Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0148
(685 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_20550| Best HMM Match : Phosphodiest (HMM E-Value=0) 31 0.66
SB_2903| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_22214| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_7197| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_3631| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_44205| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_11435| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_8898| Best HMM Match : WSC (HMM E-Value=6.4) 29 2.7
SB_27903| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_14926| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_34510| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_42017| Best HMM Match : DUF1421 (HMM E-Value=0.43) 29 4.6
SB_22742| Best HMM Match : ubiquitin (HMM E-Value=0.01) 28 6.1
SB_44560| Best HMM Match : DUF1086 (HMM E-Value=1.2) 28 6.1
SB_5169| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_59238| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_56430| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_46691| Best HMM Match : DUF765 (HMM E-Value=9.5) 28 8.1
SB_42990| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_54757| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_50032| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_47635| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_43613| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_43412| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_38326| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_31108| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_30632| Best HMM Match : Acyltransferase (HMM E-Value=0.0097) 28 8.1
SB_29978| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_24786| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_21994| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_19004| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_18933| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_9069| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_8174| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_4560| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
>SB_20550| Best HMM Match : Phosphodiest (HMM E-Value=0)
Length = 579
Score = 31.5 bits (68), Expect = 0.66
Identities = 18/70 (25%), Positives = 34/70 (48%)
Frame = +2
Query: 86 EIKEENNDKGDIFYASCDEDNDCVTIELPCEEEIPVQTEIDSVKNDSSAITLECDMKMLS 265
E+ ENN IF++S D DN C + C + V E++ K ++ + C ++ +S
Sbjct: 490 EVLPENN----IFHSSYDRDNVCTSNGETCSPFLFVDVEVEHKKVENVPLAYGCPIRDIS 545
Query: 266 PMTLSPKSVE 295
+S++
Sbjct: 546 KYLARNESIQ 555
>SB_2903| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -1
Query: 73 CVCVGMSIRVLCQPRAEFLQPGGS 2
C V +++ VLC EFLQPGGS
Sbjct: 22 CCKVYLNVNVLCPVLIEFLQPGGS 45
>SB_22214| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 150
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -2
Query: 48 ECCASLVPNSCSPGDP 1
+CC S NSCSPGDP
Sbjct: 20 DCCRSRGSNSCSPGDP 35
>SB_7197| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 143
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -1
Query: 67 CVGMSIRVLCQPRAEFLQPGGS 2
CVG R++ + EFLQPGGS
Sbjct: 7 CVGYGYRLITRETIEFLQPGGS 28
>SB_3631| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 256
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 2 GSPGLQEFGTRLAQHSYAHPYTHAADLLEIKE 97
GSPGLQEF R HPY + D L + +
Sbjct: 16 GSPGLQEFDKRAECPELLHPYWNYRDELTVAD 47
>SB_44205| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 611
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/41 (43%), Positives = 24/41 (58%)
Frame = -3
Query: 362 TITTRSLSQSSGWCAPETRANYLPPTSETGSSARASSCRTP 240
T T + SS CA +TR+N +S TG++ AS CRTP
Sbjct: 232 TSTNTRANTSSNTCA-DTRSN-TSTSSYTGTNTSASYCRTP 270
>SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4856
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +2
Query: 92 KEENNDKGDIFYASCDEDNDCVTIELPCEEEIPVQTE 202
+E N GD+ Y C++ D ++E E+E+P +E
Sbjct: 2529 QETNKGDGDMLYRQCEQAEDTNSVEF-YEDEVPSSSE 2564
>SB_11435| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 618
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +3
Query: 3 DPPGCRNSARG-WHNTLMLIPTHTQQTFSKSK--RRTTIKATYSTQAVTKIMIAS 158
+PP +N++ H L LI H ++ SK R TIK +YS + TK +I S
Sbjct: 87 NPPFSKNTSTNIGHRFLSLIDKHFRKDHKLSKIFNRNTIKISYSCMSNTKQIIDS 141
>SB_8898| Best HMM Match : WSC (HMM E-Value=6.4)
Length = 165
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = -3
Query: 215 SPNQSLSELGFLLRREVLS*RNHYLRHSLRRICRLYR-CSPL*FREGLLRVCRDEHKSVV 39
+P ++ +E+ + + E + + H+L S R+CR YR C F + C ++ +
Sbjct: 5 NPGEAENEVAEVEKDENVPEKRHHLYRSCHRVCRRYRYCKSFLF---IKHKCHYKYHCYL 61
Query: 38 PASCRI 21
SC++
Sbjct: 62 KCSCKV 67
>SB_27903| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -2
Query: 48 ECCASLVPNSCSPGDP 1
+C SL NSCSPGDP
Sbjct: 1 QCHVSLSSNSCSPGDP 16
>SB_14926| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1638
Score = 29.1 bits (62), Expect = 3.5
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = +3
Query: 3 DPPGCRNSARG-WHNTLMLIPTH--TQQTFSKSKRRTTIKATYSTQAVTKIMI 152
+PP +N++ H L LI H Q K R TIK +YS+ + TK +I
Sbjct: 44 NPPFSKNTSTNIGHRFLFLIDKHFPKDQKLRKIFNRNTIKISYSSMSSTKQII 96
>SB_34510| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1845
Score = 28.7 bits (61), Expect = 4.6
Identities = 9/33 (27%), Positives = 21/33 (63%)
Frame = -3
Query: 428 IAPTRIPTKDLATPLNQIH*AVTITTRSLSQSS 330
+ P+++P +D+ P+ ++ + TT+ L +SS
Sbjct: 1174 LTPSKVPVRDVTVPVRELRNSTRKTTKELKKSS 1206
>SB_42017| Best HMM Match : DUF1421 (HMM E-Value=0.43)
Length = 565
Score = 28.7 bits (61), Expect = 4.6
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = -3
Query: 440 PVQGIAPTRIPTKDLATPLNQIH*AVTITTRSLSQSSGWCAPETRANYLPPTSETGSSAR 261
P IAP++ ATP +Q A T T +S + P+++A++ P T S A
Sbjct: 242 PATKIAPSQATFASKATPQSQATFAATATPQSQASFPATKIPQSQASF-PATKIPQSQAT 300
Query: 260 ASSCRTPT 237
++ T T
Sbjct: 301 FAAITTKT 308
>SB_22742| Best HMM Match : ubiquitin (HMM E-Value=0.01)
Length = 792
Score = 28.3 bits (60), Expect = 6.1
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +2
Query: 173 CEEEIPVQTEIDSVKNDSSAITLECDMKMLSPMTLSPKSVEDNLLLSPA 319
CE+E+ T++ + D IT+E + S + SPK +++ SPA
Sbjct: 598 CEDELVKNTQLQTEDKDVVEITVEHLTETSSKIAKSPKEDYEHVEYSPA 646
>SB_44560| Best HMM Match : DUF1086 (HMM E-Value=1.2)
Length = 918
Score = 28.3 bits (60), Expect = 6.1
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = +3
Query: 3 DPPGCRNSARG-WHNTLMLIPTH--TQQTFSKSKRRTTIKATYSTQAVTKIMIAS 158
+PP +N++ H L LI H Q K R TIK +YS + TK +I S
Sbjct: 254 NPPFSKNTSTNIGHRFLSLIDKHFPKDQKLRKIFNRNTIKISYSCMSNTKQIIDS 308
>SB_5169| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 345
Score = 28.3 bits (60), Expect = 6.1
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +3
Query: 15 CRNSARG-WHNTLMLIPTHTQQTFSKSKRRT-TIKATYSTQAVTKIMIAS 158
C+N++ H L LI H +T + K T TIK +YS + TK +I S
Sbjct: 132 CKNTSPNIGHRFLSLIDKHFLKTTNSKKPSTETIKISYSCMSNTKQIIDS 181
>SB_59238| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 149
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -2
Query: 39 ASLVPNSCSPGDP 1
A LV NSCSPGDP
Sbjct: 22 AHLVSNSCSPGDP 34
>SB_56430| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -2
Query: 36 SLVPNSCSPGDP 1
SL+ NSCSPGDP
Sbjct: 32 SLISNSCSPGDP 43
>SB_46691| Best HMM Match : DUF765 (HMM E-Value=9.5)
Length = 139
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = -2
Query: 48 ECCASLVPNSCSPGDP 1
E AS V NSCSPGDP
Sbjct: 9 ERSASQVSNSCSPGDP 24
>SB_42990| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 148
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -1
Query: 64 VGMSIRVLCQPRAEFLQPGGS 2
+G+ ++ P EFLQPGGS
Sbjct: 13 IGLCVKSASSPMIEFLQPGGS 33
>SB_54757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -2
Query: 36 SLVPNSCSPGDP 1
SL+ NSCSPGDP
Sbjct: 32 SLISNSCSPGDP 43
>SB_50032| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -2
Query: 36 SLVPNSCSPGDP 1
SL+ NSCSPGDP
Sbjct: 32 SLISNSCSPGDP 43
>SB_47635| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -2
Query: 36 SLVPNSCSPGDP 1
SL+ NSCSPGDP
Sbjct: 32 SLISNSCSPGDP 43
>SB_43613| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -2
Query: 36 SLVPNSCSPGDP 1
SL+ NSCSPGDP
Sbjct: 32 SLISNSCSPGDP 43
>SB_43412| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -2
Query: 36 SLVPNSCSPGDP 1
SL+ NSCSPGDP
Sbjct: 32 SLISNSCSPGDP 43
>SB_38326| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 104
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 4/36 (11%)
Frame = +3
Query: 3 DPPGCRNSARGWHN----TLMLIPTHTQQTFSKSKR 98
DPPGCRNS R T++ P T T KS++
Sbjct: 17 DPPGCRNSIRSTTTITIFTIIKTPMTTTTTAFKSRK 52
>SB_31108| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -2
Query: 36 SLVPNSCSPGDP 1
SL+ NSCSPGDP
Sbjct: 32 SLISNSCSPGDP 43
>SB_30632| Best HMM Match : Acyltransferase (HMM E-Value=0.0097)
Length = 263
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -2
Query: 45 CCASLVPNSCSPGDP 1
CC L NSCSPGDP
Sbjct: 11 CCGEL-SNSCSPGDP 24
>SB_29978| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 136
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -2
Query: 45 CCASLVPNSCSPGDP 1
C L NSCSPGDP
Sbjct: 7 CTQELTSNSCSPGDP 21
>SB_24786| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 151
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -2
Query: 39 ASLVPNSCSPGDP 1
A LV NSCSPGDP
Sbjct: 24 ARLVSNSCSPGDP 36
>SB_21994| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -2
Query: 36 SLVPNSCSPGDP 1
SL+ NSCSPGDP
Sbjct: 33 SLISNSCSPGDP 44
>SB_19004| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 138
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -2
Query: 39 ASLVPNSCSPGDP 1
A++V NSCSPGDP
Sbjct: 11 ANIVSNSCSPGDP 23
>SB_18933| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -2
Query: 42 CASLVPNSCSPGDP 1
C S+ NSCSPGDP
Sbjct: 4 CWSVTSNSCSPGDP 17
>SB_9069| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -2
Query: 42 CASLVPNSCSPGDP 1
C L NSCSPGDP
Sbjct: 4 CEPLASNSCSPGDP 17
>SB_8174| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -2
Query: 36 SLVPNSCSPGDP 1
SL+ NSCSPGDP
Sbjct: 32 SLISNSCSPGDP 43
>SB_4560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -2
Query: 36 SLVPNSCSPGDP 1
SL+ NSCSPGDP
Sbjct: 30 SLISNSCSPGDP 41
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,589,429
Number of Sequences: 59808
Number of extensions: 393840
Number of successful extensions: 2641
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 2520
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2639
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1769412099
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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