Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0154
         (714 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g01910.2 68414.m00109 anion-transporting ATPase, putative sim...   162   2e-40
At1g01910.1 68414.m00108 anion-transporting ATPase, putative sim...   162   2e-40
At5g60730.1 68418.m07620 anion-transporting ATPase family protei...    85   3e-17
At3g10350.1 68416.m01241 anion-transporting ATPase family protei...    83   2e-16
At1g26090.1 68414.m03182 hypothetical protein                          34   0.081
At1g72110.1 68414.m08335 expressed protein                             31   0.57 
At4g38360.2 68417.m05424 expressed protein contains Pfam profile...    29   3.1  
At4g38360.1 68417.m05423 expressed protein contains Pfam profile...    29   3.1  
At3g50430.1 68416.m05516 expressed protein                             27   9.3  

>At1g01910.2 68414.m00109 anion-transporting ATPase, putative
           similar to SP|O43681 Arsenical pump-driving ATPase (EC
           3.6.3.16) (Arsenite-translocating ATPase) (Arsenical
           resistance ATPase) (Arsenite-transporting ATPase) (ARSA)
           (ASNA-I) {Homo sapiens}; contains Pfam profile PF02374:
           Anion-transporting ATPase
          Length = 353

 Score =  162 bits (394), Expect = 2e-40
 Identities = 80/149 (53%), Positives = 108/149 (72%)
 Frame = +3

Query: 264 AVQLSKVRESVLIISTDPAHNISDAFDQKFSKVPTKVKGFDNLFAMEIDPNVGLTELPEE 443
           A+ L+ VR SVLIISTDPAHN+SDAF Q+F+K PT V+GF NLFAME+DP V   ++   
Sbjct: 40  AICLASVRSSVLIISTDPAHNLSDAFQQRFTKSPTLVQGFSNLFAMEVDPTVETDDM--- 96

Query: 444 YFEGESEAMRLDKGVMQEIVGAFPGIDEAMSYAEVMKLVKGMNFSAVVFDTAPTGHTLRL 623
                ++ M    G+  ++  A PGIDEAMS+AE++KLV+ M+++ +VFDTAPTGHTLRL
Sbjct: 97  ---AGTDGM---DGLFSDLANAIPGIDEAMSFAEMLKLVQTMDYATIVFDTAPTGHTLRL 150

Query: 624 LSFPQVVERGLGKLMRLKSKVXPFINQIA 710
           L FP  +E+GL KLM LKS+    + Q++
Sbjct: 151 LQFPATLEKGLSKLMSLKSRFGGLMTQMS 179


>At1g01910.1 68414.m00108 anion-transporting ATPase, putative
           similar to SP|O43681 Arsenical pump-driving ATPase (EC
           3.6.3.16) (Arsenite-translocating ATPase) (Arsenical
           resistance ATPase) (Arsenite-transporting ATPase) (ARSA)
           (ASNA-I) {Homo sapiens}; contains Pfam profile PF02374:
           Anion-transporting ATPase
          Length = 353

 Score =  162 bits (394), Expect = 2e-40
 Identities = 80/149 (53%), Positives = 108/149 (72%)
 Frame = +3

Query: 264 AVQLSKVRESVLIISTDPAHNISDAFDQKFSKVPTKVKGFDNLFAMEIDPNVGLTELPEE 443
           A+ L+ VR SVLIISTDPAHN+SDAF Q+F+K PT V+GF NLFAME+DP V   ++   
Sbjct: 40  AICLASVRSSVLIISTDPAHNLSDAFQQRFTKSPTLVQGFSNLFAMEVDPTVETDDM--- 96

Query: 444 YFEGESEAMRLDKGVMQEIVGAFPGIDEAMSYAEVMKLVKGMNFSAVVFDTAPTGHTLRL 623
                ++ M    G+  ++  A PGIDEAMS+AE++KLV+ M+++ +VFDTAPTGHTLRL
Sbjct: 97  ---AGTDGM---DGLFSDLANAIPGIDEAMSFAEMLKLVQTMDYATIVFDTAPTGHTLRL 150

Query: 624 LSFPQVVERGLGKLMRLKSKVXPFINQIA 710
           L FP  +E+GL KLM LKS+    + Q++
Sbjct: 151 LQFPATLEKGLSKLMSLKSRFGGLMTQMS 179


>At5g60730.1 68418.m07620 anion-transporting ATPase family protein
           low similarity to SP|O43681 Arsenical pump-driving
           ATPase (EC 3.6.3.16) (Arsenite-translocating ATPase)
           (Arsenical resistance ATPase) (Arsenite-transporting
           ATPase) (ARSA) (ASNA-I) {Homo sapiens}; contains Pfam
           profile PF02374: Anion-transporting ATPase
          Length = 391

 Score = 85.4 bits (202), Expect = 3e-17
 Identities = 53/158 (33%), Positives = 89/158 (56%), Gaps = 17/158 (10%)
 Frame = +3

Query: 264 AVQLSKVRESVLIISTDPAHNISDAFDQKFSKVPTK-VKGFDN-LFAMEIDPNVGLTELP 437
           AV+ +      +++STDPAH++SD+F Q  S    K V+G D+ L A+EI P +   E+ 
Sbjct: 90  AVKFASHGHPTIVVSTDPAHSLSDSFSQDLSGGVLKPVQGVDSPLLALEITPEIMKDEIK 149

Query: 438 EEYFEGESEAMRLDKGV-----------MQEIVGAF-PGIDEAMSYAEVMKLVKG---MN 572
            +  +   + M    G+           +++++ A  PGIDE  + ++V++ ++      
Sbjct: 150 RQTGDKSVKNMMDSMGLGMFAGELGDLNLEDMLNAASPGIDEIAAISKVLQFMEAPEYSR 209

Query: 573 FSAVVFDTAPTGHTLRLLSFPQVVERGLGKLMRLKSKV 686
           F+ +VFDTAPTGHTLRLLS P   +  + K+ +LK K+
Sbjct: 210 FTRIVFDTAPTGHTLRLLSLPDFYDSSISKITKLKKKI 247


>At3g10350.1 68416.m01241 anion-transporting ATPase family protein
           similar to SP|O43681 Arsenical pump-driving ATPase (EC
           3.6.3.16) (Arsenite-translocating ATPase) (Arsenical
           resistance ATPase) (Arsenite-transporting ATPase) (ARSA)
           (ASNA-I) {Homo sapiens}; contains Pfam profile PF02374:
           Anion-transporting ATPase; contains non-consensus GA
           donor splice site at intron 5
          Length = 411

 Score = 82.6 bits (195), Expect = 2e-16
 Identities = 55/170 (32%), Positives = 99/170 (58%), Gaps = 20/170 (11%)
 Frame = +3

Query: 264 AVQLSKVRESVLIISTDPAHNISDAFDQKFS-KVPTKVKGFD-NLFAMEIDPNVGLTEL- 434
           AV+ +      L++STDPAH++SD+F Q  +  +   V+G +  LFA+EI+P     E  
Sbjct: 108 AVRFANNGHPTLVVSTDPAHSLSDSFAQDLTGGMLVPVEGPEAPLFALEINPEKAREEFR 167

Query: 435 ----------PEEYFEGESEAMRLDK-GVMQ--EIVGA-FPGIDEAMSYAEVMKLVKGMN 572
                      +++ +G    M +++ G ++  E++    PG+DEA++ ++V++ ++   
Sbjct: 168 SASQMNGGTGVKDFMDGMGLGMLVEQLGELKLGELLDTPPPGLDEAIAISKVIQFLESPE 227

Query: 573 ---FSAVVFDTAPTGHTLRLLSFPQVVERGLGKLMRLKSKVXPFINQIAS 713
              F+ +VFDTAPTGHTLRLLS P  ++  +GK+++L+ K+    + I S
Sbjct: 228 YNMFTRIVFDTAPTGHTLRLLSLPDFLDASIGKILKLRQKITSATSAIKS 277


>At1g26090.1 68414.m03182 hypothetical protein
          Length = 455

 Score = 34.3 bits (75), Expect = 0.081
 Identities = 32/133 (24%), Positives = 58/133 (43%), Gaps = 15/133 (11%)
 Frame = +3

Query: 273 LSKVRESVLIISTDPAHNISDAFDQKFSKVPTKVKGFDNLFAMEIDPNVGLTELPEEYFE 452
           L+ +   ++I + DP+         K    PT +   DNL  + ++    L E P +  +
Sbjct: 84  LAGLSTCLVIHNQDPSAEF--LLGSKIGTSPTLIN--DNLSVIRLETTKMLLE-PLKQLK 138

Query: 453 GESEAMRLDKGVMQEIVG----AFPGIDEAMSYAEVMKLV-----------KGMNFSAVV 587
                + + +GV++ +VG      PG+D   S  E+ +LV           KG  F  ++
Sbjct: 139 QADARLNMTQGVLEGVVGEELGVLPGMDSIFSMLELERLVGFFRQATRKNHKGKPFDVII 198

Query: 588 FDTAPTGHTLRLL 626
           +D   T  TLR++
Sbjct: 199 YDGISTEETLRMI 211


>At1g72110.1 68414.m08335 expressed protein
          Length = 479

 Score = 31.5 bits (68), Expect = 0.57
 Identities = 18/68 (26%), Positives = 35/68 (51%)
 Frame = +3

Query: 360 VPTKVKGFDNLFAMEIDPNVGLTELPEEYFEGESEAMRLDKGVMQEIVGAFPGIDEAMSY 539
           +PTK+   +++   +IDPN+   E P+E+ E  +  M L    M + +  F  +    S+
Sbjct: 77  IPTKINVEEHVIVPDIDPNI---ENPDEFLEDYTSNMALSPMDMSKPLWEFHLLKLKTSH 133

Query: 540 AEVMKLVK 563
           AE + + +
Sbjct: 134 AEAVTVAR 141


>At4g38360.2 68417.m05424 expressed protein contains Pfam profile
           PF03619: Domain of unknown function
          Length = 485

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 16/53 (30%), Positives = 28/53 (52%)
 Frame = +3

Query: 540 AEVMKLVKGMNFSAVVFDTAPTGHTLRLLSFPQVVERGLGKLMRLKSKVXPFI 698
           A +  L K + F ++VF T   G  + LLS   + +  + + ++LK+ V  FI
Sbjct: 228 AHIQPLAKFLTFKSIVFLTWWQGVAIALLSSLGLFKSSIAQSLQLKTSVQDFI 280


>At4g38360.1 68417.m05423 expressed protein contains Pfam profile
           PF03619: Domain of unknown function
          Length = 304

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 16/53 (30%), Positives = 28/53 (52%)
 Frame = +3

Query: 540 AEVMKLVKGMNFSAVVFDTAPTGHTLRLLSFPQVVERGLGKLMRLKSKVXPFI 698
           A +  L K + F ++VF T   G  + LLS   + +  + + ++LK+ V  FI
Sbjct: 228 AHIQPLAKFLTFKSIVFLTWWQGVAIALLSSLGLFKSSIAQSLQLKTSVQDFI 280


>At3g50430.1 68416.m05516 expressed protein 
          Length = 642

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
 Frame = +3

Query: 18  AYVNF**ILIYKSSIMEDTKDFEP----LEPSLKNVIDQKSLRWIFXXXXXXXXXXXCRY 185
           ++V F   ++ +  ++ED+ DFEP    L+ ++K + D   LRW              RY
Sbjct: 258 SFVQFLCSMVQQVHVVEDSDDFEPSYLILQKTIKLIPD--LLRWCQPKLKSQSGSCMSRY 315

Query: 186 LNHVIV 203
           L H ++
Sbjct: 316 LGHKLL 321


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,077,109
Number of Sequences: 28952
Number of extensions: 237209
Number of successful extensions: 594
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 573
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 590
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1545769616
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)