Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0149
         (678 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   2.7  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   2.7  
AY526236-1|AAS20469.1|   85|Apis mellifera epoxide hydrolase pro...    22   4.7  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 10/38 (26%), Positives = 21/38 (55%)
 Frame = -3

Query: 499 FSYGNIFFYIVQQRLCAPYYSEEINSGRLLGSL*KNEL 386
           +++G +F+Y+    +  PY  E+ ++  LL +  K  L
Sbjct: 777 YAFGILFWYLCAGHVRLPYTFEQFHNKELLWTSVKKAL 814


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 10/38 (26%), Positives = 21/38 (55%)
 Frame = -3

Query: 499 FSYGNIFFYIVQQRLCAPYYSEEINSGRLLGSL*KNEL 386
           +++G +F+Y+    +  PY  E+ ++  LL +  K  L
Sbjct: 815 YAFGILFWYLCAGHVRLPYTFEQFHNKELLWTSVKKAL 852


>AY526236-1|AAS20469.1|   85|Apis mellifera epoxide hydrolase
           protein.
          Length = 85

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
 Frame = +1

Query: 388 VRFSTKIQVVDHYLFLHYNMVHI--IFVARYKKIYFHS*NYFSRFFQAFLFLSFMIK 552
           V F  KI  + + +    N+ ++  +FV  Y      +  ++S+FF     LSF+I+
Sbjct: 15  VLFPEKIIGLHNNMCTSLNLSNLFWLFVGTYFPSLIGANEHYSKFFPVSEILSFLIE 71


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,918
Number of Sequences: 438
Number of extensions: 3755
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20586735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)