Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0147
         (716 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29537-7|AAO38649.1|  239|Caenorhabditis elegans Egg laying defe...    28   7.7  
U29537-6|AAO38648.1|  340|Caenorhabditis elegans Egg laying defe...    28   7.7  
U29537-5|AAO38650.1|  414|Caenorhabditis elegans Egg laying defe...    28   7.7  
U29537-4|AAO38647.1|  450|Caenorhabditis elegans Egg laying defe...    28   7.7  
U29537-3|AAO38646.1|  457|Caenorhabditis elegans Egg laying defe...    28   7.7  
U29537-2|AAK31508.1|  465|Caenorhabditis elegans Egg laying defe...    28   7.7  
AF283982-1|AAG13397.1|  471|Caenorhabditis elegans transcription...    28   7.7  

>U29537-7|AAO38649.1|  239|Caenorhabditis elegans Egg laying
           defective protein 44,isoform e protein.
          Length = 239

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 13/36 (36%), Positives = 23/36 (63%)
 Frame = -3

Query: 471 MKSVKKSFTVLE*ISNISNFGLLNIIRFLFFISNFP 364
           M +V ++FTVL+ ++N     LL ++ F+F +S  P
Sbjct: 186 MNNVLENFTVLQIVTNSETDELLMVLCFVFEVSQEP 221


>U29537-6|AAO38648.1|  340|Caenorhabditis elegans Egg laying
           defective protein 44,isoform d protein.
          Length = 340

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 13/36 (36%), Positives = 23/36 (63%)
 Frame = -3

Query: 471 MKSVKKSFTVLE*ISNISNFGLLNIIRFLFFISNFP 364
           M +V ++FTVL+ ++N     LL ++ F+F +S  P
Sbjct: 287 MNNVLENFTVLQIVTNSETDELLMVLCFVFEVSQEP 322


>U29537-5|AAO38650.1|  414|Caenorhabditis elegans Egg laying
           defective protein 44,isoform f protein.
          Length = 414

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 13/36 (36%), Positives = 23/36 (63%)
 Frame = -3

Query: 471 MKSVKKSFTVLE*ISNISNFGLLNIIRFLFFISNFP 364
           M +V ++FTVL+ ++N     LL ++ F+F +S  P
Sbjct: 361 MNNVLENFTVLQIVTNSETDELLMVLCFVFEVSQEP 396


>U29537-4|AAO38647.1|  450|Caenorhabditis elegans Egg laying
           defective protein 44,isoform c protein.
          Length = 450

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 13/36 (36%), Positives = 23/36 (63%)
 Frame = -3

Query: 471 MKSVKKSFTVLE*ISNISNFGLLNIIRFLFFISNFP 364
           M +V ++FTVL+ ++N     LL ++ F+F +S  P
Sbjct: 397 MNNVLENFTVLQIVTNSETDELLMVLCFVFEVSQEP 432


>U29537-3|AAO38646.1|  457|Caenorhabditis elegans Egg laying
           defective protein 44,isoform b protein.
          Length = 457

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 13/36 (36%), Positives = 23/36 (63%)
 Frame = -3

Query: 471 MKSVKKSFTVLE*ISNISNFGLLNIIRFLFFISNFP 364
           M +V ++FTVL+ ++N     LL ++ F+F +S  P
Sbjct: 404 MNNVLENFTVLQIVTNSETDELLMVLCFVFEVSQEP 439


>U29537-2|AAK31508.1|  465|Caenorhabditis elegans Egg laying
           defective protein 44,isoform a protein.
          Length = 465

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 13/36 (36%), Positives = 23/36 (63%)
 Frame = -3

Query: 471 MKSVKKSFTVLE*ISNISNFGLLNIIRFLFFISNFP 364
           M +V ++FTVL+ ++N     LL ++ F+F +S  P
Sbjct: 412 MNNVLENFTVLQIVTNSETDELLMVLCFVFEVSQEP 447


>AF283982-1|AAG13397.1|  471|Caenorhabditis elegans transcription
           enhancer factor-1-like protein EGL-44 protein.
          Length = 471

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 13/36 (36%), Positives = 23/36 (63%)
 Frame = -3

Query: 471 MKSVKKSFTVLE*ISNISNFGLLNIIRFLFFISNFP 364
           M +V ++FTVL+ ++N     LL ++ F+F +S  P
Sbjct: 418 MNNVLENFTVLQIVTNSETDELLMVLCFVFEVSQEP 453


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,175,097
Number of Sequences: 27780
Number of extensions: 274457
Number of successful extensions: 690
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 677
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 690
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)