BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0148
(685 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L46721-1|AAC41774.1| 164|Homo sapiens mucin protein. 32 2.2
AP001725-2|BAA95548.1| 2298|Homo sapiens C21orf5 protein. 32 2.2
AP000692-1|BAA89431.1| 2298|Homo sapiens C21orf5 protein. 32 2.2
AB023150-1|BAA76777.2| 2147|Homo sapiens KIAA0933 protein protein. 32 2.2
AY534911-1|AAT02709.1| 578|Homo sapiens hypothetical rhabdomyos... 31 2.9
AY028423-1|AAK27730.1| 852|Homo sapiens PRIP-interacting protei... 31 2.9
AF432215-1|AAL99922.1| 853|Homo sapiens CLL-associated antigen ... 31 2.9
BC034629-1|AAH34629.1| 211|Homo sapiens LYPD4 protein protein. 31 5.0
AY358726-1|AAQ89088.1| 246|Homo sapiens GPQH2552 protein. 31 5.0
DQ232883-1|ABB18376.1| 500|Homo sapiens tripartite motif protei... 30 8.8
BC047945-1|AAH47945.1| 500|Homo sapiens tripartite motif-contai... 30 8.8
BC039871-1|AAH39871.1| 757|Homo sapiens cell cycle progression ... 30 8.8
BC033314-1|AAH33314.1| 341|Homo sapiens tripartite motif-contai... 30 8.8
BC024199-1|AAH24199.1| 503|Homo sapiens TRIM69 protein protein. 30 8.8
BC015203-1|AAH15203.1| 470|Homo sapiens Unknown (protein for IM... 30 8.8
AK022459-1|BAB14042.1| 424|Homo sapiens protein ( Homo sapiens ... 30 8.8
AF302089-1|AAL55811.1| 279|Homo sapiens TRIMLESS beta protein. 30 8.8
AF302088-1|AAL55810.1| 296|Homo sapiens TRIMLESS alpha protein. 30 8.8
AF212228-1|AAK14914.1| 755|Homo sapiens CCP8 protein. 30 8.8
AB033080-1|BAA86568.2| 758|Homo sapiens KIAA1254 protein protein. 30 8.8
>L46721-1|AAC41774.1| 164|Homo sapiens mucin protein.
Length = 164
Score = 31.9 bits (69), Expect = 2.2
Identities = 26/78 (33%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = -3
Query: 431 GIAPTRIP-TKDLATPLNQIH*AVTITTRSLSQSSGWCAPETRANYLPPTSETGSSARAS 255
G P+ +P T + P A T +T S +S AP T + L PT+ T S+ S
Sbjct: 36 GTTPSPVPTTSTTSAPTTSTTSAPTTSTTSAPTTSTPSAP-TTSTTLAPTTSTTSAPTTS 94
Query: 254 SCRTPT*SLNYRSSPNQS 201
+ TPT S S+P S
Sbjct: 95 TTSTPTSSTT--STPQTS 110
>AP001725-2|BAA95548.1| 2298|Homo sapiens C21orf5 protein.
Length = 2298
Score = 31.9 bits (69), Expect = 2.2
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = -3
Query: 317 PETRANYLPPTSETGSSARASSCRTPT*SLNYRSSPNQSLSEL 189
P+ A+ P +SE SA SSC T + + + SSP+ L EL
Sbjct: 1096 PDRTAHGAPDSSEHTESADTSSCHTDSENTSSFSSPSHDLQEL 1138
>AP000692-1|BAA89431.1| 2298|Homo sapiens C21orf5 protein.
Length = 2298
Score = 31.9 bits (69), Expect = 2.2
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = -3
Query: 317 PETRANYLPPTSETGSSARASSCRTPT*SLNYRSSPNQSLSEL 189
P+ A+ P +SE SA SSC T + + + SSP+ L EL
Sbjct: 1096 PDRTAHGAPDSSEHTESADTSSCHTDSENTSSFSSPSHDLQEL 1138
>AB023150-1|BAA76777.2| 2147|Homo sapiens KIAA0933 protein protein.
Length = 2147
Score = 31.9 bits (69), Expect = 2.2
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = -3
Query: 317 PETRANYLPPTSETGSSARASSCRTPT*SLNYRSSPNQSLSEL 189
P+ A+ P +SE SA SSC T + + + SSP+ L EL
Sbjct: 945 PDRTAHGAPDSSEHTESADTSSCHTDSENTSSFSSPSHDLQEL 987
>AY534911-1|AAT02709.1| 578|Homo sapiens hypothetical
rhabdomyosarcoma antigen MU-RMS-40.15 protein.
Length = 578
Score = 31.5 bits (68), Expect = 2.9
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +2
Query: 86 EIKEENNDKGDIFYASCDEDNDCVTIELPCEEEIPVQTEIDSVKN 220
E++ EN ++ D A+ ++ DCVT E+P + + E+ KN
Sbjct: 306 ELETENYER-DSLLATVPDEQDCVTQEVPDSRQAETEAEVKKKKN 349
>AY028423-1|AAK27730.1| 852|Homo sapiens PRIP-interacting protein
PIPMT protein.
Length = 852
Score = 31.5 bits (68), Expect = 2.9
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +2
Query: 86 EIKEENNDKGDIFYASCDEDNDCVTIELPCEEEIPVQTEIDSVKN 220
E++ EN ++ D A+ ++ DCVT E+P + + E+ KN
Sbjct: 580 ELETENYER-DSLLATVPDEQDCVTQEVPDSRQAETEAEVKKKKN 623
>AF432215-1|AAL99922.1| 853|Homo sapiens CLL-associated antigen
KW-2 protein.
Length = 853
Score = 31.5 bits (68), Expect = 2.9
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +2
Query: 86 EIKEENNDKGDIFYASCDEDNDCVTIELPCEEEIPVQTEIDSVKN 220
E++ EN ++ D A+ ++ DCVT E+P + + E+ KN
Sbjct: 581 ELETENYER-DSLLATVPDEQDCVTQEVPDSRQAETEAEVKKKKN 624
>BC034629-1|AAH34629.1| 211|Homo sapiens LYPD4 protein protein.
Length = 211
Score = 30.7 bits (66), Expect = 5.0
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = -3
Query: 134 SLRRICRLYRCSPL*FREGLLRVCRDEHKSVVPASCRIPAARG 6
S R+CR Y C+ L E +++ KS+ ASC P G
Sbjct: 70 SYSRVCRSYLCNNLTNLEPFVKLKASTPKSITSASCSCPTCVG 112
>AY358726-1|AAQ89088.1| 246|Homo sapiens GPQH2552 protein.
Length = 246
Score = 30.7 bits (66), Expect = 5.0
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = -3
Query: 134 SLRRICRLYRCSPL*FREGLLRVCRDEHKSVVPASCRIPAARG 6
S R+CR Y C+ L E +++ KS+ ASC P G
Sbjct: 105 SYSRVCRSYLCNNLTNLEPFVKLKASTPKSITSASCSCPTCVG 147
>DQ232883-1|ABB18376.1| 500|Homo sapiens tripartite motif protein
69 protein.
Length = 500
Score = 29.9 bits (64), Expect = 8.8
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +2
Query: 260 LSPMTLSPKSVEDNLLLSPAHTNL 331
LSP+TL PK+ NL+LS + T++
Sbjct: 322 LSPLTLDPKTAHPNLVLSKSQTSV 345
>BC047945-1|AAH47945.1| 500|Homo sapiens tripartite
motif-containing 69 protein.
Length = 500
Score = 29.9 bits (64), Expect = 8.8
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +2
Query: 260 LSPMTLSPKSVEDNLLLSPAHTNL 331
LSP+TL PK+ NL+LS + T++
Sbjct: 322 LSPLTLDPKTAHPNLVLSKSQTSV 345
>BC039871-1|AAH39871.1| 757|Homo sapiens cell cycle progression 1
protein.
Length = 757
Score = 29.9 bits (64), Expect = 8.8
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = +2
Query: 26 GTRLAQHSYAHPYTHAADLLEIKEENNDKGDIFYASCDEDNDCVTIELPCEEEI 187
GT L + + + +E +E+ + I+ + +D+D VT+E P EEI
Sbjct: 64 GTVLMEETAYPALEETSSTIEAEEQKIPEDSIYIGTASDDSDIVTLEPPKLEEI 117
>BC033314-1|AAH33314.1| 341|Homo sapiens tripartite
motif-containing 69 protein.
Length = 341
Score = 29.9 bits (64), Expect = 8.8
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +2
Query: 260 LSPMTLSPKSVEDNLLLSPAHTNL 331
LSP+TL PK+ NL+LS + T++
Sbjct: 163 LSPLTLDPKTAHPNLVLSKSQTSV 186
>BC024199-1|AAH24199.1| 503|Homo sapiens TRIM69 protein protein.
Length = 503
Score = 29.9 bits (64), Expect = 8.8
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +2
Query: 260 LSPMTLSPKSVEDNLLLSPAHTNL 331
LSP+TL PK+ NL+LS + T++
Sbjct: 322 LSPLTLDPKTAHPNLVLSKSQTSV 345
>BC015203-1|AAH15203.1| 470|Homo sapiens Unknown (protein for
IMAGE:3916446) protein.
Length = 470
Score = 29.9 bits (64), Expect = 8.8
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = +2
Query: 26 GTRLAQHSYAHPYTHAADLLEIKEENNDKGDIFYASCDEDNDCVTIELPCEEEI 187
GT L + + + +E +E+ + I+ + +D+D VT+E P EEI
Sbjct: 64 GTVLMEETAYPALEETSSTIEAEEQKIPEDSIYIGTASDDSDIVTLEPPKLEEI 117
>AK022459-1|BAB14042.1| 424|Homo sapiens protein ( Homo sapiens
cDNA FLJ12397 fis, clone MAMMA1002769, weakly similar to
Homo sapiens cell cycle progression restoration 8
protein ).
Length = 424
Score = 29.9 bits (64), Expect = 8.8
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = +2
Query: 26 GTRLAQHSYAHPYTHAADLLEIKEENNDKGDIFYASCDEDNDCVTIELPCEEEI 187
GT L + + + +E +E+ + I+ + +D+D VT+E P EEI
Sbjct: 64 GTVLMEETAYPALEETSSTIEAEEQKIPEDSIYIGTASDDSDIVTLEPPKLEEI 117
>AF302089-1|AAL55811.1| 279|Homo sapiens TRIMLESS beta protein.
Length = 279
Score = 29.9 bits (64), Expect = 8.8
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +2
Query: 260 LSPMTLSPKSVEDNLLLSPAHTNL 331
LSP+TL PK+ NL+LS + T++
Sbjct: 101 LSPLTLDPKTAHPNLVLSKSQTSV 124
>AF302088-1|AAL55810.1| 296|Homo sapiens TRIMLESS alpha protein.
Length = 296
Score = 29.9 bits (64), Expect = 8.8
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +2
Query: 260 LSPMTLSPKSVEDNLLLSPAHTNL 331
LSP+TL PK+ NL+LS + T++
Sbjct: 118 LSPLTLDPKTAHPNLVLSKSQTSV 141
>AF212228-1|AAK14914.1| 755|Homo sapiens CCP8 protein.
Length = 755
Score = 29.9 bits (64), Expect = 8.8
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = +2
Query: 26 GTRLAQHSYAHPYTHAADLLEIKEENNDKGDIFYASCDEDNDCVTIELPCEEEI 187
GT L + + + +E +E+ + I+ + +D+D VT+E P EEI
Sbjct: 64 GTVLMEETAYPALEETSSTIEAEEQKIPEDSIYIGTASDDSDIVTLEPPKLEEI 117
>AB033080-1|BAA86568.2| 758|Homo sapiens KIAA1254 protein protein.
Length = 758
Score = 29.9 bits (64), Expect = 8.8
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = +2
Query: 26 GTRLAQHSYAHPYTHAADLLEIKEENNDKGDIFYASCDEDNDCVTIELPCEEEI 187
GT L + + + +E +E+ + I+ + +D+D VT+E P EEI
Sbjct: 65 GTVLMEETAYPALEETSSTIEAEEQKIPEDSIYIGTASDDSDIVTLEPPKLEEI 118
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,548,668
Number of Sequences: 237096
Number of extensions: 1800674
Number of successful extensions: 4338
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 4091
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4335
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7783251346
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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