Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0153
(315 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_02_0112 + 5385660-5385821,5386337-5386876 27 2.3
08_01_0123 + 974941-975186,975274-977505 27 2.3
12_01_0013 - 99290-99299,99593-99703,100085-100587,100925-100995... 27 3.1
11_01_0013 - 103484-103493,103787-103897,104279-104781,105119-10... 27 3.1
08_02_0902 - 22408895-22409620,22410190-22410326,22410550-224106... 27 3.1
01_01_1152 + 9170628-9171899 27 3.1
11_01_0676 - 5511755-5511831,5512857-5513052,5513462-5513577,551... 27 4.1
06_03_0191 - 17720512-17721435,17721718-17721843,17721940-177221... 27 4.1
01_01_0492 - 3632812-3633189,3633563-3633709,3633906-3633995,363... 27 4.1
05_01_0192 + 1394342-1396645 26 5.4
03_05_1133 - 30614901-30615389,30615823-30615933,30616113-306161... 26 5.4
03_04_0196 - 18365840-18366701,18366875-18366950,18366989-183672... 26 5.4
11_06_0092 + 19973364-19975983,19976272-19976648 26 7.1
11_01_0353 - 2648496-2649224 26 7.1
08_01_1063 + 10839860-10840099,10840185-10840895 26 7.1
04_04_0276 + 24091360-24091464,24091580-24091713,24091813-240924... 26 7.1
04_03_0182 - 12349072-12349149,12349459-12349656,12349746-123497... 26 7.1
03_06_0043 - 31251772-31251965,31252071-31252158 26 7.1
03_05_0730 + 27208293-27208813,27209052-27209173,27210429-272104... 26 7.1
01_06_0373 - 28841462-28842850 26 7.1
12_01_0550 - 4411926-4412207,4414661-4414774 25 9.4
06_03_0611 - 22721977-22722276,22722765-22722853,22722978-227230... 25 9.4
02_02_0421 - 10042184-10042197,10042442-10042822,10044158-100442... 25 9.4
01_06_1406 - 37073548-37073822,37073892-37074111,37074200-370742... 25 9.4
>10_02_0112 + 5385660-5385821,5386337-5386876
Length = 233
Score = 27.5 bits (58), Expect = 2.3
Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Frame = +3
Query: 72 ICLFTIAIAAMAAVTNLSNVLKNGNDNF--TARMFTEVVKNNPGKSVVLSAFSVLPPLAQ 245
+CL T+ + + ++ +S++LK G +NF ++ + VV+ P K + +F L +
Sbjct: 43 MCLSTLRYLSSSLLSRVSHLLKVGRNNFRPPPKVDSSVVRIEPRKPLPPVSFKEWDGLVR 102
Query: 246 LALASDGETHEELLK 290
L +T + K
Sbjct: 103 LCFNRKNKTLGAIFK 117
>08_01_0123 + 974941-975186,975274-977505
Length = 825
Score = 27.5 bits (58), Expect = 2.3
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +3
Query: 171 TEVVKNNPGKSVVLSAFSVLPPLAQLALASDGETHEELLKAIGFPDD 311
T ++ +P +L L +A A A+DG H L +G PDD
Sbjct: 617 TNILNYSPCSVAILVDRGSLSTVAAAAAAADGFPHRVALYFLGGPDD 663
>12_01_0013 -
99290-99299,99593-99703,100085-100587,100925-100995,
101413-101491,102336-102956
Length = 464
Score = 27.1 bits (57), Expect = 3.1
Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = -2
Query: 170 KHSGCEVIVSIFEHIREICDGCHCRDG--DSKQTNDC 66
K GC+ + + + GCHC DG + + +DC
Sbjct: 386 KLEGCDQAIGSDAVVEALRGGCHCLDGFRNGNEISDC 422
>11_01_0013 -
103484-103493,103787-103897,104279-104781,105119-105189,
105607-105685,106530-107153
Length = 465
Score = 27.1 bits (57), Expect = 3.1
Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = -2
Query: 170 KHSGCEVIVSIFEHIREICDGCHCRDG--DSKQTNDC 66
K GC+ + + + GCHC DG + + +DC
Sbjct: 387 KLEGCDQAIGSDAVVEALRGGCHCLDGFRNGNEISDC 423
>08_02_0902 -
22408895-22409620,22410190-22410326,22410550-22410685,
22410787-22411224
Length = 478
Score = 27.1 bits (57), Expect = 3.1
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 5/47 (10%)
Frame = +2
Query: 23 IRHEDS-RDAGHKHEDNHLFVYYRHRGNGS--RH--KSL*CAQKWKR 148
+RH++ + G+ +ED H + Y + NGS +H KSL A W R
Sbjct: 155 LRHKNLVKLIGYCYEDEHRMLVYEYMSNGSLEKHLFKSLDGAMPWMR 201
>01_01_1152 + 9170628-9171899
Length = 423
Score = 27.1 bits (57), Expect = 3.1
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 195 GKSVVLSAFSVLPPLAQLALASDGETHEELLKAIGFP 305
G++ ++S S LA +A + GET ELL +G P
Sbjct: 58 GRNFIVSPLSFHAALALVADGARGETQRELLGFLGSP 94
>11_01_0676 - 5511755-5511831,5512857-5513052,5513462-5513577,
5513752-5514597,5515515-5515766,5522344-5525206
Length = 1449
Score = 26.6 bits (56), Expect = 4.1
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -2
Query: 122 EICDGCHCR 96
E CDGCHCR
Sbjct: 1322 EYCDGCHCR 1330
>06_03_0191 - 17720512-17721435,17721718-17721843,17721940-17722140,
17722189-17722332,17722415-17722722,17723433-17723568,
17723748-17723841,17723976-17724073,17724951-17725004,
17725704-17726150,17726227-17726393,17726540-17726663,
17726751-17726837,17727000-17727056,17727492-17727560,
17727664-17727811,17727893-17728116,17728842-17728958,
17729649-17729742,17730573-17730640,17733278-17733334,
17733412-17733511,17733638-17733674,17734077-17734200,
17735254-17735322,17735371-17735410,17735905-17735993,
17736849-17736953,17737033-17737104,17737814-17737936,
17738049-17738117,17738966-17739059,17739145-17739231,
17740184-17740351,17740436-17740552,17741484-17741590,
17741671-17741803,17742564-17742667,17743504-17743629,
17744148-17744216,17744996-17745064,17745278-17745358,
17745444-17745533,17745896-17746000,17747803-17747873,
17748320-17748461,17749266-17749330,17750081-17750168,
17750236-17750325,17750437-17750673,17751064-17751170,
17751625-17751832,17752376-17752546
Length = 2366
Score = 26.6 bits (56), Expect = 4.1
Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +3
Query: 12 GLQEFGTRIRETQATNMKTIICLFTIAIAAM-AAVTNLSNVLKNGNDNFTARM 167
G Q T I + K I+ I+ A AA L + + GND FTARM
Sbjct: 914 GAQSLSTDILSMVQSTFKGILLESEISTAQRRAACEGLGLLARIGNDAFTARM 966
>01_01_0492 -
3632812-3633189,3633563-3633709,3633906-3633995,
3634278-3634331,3636434-3636598,3637252-3637488,
3637610-3637696,3637846-3638022
Length = 444
Score = 26.6 bits (56), Expect = 4.1
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +2
Query: 8 PRAAGIRHEDSRDAGHKH 61
PRAAG+ DS GH+H
Sbjct: 151 PRAAGVVRRDSTSDGHEH 168
>05_01_0192 + 1394342-1396645
Length = 767
Score = 26.2 bits (55), Expect = 5.4
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +2
Query: 17 AGIRHEDS-RDAGHKHEDNHLFVYYRHRGNGSRHKSL 124
AG+RH + R G HE + + Y + NGS K+L
Sbjct: 467 AGLRHRNLLRLQGWCHEKGEILLVYDYMRNGSLDKAL 503
>03_05_1133 -
30614901-30615389,30615823-30615933,30616113-30616178,
30616347-30616406,30616493-30616801,30616960-30617108,
30617200-30617269,30617370-30617494,30617516-30617573,
30618176-30618370,30618585-30618857,30618950-30619120,
30619203-30619333,30619423-30619582,30619712-30619900,
30620023-30620118,30620381-30620611,30620715-30620853,
30620903-30621057,30621160-30621378
Length = 1131
Score = 26.2 bits (55), Expect = 5.4
Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 8/74 (10%)
Frame = -3
Query: 277 SWVSPSEAKAN*ARGGSTENAERTTLFPGLF-----FTTSVNILAVKLSFPFLSTLERFV 113
SW+S + A+ R G + E L+P + T +N L +++ + ++ F+
Sbjct: 644 SWISKASARQRRGRAGRVQPGECYHLYPRYYQLPELLRTPLNSLCLQIKSLQVGSIGEFL 703
Query: 112 TAAI---AAMAIVN 80
+AA+ A +A+ N
Sbjct: 704 SAALQPPAPLAVQN 717
>03_04_0196 -
18365840-18366701,18366875-18366950,18366989-18367237,
18367819-18367837
Length = 401
Score = 26.2 bits (55), Expect = 5.4
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Frame = -3
Query: 139 FLSTLERFVTAAIAAMAIVNKQ----MIVFMFVACVSRILVPNSCSPGIH 2
++ST+ +V A +K +VF F+ C + I +PN PG H
Sbjct: 207 YISTVRSYVDEAYLVQGHTHKHEPDNTLVFFFLGCTNMISLPN---PGYH 253
>11_06_0092 + 19973364-19975983,19976272-19976648
Length = 998
Score = 25.8 bits (54), Expect = 7.1
Identities = 17/64 (26%), Positives = 32/64 (50%)
Frame = +3
Query: 108 AVTNLSNVLKNGNDNFTARMFTEVVKNNPGKSVVLSAFSVLPPLAQLALASDGETHEELL 287
A NLS + + N ++ EV+ N ++ +AFS LP L ++ + + + H +
Sbjct: 206 AFNNLSGAIPDPIWNISSLTIFEVISNKLSGTLPTNAFSNLPSLQEVYMYYN-QFHGRIP 264
Query: 288 KAIG 299
+IG
Sbjct: 265 ASIG 268
>11_01_0353 - 2648496-2649224
Length = 242
Score = 25.8 bits (54), Expect = 7.1
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = -1
Query: 69 LSSCLWPASLESSCRIPAA 13
L+S +WP+S+ S+C+ AA
Sbjct: 45 LASFIWPSSMSSACKQAAA 63
>08_01_1063 + 10839860-10840099,10840185-10840895
Length = 316
Score = 25.8 bits (54), Expect = 7.1
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = -1
Query: 312 RRQGSR*LSKALHGFHHQKLKLTEREEAAPKMPRGQRFSLDYFSLLR 172
+R+G R +++ GFH L + E APK R +FSL ++R
Sbjct: 120 KRKGERSVNRKDEGFHVVTLVSPKGEPLAPKTARA-KFSLQCGIIVR 165
>04_04_0276 +
24091360-24091464,24091580-24091713,24091813-24092454,
24092858-24093044
Length = 355
Score = 25.8 bits (54), Expect = 7.1
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -2
Query: 113 DGCHCRDGDSKQTNDCLHVCGLRL 42
DGC C D D+ D GLRL
Sbjct: 216 DGCSCADADADADTDAPPCRGLRL 239
>04_03_0182 -
12349072-12349149,12349459-12349656,12349746-12349750,
12349928-12350041,12350129-12350240,12350363-12350377
Length = 173
Score = 25.8 bits (54), Expect = 7.1
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +1
Query: 97 RQWQPSQISLMCSKMETITSQPECLPK**KIIQGKAL 207
+Q P + +++CSK E ++PE P ++ GK +
Sbjct: 112 KQKSPEEAAILCSKWEAEITKPEWHPFMIVMVDGKEM 148
>03_06_0043 - 31251772-31251965,31252071-31252158
Length = 93
Score = 25.8 bits (54), Expect = 7.1
Identities = 10/26 (38%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = -2
Query: 122 EICDG-CHCRDGDSKQTNDCLHVCGL 48
+ CDG C R + + +DCL CG+
Sbjct: 30 DFCDGKCKVRCSKASRHDDCLKYCGV 55
>03_05_0730 +
27208293-27208813,27209052-27209173,27210429-27210477,
27210689-27210938,27211474-27211619,27211699-27211846,
27212544-27212612,27212641-27212784
Length = 482
Score = 25.8 bits (54), Expect = 7.1
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -1
Query: 276 HGFHHQKLKLTEREEAAPKMPRGQRFSL 193
H HH++ ++ R+ AAP R R +L
Sbjct: 43 HHHHHRRRRVYRRQRAAPTQTRAPRRTL 70
>01_06_0373 - 28841462-28842850
Length = 462
Score = 25.8 bits (54), Expect = 7.1
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 207 VLSAFSVLPPLAQLALASDGETHEELLKAIGFP 305
+L+ F LP L A+ GE EEL+ A G P
Sbjct: 125 ILAFFLYLPVLHAQTTANFGEMGEELVHAPGIP 157
>12_01_0550 - 4411926-4412207,4414661-4414774
Length = 131
Score = 25.4 bits (53), Expect = 9.4
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +2
Query: 14 AAGIRHEDSRDAGHKHEDNHLFVYYRHRGNGSRHK 118
AA +D D G H+D Y RH G G R +
Sbjct: 81 AADSSSDDDLDIGCFHDDYAGKSYCRHHGGGRRRR 115
>06_03_0611 -
22721977-22722276,22722765-22722853,22722978-22723083,
22723178-22723306,22723803-22723887,22723994-22724103,
22724424-22724624,22725033-22725394,22725612-22725695,
22725791-22725916,22725999-22726161,22726378-22726536,
22727147-22727274,22727371-22727493,22727755-22727899,
22727992-22728068,22728318-22728696,22729325-22729411
Length = 950
Score = 25.4 bits (53), Expect = 9.4
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -2
Query: 152 VIVSIFEHIREICDGCHCRDGDSKQTNDCLHVCGLRLS 39
VI S+ + + C GC C D + T C +VCG++ S
Sbjct: 56 VINSVLDKPKFRC-GCKCVDVNG--TGSCQNVCGIQYS 90
>02_02_0421 -
10042184-10042197,10042442-10042822,10044158-10044261,
10044634-10044734,10044806-10045147,10045981-10046158,
10047696-10047776,10049190-10049449
Length = 486
Score = 25.4 bits (53), Expect = 9.4
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -2
Query: 125 REICDGCHCRDGDSKQTND 69
R CDGCHC +K N+
Sbjct: 122 RVYCDGCHCSPCGNKIENE 140
>01_06_1406 -
37073548-37073822,37073892-37074111,37074200-37074246,
37074404-37074576,37075161-37075238,37075751-37075813,
37075889-37075961,37076150-37076189,37076302-37076368,
37076719-37078472,37079128-37079230,37080041-37080078,
37080221-37080347,37081944-37082152
Length = 1088
Score = 25.4 bits (53), Expect = 9.4
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 79 CLLSPSRQWQPSQISLMCSKMETITSQPE 165
CLL+PS + P Q + C+K ++QP+
Sbjct: 189 CLLAPSEEGHPHQSLVACNKYNP-SNQPK 216
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,970,401
Number of Sequences: 37544
Number of extensions: 174548
Number of successful extensions: 538
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 533
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 537
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 386885760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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