Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0155
         (705 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      24   1.4  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   2.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.6  
AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical pro...    22   5.6  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   7.4  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   9.8  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   9.8  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   9.8  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   9.8  

>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +1

Query: 493 HITIGTQTSNILRLFSTELLLVDDETMQYYTGLE 594
           HIT+ +     L +  + LL++DD TM+Y   L+
Sbjct: 167 HITLAS--GRTLTVTPSHLLVLDDRTMKYAQKLQ 198


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 10/37 (27%), Positives = 21/37 (56%)
 Frame = -1

Query: 477 FIYTRVIIFY*NFLRHLNQNAYCCVLQGVLYLHSVGK 367
           F+    I F+ NF+ H N   + C+ + ++ L+++ K
Sbjct: 140 FVILLWISFFLNFMLHCNNTTWRCLYRWIV-LYTLSK 175


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +3

Query: 129 REKSTPTKSSRLCRKHFVKSDYENISKY 212
           + ++ PTK    CR   + SD +N + Y
Sbjct: 548 QSQNPPTKPYGTCRSEGIFSDPKNCAAY 575


>AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical
           protein protein.
          Length = 148

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +1

Query: 160 GYVVNTL*NLTMKTLVNTQVSNININI*RKVL 255
           G+V+    NLT  T++ T  SN + +   K +
Sbjct: 24  GFVMEDANNLTQSTILTTCESNTDFSFGSKTI 55


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -2

Query: 236 FMLMFDTCVFTNV 198
           FM+   TC++TN+
Sbjct: 178 FMIFTSTCIYTNL 190


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = -1

Query: 429  LNQNAYCCVLQGVLYLHSV 373
            L+   + C++ G++YL S+
Sbjct: 1021 LHPQEFWCIVPGIIYLLSI 1039


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = -1

Query: 429  LNQNAYCCVLQGVLYLHSV 373
            L+   + C++ G++YL S+
Sbjct: 1021 LHPQEFWCIVPGIIYLLSI 1039


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = -1

Query: 429  LNQNAYCCVLQGVLYLHSV 373
            L+   + C++ G++YL S+
Sbjct: 1021 LHPQEFWCIVPGIIYLLSI 1039


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = -1

Query: 429  LNQNAYCCVLQGVLYLHSV 373
            L+   + C++ G++YL S+
Sbjct: 1021 LHPQEFWCIVPGIIYLLSI 1039


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,618
Number of Sequences: 336
Number of extensions: 3673
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)