Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0149
         (678 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    26   0.33 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    26   0.33 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    26   0.33 
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    22   4.0  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    22   4.0  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   4.0  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    21   7.0  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   9.3  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   9.3  

>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 25.8 bits (54), Expect = 0.33
 Identities = 9/33 (27%), Positives = 20/33 (60%)
 Frame = +1

Query: 226 FSMFYFEFLNWLI*NVGNVLELILSFEESKCLN 324
           F+ FY +   W+   + N+L+L++ +E +  +N
Sbjct: 610 FNEFYNQRRRWMPSTMANILDLLMDYEHTVKIN 642


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 25.8 bits (54), Expect = 0.33
 Identities = 9/33 (27%), Positives = 20/33 (60%)
 Frame = +1

Query: 226 FSMFYFEFLNWLI*NVGNVLELILSFEESKCLN 324
           F+ FY +   W+   + N+L+L++ +E +  +N
Sbjct: 843 FNEFYNQRRRWMPSTMANILDLLMDYEHTVKIN 875


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 25.8 bits (54), Expect = 0.33
 Identities = 9/33 (27%), Positives = 20/33 (60%)
 Frame = +1

Query: 226 FSMFYFEFLNWLI*NVGNVLELILSFEESKCLN 324
           F+ FY +   W+   + N+L+L++ +E +  +N
Sbjct: 843 FNEFYNQRRRWMPSTMANILDLLMDYEHTVKIN 875


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = +3

Query: 195 INQHKKKMKIFFNVLLRISKLVNLECRQCIRINLKF 302
           +N+H + ++  F  L +    +NLE    I+  +KF
Sbjct: 468 LNEHLEHLRQVFEKLKQARMTINLEKSNFIQKEVKF 503


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -3

Query: 235 TLKNIFIFFLCW 200
           TL  +F+F LCW
Sbjct: 288 TLVIVFVFVLCW 299


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 15/48 (31%), Positives = 26/48 (54%)
 Frame = -2

Query: 200 VYLAIEGSGLQCH*GYREYIFTITLSFNVKKIFVLIKHMYLVRKKFEL 57
           VYLAI  +GL       +    +TLS + KK ++L + + + +  +EL
Sbjct: 309 VYLAIVFNGLFTEEDVADVPINVTLSLDEKK-YILQEVVRVKKPHYEL 355


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +1

Query: 577 DLSIRYHCLAY 609
           D SI Y+CLAY
Sbjct: 433 DCSIFYYCLAY 443


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +3

Query: 189 CKINQHKKKMKIFFNVLLRISKLV 260
           C ++QH  K    FN +  +S LV
Sbjct: 227 CYLHQHLSKSVKLFNEVFGVSLLV 250


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +3

Query: 189 CKINQHKKKMKIFFNVLLRISKLV 260
           C ++QH  K    FN +  +S LV
Sbjct: 245 CYLHQHLSKSVKLFNEVFGVSLLV 268


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,076
Number of Sequences: 336
Number of extensions: 3268
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)