Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0150
         (606 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    25   1.9  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    25   1.9  
DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide...    23   7.7  
AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.            23   7.7  

>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
 Frame = +2

Query: 92  SLTMSLWIKENCVSFFQLF--CIKVIKTGR 175
           S+   +W+  +C SFFQ F  C   +K GR
Sbjct: 391 SVNAGMWMWLSCSSFFQQFFHCYCPVKFGR 420



 Score = 23.8 bits (49), Expect = 4.4
 Identities = 11/45 (24%), Positives = 23/45 (51%)
 Frame = +2

Query: 296 CLDLGIPEVTVYAFSIENFKRSKEEVDALMELAREKFQNLLDEID 430
           C +LGI  ++  + ++ N +R  E+      L   +FQ ++  +D
Sbjct: 118 CKELGIEVISAASHTLYNLERIIEKNGGRAPLTYHQFQAIIASMD 162


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 14/58 (24%), Positives = 27/58 (46%)
 Frame = +2

Query: 269 DKLSETLKWCLDLGIPEVTVYAFSIENFKRSKEEVDALMELAREKFQNLLDEIDQIDE 442
           ++LSE  KW       E  +Y   ++  ++  EE+D   + + +K   L  EI +  +
Sbjct: 208 EELSEYQKWDKARRTLEYVIYETELKETRKQLEELDGQRKSSGDKQLLLTQEIQKAQD 265


>DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide F
           receptor protein.
          Length = 575

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = -3

Query: 454 SYTPLINLINFIQEILEFFSS-QFHKCINFFFASLKVFYAECINSYL 317
           S+ PL N++N   +     +S +F+  I FF A L    + C N +L
Sbjct: 335 SWLPL-NVVNMCNDFNSDINSWRFYNLI-FFIAHLTAMSSTCYNPFL 379


>AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.
          Length = 722

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -1

Query: 153 MQNSWKNDTQFSFIHKDIVKEF 88
           +Q  W N+T   FIHK   +++
Sbjct: 541 LQVLWVNNTIIGFIHKSTAEKY 562


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 668,573
Number of Sequences: 2352
Number of extensions: 14724
Number of successful extensions: 25
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58870980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)