Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0155
         (705 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    25   0.70 
DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex det...    22   6.5  
DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex det...    22   6.5  
DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex det...    22   6.5  
DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex det...    22   6.5  
DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    22   6.5  
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    22   6.5  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   6.5  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   6.5  

>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 25.0 bits (52), Expect = 0.70
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = +1

Query: 544 ELLLVDDETMQYYTGLETASKFSLVLITFLPM 639
           E++  + ET+Q  TGL+   + S +L+   P+
Sbjct: 340 EVVAKNKETLQAITGLKVKRRISFILVHGFPL 371


>DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +3

Query: 468 YR*NNYKASYYYWNSNIQYIK 530
           Y  NNYK   YY   NI YI+
Sbjct: 102 YNNNNYKKLQYY---NINYIE 119


>DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +3

Query: 468 YR*NNYKASYYYWNSNIQYIK 530
           Y  NNYK   YY   NI YI+
Sbjct: 102 YNNNNYKKLQYY---NINYIE 119


>DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +3

Query: 468 YR*NNYKASYYYWNSNIQYIK 530
           Y  NNYK   YY   NI YI+
Sbjct: 102 YNNNNYKKLQYY---NINYIE 119


>DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +3

Query: 468 YR*NNYKASYYYWNSNIQYIK 530
           Y  NNYK   YY   NI YI+
Sbjct: 102 YNNNNYKKLQYY---NINYIE 119


>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = +3

Query: 468 YR*NNYKASYYYWNSNIQYIKIVLYRAITC 557
           Y  NNY    YY   NI+ I + +   + C
Sbjct: 103 YNNNNYNKKLYYNIINIEQIPVPVPVPVYC 132


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = +3

Query: 468 YR*NNYKASYYYWNSNIQYIKIVLYRAITC 557
           Y  NNY    YY   NI+ I + +   + C
Sbjct: 103 YNNNNYNKKLYYNIINIEQIPVPVPVPVYC 132


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -1

Query: 405 VLQGVLYLHSVG 370
           VL+G+ YLHS G
Sbjct: 706 VLEGIRYLHSQG 717


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -1

Query: 405 VLQGVLYLHSVG 370
           VL+G+ YLHS G
Sbjct: 744 VLEGIRYLHSQG 755


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,653
Number of Sequences: 438
Number of extensions: 4173
Number of successful extensions: 17
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21683070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)