Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0150
(606 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92811-2|CAI46583.1| 299|Caenorhabditis elegans Hypothetical pr... 145 2e-35
AF016418-3|AAK18905.1| 210|Caenorhabditis elegans Hypothetical ... 33 0.16
U64598-12|AAX88835.1| 408|Caenorhabditis elegans Choline kinase... 32 0.28
U64598-11|AAK39220.1| 429|Caenorhabditis elegans Choline kinase... 32 0.28
Z48544-7|CAA88440.1| 249|Caenorhabditis elegans Hypothetical pr... 31 0.48
Z48045-2|CAA88100.2| 967|Caenorhabditis elegans Hypothetical pr... 31 0.84
AF435952-1|AAL30828.1| 967|Caenorhabditis elegans Ser/Thr prote... 31 0.84
AL132948-15|CAD31816.1| 1352|Caenorhabditis elegans Hypothetical... 29 2.6
AL132943-4|CAB81975.1| 690|Caenorhabditis elegans Hypothetical ... 29 2.6
AL132853-4|CAB60442.1| 1293|Caenorhabditis elegans Hypothetical ... 29 2.6
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 29 3.4
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 29 3.4
AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical... 28 4.5
Z29117-2|CAA82374.1| 216|Caenorhabditis elegans Hypothetical pr... 28 5.9
AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical ... 28 5.9
AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical ... 28 5.9
AC084153-16|AAK84590.1| 233|Caenorhabditis elegans Hypothetical... 28 5.9
AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein. 28 5.9
AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein. 28 5.9
CU457741-1|CAM36342.1| 347|Caenorhabditis elegans Hypothetical ... 27 7.9
>Z92811-2|CAI46583.1| 299|Caenorhabditis elegans Hypothetical
protein T01G1.4 protein.
Length = 299
Score = 145 bits (351), Expect = 2e-35
Identities = 73/156 (46%), Positives = 104/156 (66%), Gaps = 1/156 (0%)
Frame = +2
Query: 134 FFQLFCIKVIKTGRVPQHIAFIMDGNRRYAK-KNSVDKSTGHHKGFDKLSETLKWCLDLG 310
++Q + I +G +P+H+AF+MDGNRR+AK K+ + GH KGF +L++ L WC G
Sbjct: 22 WWQWLLRRFIASGPIPRHVAFVMDGNRRFAKTKHLGNVIKGHEKGFTQLAKILDWCNRFG 81
Query: 311 IPEVTVYAFSIENFKRSKEEVDALMELAREKFQNLLDEIDQIDEWGVRVHVAGRLSLLPE 490
I E+TVYAFSIENFKRS+EEV LM LA EKFQ LL++ +++DE + G SLL
Sbjct: 82 IREITVYAFSIENFKRSEEEVSGLMRLAEEKFQKLLNDSEKLDEKRICFRFYGNRSLLSS 141
Query: 491 HLRSLVSKVMLATKDNNRLCLNIAYAYTGRDEISRA 598
L+ L+S + T++ + LN+ YT RDEI+R+
Sbjct: 142 RLQKLMSDIEHRTENFDGGRLNVCMPYTSRDEIARS 177
>AF016418-3|AAK18905.1| 210|Caenorhabditis elegans Hypothetical
protein C49G7.10 protein.
Length = 210
Score = 33.1 bits (72), Expect = 0.16
Identities = 19/62 (30%), Positives = 37/62 (59%)
Frame = +2
Query: 260 KGFDKLSETLKWCLDLGIPEVTVYAFSIENFKRSKEEVDALMELAREKFQNLLDEIDQID 439
K ++KL + K+C G + + ++ +++R K DAL+ L EKF+ L +E+D +D
Sbjct: 138 KNYEKL-QAPKFCP--GSSDRNLTHRTLTHWRRVKRMRDALLSLRYEKFEVLDEEVDMVD 194
Query: 440 EW 445
++
Sbjct: 195 DY 196
>U64598-12|AAX88835.1| 408|Caenorhabditis elegans Choline kinase a
protein 2, isoformb protein.
Length = 408
Score = 32.3 bits (70), Expect = 0.28
Identities = 12/50 (24%), Positives = 25/50 (50%)
Frame = +2
Query: 254 HHKGFDKLSETLKWCLDLGIPEVTVYAFSIENFKRSKEEVDALMELAREK 403
+++ FD + ++W +D I E Y ENF + + ++ + RE+
Sbjct: 287 NYRAFDFANHFIEWTIDYDIDEAPFYKIQTENFPENDQMLEFFLNYLREQ 336
>U64598-11|AAK39220.1| 429|Caenorhabditis elegans Choline kinase a
protein 2, isoforma protein.
Length = 429
Score = 32.3 bits (70), Expect = 0.28
Identities = 12/50 (24%), Positives = 25/50 (50%)
Frame = +2
Query: 254 HHKGFDKLSETLKWCLDLGIPEVTVYAFSIENFKRSKEEVDALMELAREK 403
+++ FD + ++W +D I E Y ENF + + ++ + RE+
Sbjct: 308 NYRAFDFANHFIEWTIDYDIDEAPFYKIQTENFPENDQMLEFFLNYLREQ 357
>Z48544-7|CAA88440.1| 249|Caenorhabditis elegans Hypothetical
protein ZK945.7 protein.
Length = 249
Score = 31.5 bits (68), Expect = 0.48
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +2
Query: 257 HKGFDKLSETLKWCLDLGIPEVTVYAFSIENFKRSK--EEVDALMELAREKFQNLLDEID 430
H FD + + +LGIP+ V NF +K + ++ L +L +KFQ + + D
Sbjct: 163 HPTFDTTAYVERLQAELGIPDSKVIGLECSNFSNAKIIDSIECLHQL--DKFQPIPVDFD 220
Query: 431 QIDEWG 448
Q ++G
Sbjct: 221 QNPDFG 226
>Z48045-2|CAA88100.2| 967|Caenorhabditis elegans Hypothetical
protein C41C4.4 protein.
Length = 967
Score = 30.7 bits (66), Expect = 0.84
Identities = 18/73 (24%), Positives = 33/73 (45%)
Frame = +2
Query: 227 KNSVDKSTGHHKGFDKLSETLKWCLDLGIPEVTVYAFSIENFKRSKEEVDALMELAREKF 406
K+ S G+ FD+ + ++W DL P V +Y + + EV + +E
Sbjct: 208 KHYASSSHGYILTFDRETGEMRWEQDLKQPVVALYLLRDDGLHKLPFEV-----MGKETM 262
Query: 407 QNLLDEIDQIDEW 445
+N+ I +D+W
Sbjct: 263 ENVAKNIFTVDQW 275
>AF435952-1|AAL30828.1| 967|Caenorhabditis elegans Ser/Thr protein
kinase protein.
Length = 967
Score = 30.7 bits (66), Expect = 0.84
Identities = 18/73 (24%), Positives = 33/73 (45%)
Frame = +2
Query: 227 KNSVDKSTGHHKGFDKLSETLKWCLDLGIPEVTVYAFSIENFKRSKEEVDALMELAREKF 406
K+ S G+ FD+ + ++W DL P V +Y + + EV + +E
Sbjct: 208 KHYASSSHGYILTFDRETGEMRWEQDLKQPVVALYLLRDDGLHKLPFEV-----MGKETM 262
Query: 407 QNLLDEIDQIDEW 445
+N+ I +D+W
Sbjct: 263 ENVAKNIFTVDQW 275
>AL132948-15|CAD31816.1| 1352|Caenorhabditis elegans Hypothetical
protein Y39B6A.18 protein.
Length = 1352
Score = 29.1 bits (62), Expect = 2.6
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 351 LREAKKKLM-HLWNWLEKNSKISWMKLIKLMSGVYEY 458
L EA K L H WN ++ NS++ WM L + + EY
Sbjct: 1255 LTEALKHLHEHRWNGVQTNSQLYWMTLGTMYRLIKEY 1291
>AL132943-4|CAB81975.1| 690|Caenorhabditis elegans Hypothetical
protein Y116F11B.7 protein.
Length = 690
Score = 29.1 bits (62), Expect = 2.6
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Frame = +2
Query: 371 VDALMELAREKFQNLLDEIDQIDEWGVRVHVAGRLSLLPEH-LRSLVSKVMLATKD---N 538
+D + E EK+ + L +I+ V +HV L LP+H R V+++ A D +
Sbjct: 293 LDHMNERQFEKYFDELLSFAKIESNDVNIHVTSALRSLPQHATRQKVAQLFEALGDKILD 352
Query: 539 NRLCLNIAYAY 571
L LN++ AY
Sbjct: 353 LALILNLSLAY 363
>AL132853-4|CAB60442.1| 1293|Caenorhabditis elegans Hypothetical
protein Y80D3A.8 protein.
Length = 1293
Score = 29.1 bits (62), Expect = 2.6
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 351 LREAKKKLM-HLWNWLEKNSKISWMKLIKLMSGVYEY 458
L EA K + H WN ++KN ++ WM L + + EY
Sbjct: 1226 LTEALKHMREHRWNGIQKNFQLYWMTLGTMYRLIKEY 1262
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 28.7 bits (61), Expect = 3.4
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +1
Query: 112 DKRKLCIIFPTILHQSNKDRPSTPTHSIHNGWKQTLREKK 231
DK K I P ++S+ D PSTP H K T E K
Sbjct: 810 DKPKKVSIAPVSTNKSSDDEPSTPRHHKEVEEKSTSEELK 849
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 28.7 bits (61), Expect = 3.4
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +1
Query: 112 DKRKLCIIFPTILHQSNKDRPSTPTHSIHNGWKQTLREKK 231
DK K I P ++S+ D PSTP H K T E K
Sbjct: 810 DKPKKVSIAPVSTNKSSDDEPSTPRHHKEVEEKSTSEELK 849
>AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical
protein Y39B6A.30 protein.
Length = 1408
Score = 28.3 bits (60), Expect = 4.5
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 351 LREAKKKLM-HLWNWLEKNSKISWMKLIKLMSGVYEY 458
L EA K + H WN ++ NS++ WM L + + EY
Sbjct: 1307 LTEALKHVREHRWNGVQTNSQLYWMTLGTMYRLIKEY 1343
>Z29117-2|CAA82374.1| 216|Caenorhabditis elegans Hypothetical
protein C48B4.3 protein.
Length = 216
Score = 27.9 bits (59), Expect = 5.9
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +1
Query: 151 HQSNKDRPSTPTHSIHNGWKQTLREK 228
H N RP++PTH I N +R+K
Sbjct: 162 HDKNLSRPNSPTHFIANSIPTLIRKK 187
>AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical
protein H30A04.1b protein.
Length = 810
Score = 27.9 bits (59), Expect = 5.9
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 506 LNFSSAPVTMRVAQPHVLVHPTHQ 435
+ F++ T+ V QP V V PTHQ
Sbjct: 429 VTFTATSTTLMVTQPTVTVSPTHQ 452
>AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical
protein H30A04.1a protein.
Length = 808
Score = 27.9 bits (59), Expect = 5.9
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 506 LNFSSAPVTMRVAQPHVLVHPTHQ 435
+ F++ T+ V QP V V PTHQ
Sbjct: 429 VTFTATSTTLMVTQPTVTVSPTHQ 452
>AC084153-16|AAK84590.1| 233|Caenorhabditis elegans Hypothetical
protein Y22D7AL.16 protein.
Length = 233
Score = 27.9 bits (59), Expect = 5.9
Identities = 7/19 (36%), Positives = 14/19 (73%)
Frame = -2
Query: 593 CLFHHDLCRHKQCSNKACC 537
C++ H++CR++ NK+ C
Sbjct: 190 CIYSHNMCRYEDTCNKSTC 208
>AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein.
Length = 810
Score = 27.9 bits (59), Expect = 5.9
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 506 LNFSSAPVTMRVAQPHVLVHPTHQ 435
+ F++ T+ V QP V V PTHQ
Sbjct: 429 VTFTATSTTLMVTQPTVTVSPTHQ 452
>AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein.
Length = 808
Score = 27.9 bits (59), Expect = 5.9
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 506 LNFSSAPVTMRVAQPHVLVHPTHQ 435
+ F++ T+ V QP V V PTHQ
Sbjct: 429 VTFTATSTTLMVTQPTVTVSPTHQ 452
>CU457741-1|CAM36342.1| 347|Caenorhabditis elegans Hypothetical
protein C42C1.1 protein.
Length = 347
Score = 27.5 bits (58), Expect = 7.9
Identities = 12/46 (26%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +2
Query: 35 FSRTVLFLRLCTPIFALVNSLTMSLWIKENCVSFFQL-FCIKVIKT 169
F+ ++ F + P+ LV S + + + C++ F+L F + I T
Sbjct: 223 FASSIFFFTILCPVLMLVASFEIDWFYRNLCITLFELSFSVYTILT 268
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,575,325
Number of Sequences: 27780
Number of extensions: 317226
Number of successful extensions: 1266
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1222
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1265
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1300523034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -