYRT 296
C G+ ++R AL AH RSH + C V C ++F L +H RT
Sbjct: 80 CPRKGMVQTSRFALVAHLRSH-TGEKPFICSVPECDRSFTRSDALAKHMRT 129
Score = 29.9 bits (64), Expect = 0.18
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 9/56 (16%)
Frame = +3
Query: 297 HTGER--PFECEY--CHKMFSVKEN---LQVHRRIHTKERPYRCNV--CDAAFEHS 437
H G R + CE+ C + V+ + L H R HT E+P+ C+V CD +F S
Sbjct: 65 HIGNRRPKYTCEWDDCPRKGMVQTSRFALVAHLRSHTGEKPFICSVPECDRSFTRS 120
>SPBP19A11.06 |lid2|SPBP4H10.01|Lid2 complex subunit Lid2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1513
Score = 28.3 bits (60), Expect = 0.55
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +3
Query: 318 ECEYCHKMFSVKENLQVHRRIHTKERPYRCNVCDAAFE 431
ECE CH+ + K L++ ++ ++ + C +CD E
Sbjct: 1111 ECEICHEWYHAK-CLKMSKKKLRQDEKFTCPICDYRVE 1147
>SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1588
Score = 27.5 bits (58), Expect = 0.97
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = +3
Query: 318 ECEYCHKMFSVKENLQVHRRIHTKERPYRCNVCDAAFE 431
ECE CH+ + K +++ E+ + C +CD E
Sbjct: 1186 ECELCHEWYHAKCMKMSKKKLRADEK-FICPICDYRVE 1222
>SPAC630.06c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 188
Score = 26.6 bits (56), Expect = 1.7
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 321 CEYCHKMFSVKENLQVHRRIHTKERPYR 404
C+ HK+ S+K+ HRR +K+R R
Sbjct: 125 CQKLHKVVSIKKEESKHRRRPSKKRRIR 152
>SPAC11G7.02 |pub1||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 767
Score = 26.2 bits (55), Expect = 2.2
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = -2
Query: 328 YSHSNGRSPVWVR*WRTSRAGTAKVLWHTSQRCASAVERWDRACAVSALRVD 173
Y N RS W+R +S AG A H+S A+ E + + +A R +
Sbjct: 223 YVDHNTRSTTWIRPNLSSVAGAAAAELHSSASSANVTEGVQPSSSNAARRTE 274
>SPAC31G5.04 |||homoisocitrate dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 362
Score = 25.4 bits (53), Expect = 3.9
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = -1
Query: 350 HTKHFMAIFTFKWSLASMGSVVAHESCRHSKSLMAHVAAMCISSRTMGSCV 198
H K + I K ++ S+ + ESCRH++SL A++ + + + S V
Sbjct: 186 HKKPLVTII-HKSNVMSVTDGLFRESCRHAQSLDPSYASINVDEQIVDSMV 235
>SPBC17D1.07c |||GTPase regulator |Schizosaccharomyces pombe|chr
2|||Manual
Length = 962
Score = 25.4 bits (53), Expect = 3.9
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -1
Query: 374 TVYLQIFFHTKHFMAIFT 321
TVYL FFH F+ +FT
Sbjct: 124 TVYLNAFFHFLDFIGMFT 141
>SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 478
Score = 25.4 bits (53), Expect = 3.9
Identities = 17/60 (28%), Positives = 24/60 (40%)
Frame = +3
Query: 120 MIGDEERVHQCGECGLTLSTRSALTAHARSHRSTADAHRCDVCHKTFAVPARLVRHYRTH 299
M G E + + TL+ S A + + A RCD C F + L H RT+
Sbjct: 103 MSGSELKGEESHNSPGTLNGTSVANASKQPNMPNA-TFRCDKCDMMFVKQSGLTNHKRTY 161
>SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 732
Score = 25.0 bits (52), Expect = 5.2
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 318 ECEYCHKMFSVKENLQVHRRIHTKERPYRCNVCD 419
+CE+C+ F + L H R E+ RC +CD
Sbjct: 246 KCEFCNTHFYDDDELFKHCR----EKHERCYICD 275
>SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 442
Score = 25.0 bits (52), Expect = 5.2
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +3
Query: 309 RPFECEYCHKMFSVKENLQVHR 374
+P+ CE C K + L+ HR
Sbjct: 397 KPYRCEVCSKRYKNLNGLKYHR 418
Score = 24.6 bits (51), Expect = 6.8
Identities = 7/22 (31%), Positives = 13/22 (59%)
Frame = +3
Query: 369 HRRIHTKERPYRCNVCDAAFEH 434
H+ + +PYRC VC +++
Sbjct: 389 HQGFVVENKPYRCEVCSKRYKN 410
>SPBC29A10.07 |||nucleoporin Pom152|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1250
Score = 24.6 bits (51), Expect = 6.8
Identities = 16/59 (27%), Positives = 26/59 (44%)
Frame = +3
Query: 159 CGLTLSTRSALTAHARSHRSTADAHRCDVCHKTFAVPARLVRHYRTHTGERPFECEYCH 335
C +L+T + R R TA + D + +V L++ GE+P+ EY H
Sbjct: 724 CKRSLNTADTVIK-VRRQRPTATFYSSDNTYTLKSVEGALMKIPLRLAGEKPWYVEYSH 781
>SPBC646.07c |||enoyl reductase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 295
Score = 24.6 bits (51), Expect = 6.8
Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = -1
Query: 389 LCVNTT---VYLQIFFHTKHFMAIFTFKWSLASMGSVVAHESCRH 264
LC+N V + + F + + +IF ++SLA+M ++C H
Sbjct: 115 LCLNQKIAFVLVMLHFMKREYESIFVHRFSLATMPLRNIFKNCAH 159
>SPAC2F7.16c |||phospholipase D |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1369
Score = 24.6 bits (51), Expect = 6.8
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +1
Query: 1 HEGLSVECMCFLITDRCI*ITTYANIRNVNASHPNHHCI 117
HEG+ V M + D I I ++ ++ + HPN + I
Sbjct: 592 HEGVMVYIMIYRNIDATIPIDSFHTKEHLQSLHPNIYVI 630
>SPBC17D11.01 |nep1||nedd8 protease Nep1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 420
Score = 24.6 bits (51), Expect = 6.8
Identities = 11/33 (33%), Positives = 14/33 (42%)
Frame = +3
Query: 135 ERVHQCGECGLTLSTRSALTAHARSHRSTADAH 233
E H+ L S+ S T H +H S D H
Sbjct: 263 ETSHESSNSNLKKSSESGSTNHHNNHESDKDLH 295
>SPBC1198.01 |||glutathione-dependent formaldehyde dehydrogenase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 423
Score = 24.2 bits (50), Expect = 9.0
Identities = 18/64 (28%), Positives = 25/64 (39%), Gaps = 7/64 (10%)
Frame = -1
Query: 329 IFTFKWSLASMGSVVAHESCRHSKSLMAHVAAMCISSRTM-------GSCVCCKRTAGGQ 171
IF+ + G+++ HESC V + I R + G C CKR
Sbjct: 81 IFSGEMPGIEKGAILGHESCGIVAEKGDEVNNLEIGDRVVIAFDLACGQCSFCKRHEYAA 140
Query: 170 CQTT 159
C TT
Sbjct: 141 CDTT 144
>SPCC4B3.03c |||DUF21 domain protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 679
Score = 24.2 bits (50), Expect = 9.0
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +3
Query: 171 LSTRSALTAHARSHRSTADAHRCDVCHKTFAVPARLVRHYR 293
LST +AL RSH A+ H + K A+ RLV + R
Sbjct: 417 LSTMAALHKSQRSHDLAANEHAPILNPKNSALNPRLVTNDR 457
>SPCC285.10c |||SPRY domain protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 382
Score = 24.2 bits (50), Expect = 9.0
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 196 HTHDPIVLLLMHIAATCAIRLLLCL 270
+TH + +L + IA I LL+CL
Sbjct: 16 NTHPNLAILFIFIALAAVIVLLICL 40
>SPAC25B8.17 |||peptidase family A22|Schizosaccharomyces pombe|chr
1|||Manual
Length = 295
Score = 24.2 bits (50), Expect = 9.0
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -1
Query: 356 FFHTKHFMAIFTFKWSLAS 300
+F TKH+MA W+LA+
Sbjct: 106 YFKTKHWMASNILAWALAA 124
>SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1336
Score = 24.2 bits (50), Expect = 9.0
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2
Query: 367 TCKFSFTLNILWQY 326
+C FSF + LWQY
Sbjct: 163 SCVFSFGVRFLWQY 176
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,935,657
Number of Sequences: 5004
Number of extensions: 38677
Number of successful extensions: 154
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 140
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 160149590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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