Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0145
         (644 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z72511-2|CAA96656.1|  413|Caenorhabditis elegans Hypothetical pr...    35   0.057
Z73098-8|CAA97334.2|  303|Caenorhabditis elegans Hypothetical pr...    33   0.17 
Z48716-1|CAA88601.1|  482|Caenorhabditis elegans Hypothetical pr...    31   0.70 
U23527-5|AAC46572.2|  915|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z93383-14|CAB07631.2|  279|Caenorhabditis elegans Hypothetical p...    29   2.1  
U55854-2|AAA98011.2| 1427|Caenorhabditis elegans Phospholipase d...    28   4.9  
AB028889-1|BAA97571.1| 1427|Caenorhabditis elegans phospholipase...    28   4.9  
AL032663-6|CAA21766.2|  349|Caenorhabditis elegans Hypothetical ...    28   6.5  

>Z72511-2|CAA96656.1|  413|Caenorhabditis elegans Hypothetical
           protein F55A11.2 protein.
          Length = 413

 Score = 34.7 bits (76), Expect = 0.057
 Identities = 21/56 (37%), Positives = 30/56 (53%)
 Frame = +2

Query: 422 MASRDRTSEFISTVRSLQGRFLNKPTVRDDRKAAVLETYSQFMSMAKVISKNITST 589
           M SRDRTSEF +T +S + +      +R   K  +L    QF  +AK I K ++ T
Sbjct: 107 MPSRDRTSEFRATAKSYEMKAAAN-GIRPQPKHEMLSESVQFNQLAKRIGKELSQT 161


>Z73098-8|CAA97334.2|  303|Caenorhabditis elegans Hypothetical
           protein T21C9.7 protein.
          Length = 303

 Score = 33.1 bits (72), Expect = 0.17
 Identities = 17/48 (35%), Positives = 27/48 (56%)
 Frame = -3

Query: 582 VIFLLITFAILMNWE*VSNTAAFLSSLTVGLFKKRPWRLRTVEMNSLV 439
           +I ++I F ++M W   +N A F+ S T+G F  +     T  +NSLV
Sbjct: 135 LIMIVIIFPMIMTWPIATNNAYFIYSPTLGGFATKTVANSTEVLNSLV 182


>Z48716-1|CAA88601.1|  482|Caenorhabditis elegans Hypothetical
           protein F59B10.2 protein.
          Length = 482

 Score = 31.1 bits (67), Expect = 0.70
 Identities = 25/95 (26%), Positives = 39/95 (41%), Gaps = 2/95 (2%)
 Frame = +2

Query: 245 TERLLETETDSYNKLDKKGVHYGESRPYENSSNSKSTLILKSSDQDVFKFLEEFVFEPVM 424
           TE   E+ +DS +  +        S   E+ S SKS   + SS     K      +    
Sbjct: 212 TESSFESSSDSSSTSESSTSSESSSSASESESESKSESQVSSSKTSTSKASSSKAYGSDF 271

Query: 425 ASRDRTSEFISTVRSLQGRFLNKP--TVRDDRKAA 523
            S   +S   ST+  +  + L+KP  T + D+K A
Sbjct: 272 ESEKSSSSSASTISKVTPKKLDKPQKTKKPDKKRA 306


>U23527-5|AAC46572.2|  915|Caenorhabditis elegans Hypothetical
           protein K09E2.1 protein.
          Length = 915

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 24/94 (25%), Positives = 39/94 (41%), Gaps = 4/94 (4%)
 Frame = +2

Query: 230 RNIGVTERLLETETDSYNKLDKK--GVHYGESRPYENSSNSKST--LILKSSDQDVFKFL 397
           R++  +  + E E  + N+      G   G++ P E SS+S ++  L   +       F 
Sbjct: 479 RDVSNSNSVKEVEEINENEFGNSSFGESDGKTTPLETSSSSSTSQRLTTTTKSSTTSPFA 538

Query: 398 EEFVFEPVMASRDRTSEFISTVRSLQGRFLNKPT 499
             FVF   +  R  +S  +ST  S       KPT
Sbjct: 539 TRFVFSTRVTFRPVSSTVVSTKSSTTSSTTTKPT 572


>Z93383-14|CAB07631.2|  279|Caenorhabditis elegans Hypothetical
           protein F54B8.12 protein.
          Length = 279

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = -1

Query: 362 ESMLIWNLMSSRKAAIPRNEHLSYL 288
           ES+++W L+SS+K   P N  LS L
Sbjct: 255 ESVILWKLLSSKKKVSPNNIRLSNL 279


>U55854-2|AAA98011.2| 1427|Caenorhabditis elegans Phospholipase d
           protein 1 protein.
          Length = 1427

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 18/71 (25%), Positives = 31/71 (43%)
 Frame = +2

Query: 200 EDYNAMLPRRRNIGVTERLLETETDSYNKLDKKGVHYGESRPYENSSNSKSTLILKSSDQ 379
           E++  + PR  N G    +     +  N++D+     G ++  E + N        S D 
Sbjct: 709 EEHEKVTPRNENGGKNGSVKRVAVEEINEVDEPKEVTGRTQETELTDNEDI-----SEDS 763

Query: 380 DVFKFLEEFVF 412
           DV K +EE +F
Sbjct: 764 DVKKIMEETIF 774


>AB028889-1|BAA97571.1| 1427|Caenorhabditis elegans phospholipase D
           protein.
          Length = 1427

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 18/71 (25%), Positives = 31/71 (43%)
 Frame = +2

Query: 200 EDYNAMLPRRRNIGVTERLLETETDSYNKLDKKGVHYGESRPYENSSNSKSTLILKSSDQ 379
           E++  + PR  N G    +     +  N++D+     G ++  E + N        S D 
Sbjct: 709 EEHEKVTPRNENGGKNGSVKRVAVEEINEVDEPKEVTGRTQETELTDNEDI-----SEDS 763

Query: 380 DVFKFLEEFVF 412
           DV K +EE +F
Sbjct: 764 DVKKIMEETIF 774


>AL032663-6|CAA21766.2|  349|Caenorhabditis elegans Hypothetical
           protein Y75B12B.7 protein.
          Length = 349

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 15/62 (24%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
 Frame = -3

Query: 294 LSNLLYESVSVSKSLSVTPIFRLRGSIAL*S--SVFT*KTNSVQIITYFHSTFMCVQYLS 121
           LSN+ + S+ + KSL  +P+F +   I +     + T   N ++ I  F+    C+ + +
Sbjct: 31  LSNIFHFSILIRKSLRSSPVFSMMFVICICDLLQLLTQTQNDIKYILEFNQPDFCLGFDT 90

Query: 120 FH 115
           ++
Sbjct: 91  YY 92


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,647,738
Number of Sequences: 27780
Number of extensions: 266731
Number of successful extensions: 713
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 713
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)