Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0154
         (714 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113636-1|AAM29641.1|  336|Drosophila melanogaster RH73327p pro...   266   2e-76
AY070974-1|AAL48596.1|  336|Drosophila melanogaster RE07422p pro...   266   2e-76
AE013599-448|AAF59231.1|  336|Drosophila melanogaster CG1598-PA ...   266   2e-76
BT001458-1|AAN71213.1|  119|Drosophila melanogaster GM18141p pro...    62   4e-15

>AY113636-1|AAM29641.1|  336|Drosophila melanogaster RH73327p
           protein.
          Length = 336

 Score =  266 bits (653), Expect(2) = 2e-76
 Identities = 125/150 (83%), Positives = 138/150 (92%)
 Frame = +3

Query: 264 AVQLSKVRESVLIISTDPAHNISDAFDQKFSKVPTKVKGFDNLFAMEIDPNVGLTELPEE 443
           AVQLSKVRESVLIISTDPAHNISDAFDQKF+KVPTKV GFDNLFAMEIDPN GL ELPEE
Sbjct: 42  AVQLSKVRESVLIISTDPAHNISDAFDQKFTKVPTKVNGFDNLFAMEIDPNAGLNELPEE 101

Query: 444 YFEGESEAMRLDKGVMQEIVGAFPGIDEAMSYAEVMKLVKGMNFSAVVFDTAPTGHTLRL 623
           YF+GE+EA+R+ KGVMQE++ A PGIDEAMSYAEVMKLVKGMNFS VVFDTAPTGHTLRL
Sbjct: 102 YFDGENEALRVSKGVMQEMINALPGIDEAMSYAEVMKLVKGMNFSVVVFDTAPTGHTLRL 161

Query: 624 LSFPQVVERGLGKLMRLKSKVXPFINQIAS 713
           ++FPQVVE+GLGKL+RLK KV P ++Q  S
Sbjct: 162 IAFPQVVEKGLGKLLRLKMKVAPLLSQFVS 191



 Score = 38.3 bits (85), Expect(2) = 2e-76
 Identities = 14/22 (63%), Positives = 20/22 (90%)
 Frame = +3

Query: 78  DFEPLEPSLKNVIDQKSLRWIF 143
           + EPLEPSL+N+++Q SL+WIF
Sbjct: 4   NLEPLEPSLQNLVEQDSLKWIF 25


>AY070974-1|AAL48596.1|  336|Drosophila melanogaster RE07422p
           protein.
          Length = 336

 Score =  266 bits (653), Expect(2) = 2e-76
 Identities = 125/150 (83%), Positives = 138/150 (92%)
 Frame = +3

Query: 264 AVQLSKVRESVLIISTDPAHNISDAFDQKFSKVPTKVKGFDNLFAMEIDPNVGLTELPEE 443
           AVQLSKVRESVLIISTDPAHNISDAFDQKF+KVPTKV GFDNLFAMEIDPN GL ELPEE
Sbjct: 42  AVQLSKVRESVLIISTDPAHNISDAFDQKFTKVPTKVNGFDNLFAMEIDPNAGLNELPEE 101

Query: 444 YFEGESEAMRLDKGVMQEIVGAFPGIDEAMSYAEVMKLVKGMNFSAVVFDTAPTGHTLRL 623
           YF+GE+EA+R+ KGVMQE++ A PGIDEAMSYAEVMKLVKGMNFS VVFDTAPTGHTLRL
Sbjct: 102 YFDGENEALRVSKGVMQEMINALPGIDEAMSYAEVMKLVKGMNFSVVVFDTAPTGHTLRL 161

Query: 624 LSFPQVVERGLGKLMRLKSKVXPFINQIAS 713
           ++FPQVVE+GLGKL+RLK KV P ++Q  S
Sbjct: 162 IAFPQVVEKGLGKLLRLKMKVAPLLSQFVS 191



 Score = 38.3 bits (85), Expect(2) = 2e-76
 Identities = 14/22 (63%), Positives = 20/22 (90%)
 Frame = +3

Query: 78  DFEPLEPSLKNVIDQKSLRWIF 143
           + EPLEPSL+N+++Q SL+WIF
Sbjct: 4   NLEPLEPSLQNLVEQDSLKWIF 25


>AE013599-448|AAF59231.1|  336|Drosophila melanogaster CG1598-PA
           protein.
          Length = 336

 Score =  266 bits (653), Expect(2) = 2e-76
 Identities = 125/150 (83%), Positives = 138/150 (92%)
 Frame = +3

Query: 264 AVQLSKVRESVLIISTDPAHNISDAFDQKFSKVPTKVKGFDNLFAMEIDPNVGLTELPEE 443
           AVQLSKVRESVLIISTDPAHNISDAFDQKF+KVPTKV GFDNLFAMEIDPN GL ELPEE
Sbjct: 42  AVQLSKVRESVLIISTDPAHNISDAFDQKFTKVPTKVNGFDNLFAMEIDPNAGLNELPEE 101

Query: 444 YFEGESEAMRLDKGVMQEIVGAFPGIDEAMSYAEVMKLVKGMNFSAVVFDTAPTGHTLRL 623
           YF+GE+EA+R+ KGVMQE++ A PGIDEAMSYAEVMKLVKGMNFS VVFDTAPTGHTLRL
Sbjct: 102 YFDGENEALRVSKGVMQEMINALPGIDEAMSYAEVMKLVKGMNFSVVVFDTAPTGHTLRL 161

Query: 624 LSFPQVVERGLGKLMRLKSKVXPFINQIAS 713
           ++FPQVVE+GLGKL+RLK KV P ++Q  S
Sbjct: 162 IAFPQVVEKGLGKLLRLKMKVAPLLSQFVS 191



 Score = 38.3 bits (85), Expect(2) = 2e-76
 Identities = 14/22 (63%), Positives = 20/22 (90%)
 Frame = +3

Query: 78  DFEPLEPSLKNVIDQKSLRWIF 143
           + EPLEPSL+N+++Q SL+WIF
Sbjct: 4   NLEPLEPSLQNLVEQDSLKWIF 25


>BT001458-1|AAN71213.1|  119|Drosophila melanogaster GM18141p
           protein.
          Length = 119

 Score = 61.7 bits (143), Expect(2) = 4e-15
 Identities = 29/30 (96%), Positives = 30/30 (100%)
 Frame = +3

Query: 264 AVQLSKVRESVLIISTDPAHNISDAFDQKF 353
           AVQLSKVRESVLIISTDPAHNISDAFDQK+
Sbjct: 42  AVQLSKVRESVLIISTDPAHNISDAFDQKY 71



 Score = 38.3 bits (85), Expect(2) = 4e-15
 Identities = 14/22 (63%), Positives = 20/22 (90%)
 Frame = +3

Query: 78  DFEPLEPSLKNVIDQKSLRWIF 143
           + EPLEPSL+N+++Q SL+WIF
Sbjct: 4   NLEPLEPSLQNLVEQDSLKWIF 25


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,477,012
Number of Sequences: 53049
Number of extensions: 470948
Number of successful extensions: 1224
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1201
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1224
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3170136354
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)