Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0149
         (678 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8TSL1 Cluster: Proteophosphoglycan; n=2; cellular orga...    34   2.8  
UniRef50_Q8D243 Cluster: UDP-N-acetylenolpyruvoylglucosamine red...    34   2.8  
UniRef50_Q7RK75 Cluster: Putative uncharacterized protein PY0302...    33   8.4  

>UniRef50_Q8TSL1 Cluster: Proteophosphoglycan; n=2; cellular
           organisms|Rep: Proteophosphoglycan - Methanosarcina
           acetivorans
          Length = 146

 Score = 34.3 bits (75), Expect = 2.8
 Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
 Frame = +1

Query: 481 IYFHS*NYFSRFFQAFLFLSFMIKYKYTERFI--DLSIRYHCLAYFTVNQSFV 633
           ++F   N+FS FF +F   +F + Y +   F   +  + Y  ++YF V+  FV
Sbjct: 7   LHFFFSNFFSNFFSSFFVSNFFVSYFFFSSFFVSNFFVSYFFVSYFFVSYFFV 59


>UniRef50_Q8D243 Cluster: UDP-N-acetylenolpyruvoylglucosamine
           reductase; n=1; Wigglesworthia glossinidia endosymbiont
           of Glossina brevipalpis|Rep:
           UDP-N-acetylenolpyruvoylglucosamine reductase -
           Wigglesworthia glossinidia brevipalpis
          Length = 340

 Score = 34.3 bits (75), Expect = 2.8
 Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
 Frame = -2

Query: 224 YFHFFFMLVYLAIEGSGLQCH*GYREYIFTITLS-FNVKKIFVLIKHMYLVRKKFELCCN 48
           Y  F F+     +  S  +C+ GYR+ IF  +   FN   + + +K    ++KK++ C N
Sbjct: 132 YVDFIFLETGEKVRLSSQECNFGYRKSIFNSSKKFFNYAIVAIGLK----LKKKWKACLN 187

Query: 47  LKFHSVLQREYIN 9
               S L++EY++
Sbjct: 188 YTDLSFLEKEYVS 200


>UniRef50_Q7RK75 Cluster: Putative uncharacterized protein PY03028;
           n=1; Plasmodium yoelii yoelii|Rep: Putative
           uncharacterized protein PY03028 - Plasmodium yoelii
           yoelii
          Length = 419

 Score = 32.7 bits (71), Expect = 8.4
 Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
 Frame = +1

Query: 382 NLVRFS-TKIQVVDHYLFLHYNMVHIIFVARYKKIYFHS*NYFSRFFQAFLFLSFMIKYK 558
           NL+ +  TK     + L + Y   + I  + Y  I+FH+  + S FF  FL  S  + YK
Sbjct: 74  NLIFYEKTKKYFYKNKLNIDY-FTYFITTSFYIFIHFHNIYFSSTFFNIFLTFSIKLAYK 132

Query: 559 YT 564
           YT
Sbjct: 133 YT 134


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 573,952,523
Number of Sequences: 1657284
Number of extensions: 10715169
Number of successful extensions: 22892
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21833
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22833
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52479343733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)