Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0145
         (644 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   1.6  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    22   3.8  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    21   6.6  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = -1

Query: 128 IYHFISSILFKTR*YIYLLNYQVPLFHFLDKVCRYH 21
           IY+F+  + F    Y +   + +   H L  +C YH
Sbjct: 133 IYYFVVPLFFLLCIYYFYCAFIIFTVHLLFLLCIYH 168


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 23  GTYIPYLKNGIVGLDNL 73
           G+Y PY  NG +G ++L
Sbjct: 142 GSYDPYSPNGKIGREDL 158


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
 Frame = -3

Query: 201 SVFT*KTN-SVQIITYFHSTFMCVQYLSFHLIDSF 100
           +++T   N S  ++ Y HS      Y SF+  D F
Sbjct: 102 TIYTTHVNASFDVVVYIHSGAFMTGYGSFYQPDYF 136


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,157
Number of Sequences: 336
Number of extensions: 2888
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16552695
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)