Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0143
(432 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2; Endopterygot... 232 2e-60
UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryo... 200 8e-51
UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryo... 183 2e-45
UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;... 154 9e-37
UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; ... 138 5e-32
UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Scleroti... 131 5e-30
UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL... 120 1e-26
UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; E... 119 2e-26
UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium c... 118 4e-26
UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Ol... 116 2e-25
UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal ... 72 3e-25
UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n... 113 2e-24
UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, pu... 109 2e-23
UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lambli... 107 1e-22
UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974, w... 100 1e-20
UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1; Encephal... 98 6e-20
UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3; Trich... 97 1e-19
UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9; Euryarc... 74 1e-12
UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2; Euryarc... 70 2e-11
UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13; Euryar... 69 3e-11
UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal ... 67 2e-10
UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular org... 66 2e-10
UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2; Cryptomo... 64 2e-09
UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1; L... 62 5e-09
UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9; Archaea... 62 5e-09
UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia b... 61 8e-09
UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3; Archaea... 61 8e-09
UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4; Thermop... 57 2e-07
UniRef50_P60847 Cluster: 50S ribosomal protein L4P; n=1; Nanoarc... 57 2e-07
UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8; Archaea... 55 6e-07
UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1, pu... 46 3e-04
UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarc... 39 0.039
UniRef50_UPI0000F1F89E Cluster: PREDICTED: similar to KIAA2022 p... 36 0.48
UniRef50_UPI0000EBC685 Cluster: PREDICTED: similar to Hrnr prote... 34 1.5
UniRef50_UPI0000DA3D75 Cluster: PREDICTED: similar to ribosomal ... 33 1.9
UniRef50_Q6BJM8 Cluster: Similar to sp|P08640 Saccharomyces cere... 33 3.4
UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2; Thermoprotei... 33 3.4
UniRef50_A0YRY9 Cluster: Putative secreted calcium-binding prote... 32 5.9
UniRef50_Q5AVE5 Cluster: Putative uncharacterized protein; n=1; ... 32 5.9
UniRef50_UPI00005E1AE6 Cluster: putative non-structural protein ... 31 7.8
UniRef50_UPI000069DD10 Cluster: Mastermind-like protein 3 (Mam-3... 31 7.8
UniRef50_Q4TDL2 Cluster: Chromosome undetermined SCAF6181, whole... 31 7.8
UniRef50_A7K8Q1 Cluster: Putative uncharacterized protein z291L;... 31 7.8
UniRef50_Q14NR1 Cluster: Putative uncharacterized protein; n=1; ... 31 7.8
UniRef50_A6NHP9 Cluster: Uncharacterized protein ENSP00000335629... 31 7.8
UniRef50_Q6CCT5 Cluster: Similarity; n=1; Yarrowia lipolytica|Re... 31 7.8
>UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2;
Endopterygota|Rep: Ribosomal protein 23 - Lonomia
obliqua (Moth)
Length = 274
Score = 232 bits (568), Expect = 2e-60
Identities = 106/136 (77%), Positives = 120/136 (88%)
Frame = +1
Query: 25 QAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXX 204
+AWSD+LKVYKSQRLRAGKGKMRNRRR+ RKGPLII+NKDQGLTR+FRNIPGV+
Sbjct: 40 KAWSDVLKVYKSQRLRAGKGKMRNRRRLHRKGPLIIYNKDQGLTRSFRNIPGVDMVNVNK 99
Query: 205 XXXXXXAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLK 384
APGGH+GRF+IWTQSAF RLD +FGSWKTPSK+KKNFNLPQPKMANTDL+RLLK
Sbjct: 100 LNLLHLAPGGHVGRFMIWTQSAFERLDAIFGSWKTPSKEKKNFNLPQPKMANTDLSRLLK 159
Query: 385 SDEIRKVLRAPNKRVI 432
S+EIR+VLRAP KRV+
Sbjct: 160 SEEIRRVLRAPIKRVV 175
>UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96;
Eukaryota|Rep: 60S ribosomal protein L4 - Drosophila
melanogaster (Fruit fly)
Length = 401
Score = 200 bits (489), Expect = 8e-51
Identities = 90/133 (67%), Positives = 108/133 (81%)
Frame = +1
Query: 31 WSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXX 210
W+DI KVYKSQR RAG+G MR+RRRI R+GPL++++KD+GL +AFRNIPG+E
Sbjct: 180 WADIQKVYKSQRFRAGRGTMRDRRRIARRGPLVVYDKDEGLRKAFRNIPGIETINVDKLN 239
Query: 211 XXXXAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSD 390
APGGH+GRFVIWT+SAF RL+ LFG+WK PS KK +NLPQPKMANTDL+RLLKS+
Sbjct: 240 LLKLAPGGHVGRFVIWTESAFARLNDLFGTWKKPSTLKKGYNLPQPKMANTDLSRLLKSE 299
Query: 391 EIRKVLRAPNKRV 429
EIRKVLR P KRV
Sbjct: 300 EIRKVLRDPRKRV 312
>UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70;
Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens
(Human)
Length = 427
Score = 183 bits (445), Expect = 2e-45
Identities = 80/135 (59%), Positives = 103/135 (76%)
Frame = +1
Query: 25 QAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXX 204
+AW+DI KVY SQR+RAGKGKMRNRRRIQR+GP II+N+D G+ +AFRNIPG+
Sbjct: 175 KAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLNVSK 234
Query: 205 XXXXXXAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLK 384
APGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP KM NTDL+R+LK
Sbjct: 235 LNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMINTDLSRILK 294
Query: 385 SDEIRKVLRAPNKRV 429
S EI++ LRAP K++
Sbjct: 295 SPEIQRALRAPRKKI 309
>UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;
Ostreococcus tauri|Rep: Ribosomal protein
RPL1/RPL2/RL4L4 - Ostreococcus tauri
Length = 404
Score = 154 bits (373), Expect = 9e-37
Identities = 71/130 (54%), Positives = 94/130 (72%)
Frame = +1
Query: 28 AWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXX 207
A++DI KV S+ +R+GKGKMRNRR +QR+GPL+++++D G+TRAFRNIPGVE
Sbjct: 179 AYADIEKVKASRNVRSGKGKMRNRRYVQRRGPLVVYSEDNGVTRAFRNIPGVELCSVDRL 238
Query: 208 XXXXXAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKS 387
APGGH+GRF+IWT+SAF +LD +FG+ + S KK + P MA TDLTRL+ S
Sbjct: 239 GLLTLAPGGHVGRFIIWTKSAFEKLDSIFGTSTSKSASKKGWKPPTNIMAQTDLTRLINS 298
Query: 388 DEIRKVLRAP 417
DEI+ L AP
Sbjct: 299 DEIQSALNAP 308
>UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 349
Score = 138 bits (334), Expect = 5e-32
Identities = 67/131 (51%), Positives = 87/131 (66%), Gaps = 3/131 (2%)
Frame = +1
Query: 28 AWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQG---LTRAFRNIPGVEXXXX 198
A +D K S++LRAGKGK+R RR QR+GPL+I+N D+ L +AFRNIPGVE
Sbjct: 155 AGADCEKAKNSRKLRAGKGKLRGRRHKQRRGPLVIYNPDEDGKELVKAFRNIPGVETSSV 214
Query: 199 XXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRL 378
APGGHLGRF++WT SAFG LD ++GS PS KK+F LP M DL+++
Sbjct: 215 YSMNLLQLAPGGHLGRFIVWTSSAFGALDTIYGSTTEPSALKKDFLLPSTMMKQPDLSKI 274
Query: 379 LKSDEIRKVLR 411
+ S +I+KVLR
Sbjct: 275 INSSDIQKVLR 285
>UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2;
Sclerotiniaceae|Rep: 60S ribosomal protein L4 -
Sclerotinia sclerotiorum 1980
Length = 373
Score = 131 bits (317), Expect = 5e-30
Identities = 65/141 (46%), Positives = 90/141 (63%), Gaps = 3/141 (2%)
Frame = +1
Query: 1 AAGIRHEAQAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFN---KDQGLTRAFRN 171
AAG+ A D+ KV S++LRAGKGK+R RR QR+GPL++++ + L RAFRN
Sbjct: 169 AAGLLKTVGALKDVEKVKDSRKLRAGKGKLRGRRHRQRRGPLVVYDGATDGKELVRAFRN 228
Query: 172 IPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPK 351
+PGVE APGGHLGRF+IW+ SAF LD ++G+ PS KK+F LP
Sbjct: 229 LPGVETCDVYSLNLLQLAPGGHLGRFIIWSSSAFKALDNIYGTTTAPSALKKDFLLPSNV 288
Query: 352 MANTDLTRLLKSDEIRKVLRA 414
++ D+ RL+ S E++ V+RA
Sbjct: 289 VSQADIGRLINSSELQSVIRA 309
>UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL4 -
Streblomastix strix
Length = 492
Score = 120 bits (290), Expect = 1e-26
Identities = 57/134 (42%), Positives = 85/134 (63%)
Frame = +1
Query: 25 QAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXX 204
+A D+ +S+R+R G GK RNRR QR+G LI+ ++++GL AFRNI GV+
Sbjct: 175 KASDDVKHSAESKRIRVGSGKARNRRYTQRRGVLIVHDQNEGLANAFRNISGVDISNVXR 234
Query: 205 XXXXXXAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLK 384
APGGHLGRF+IWT+ A+ +LD L+G+ + K + P P + NTDL+R++
Sbjct: 235 LNIRDLAPGGHLGRFIIWTEGAYKKLDKLYGTRFRTALLKNEYKHPTPSVTNTDLSRIIH 294
Query: 385 SDEIRKVLRAPNKR 426
S ++ VL+A K+
Sbjct: 295 SPTVQSVLKARGKQ 308
>UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L4 - Entamoeba histolytica HM-1:IMSS
Length = 431
Score = 119 bits (287), Expect = 2e-26
Identities = 58/130 (44%), Positives = 86/130 (66%), Gaps = 1/130 (0%)
Frame = +1
Query: 28 AWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIF-NKDQGLTRAFRNIPGVEXXXXXX 204
A+SD+LKV S+ +RAG+GKMR R+ +RKGPL+++ N D +AFRNIPGV+
Sbjct: 177 AYSDVLKVIASKTVRAGQGKMRGRKIKERKGPLVVYGNDDLQAVKAFRNIPGVDTCRVEN 236
Query: 205 XXXXXXAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLK 384
APG H+GRF+IWT+SAF +L+ +FG+ K ++ K F + +MA D+ R++
Sbjct: 237 LSVLNLAPGCHIGRFIIWTESAFKKLNTIFGTQKKMAQGKSGFRIAHAQMAVPDMKRVVV 296
Query: 385 SDEIRKVLRA 414
+ E K+LRA
Sbjct: 297 AAEKAKLLRA 306
>UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium
caudatum|Rep: Ribosomal protein L4 - Paramecium caudatum
Length = 252
Score = 118 bits (285), Expect = 4e-26
Identities = 56/136 (41%), Positives = 86/136 (63%), Gaps = 1/136 (0%)
Frame = +1
Query: 28 AWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLII-FNKDQGLTRAFRNIPGVEXXXXXX 204
A+ D+ KV ++ +RAG K R ++ RKGPL++ FN++ L +AFRN+PGVE
Sbjct: 23 AFEDVQKVVSTKTIRAGVSKSRGKKYRVRKGPLVVYFNENAKLLKAFRNVPGVEVVNVTR 82
Query: 205 XXXXXXAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLK 384
APGG LGRFVIWTQSAF LD LFG+++ S K + L +P + N DL R++
Sbjct: 83 LNLLQLAPGGQLGRFVIWTQSAFANLDKLFGTYRYSSILKDGYQLLRPLLTNPDLARIIN 142
Query: 385 SDEIRKVLRAPNKRVI 432
S+++++ ++A + +
Sbjct: 143 SNQVQEKVQAAKQTTV 158
>UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2;
Oligohymenophorea|Rep: Ribosomal protein L4, putative -
Paramecium tetraurelia
Length = 406
Score = 116 bits (280), Expect = 2e-25
Identities = 59/137 (43%), Positives = 86/137 (62%), Gaps = 2/137 (1%)
Frame = +1
Query: 28 AWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLII-FNKDQGLTRAFRNIPGVEXXXXXX 204
A+ D+ KV ++ +RAG K R ++ RKGPL++ FN++ L +AFRN+PGVE
Sbjct: 177 AFEDVQKVVSTKVVRAGISKQRGKKYRVRKGPLVVYFNENAKLLKAFRNVPGVEVVNVTR 236
Query: 205 XXXXXXAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLK 384
APGG LGRFVIWTQSAF LD LFG+++ S K + L +P + N DL R++
Sbjct: 237 LNLLQLAPGGQLGRFVIWTQSAFAHLDKLFGTYRYASVLKDGYQLLRPLLTNPDLARIIN 296
Query: 385 SDEIR-KVLRAPNKRVI 432
S++++ KV A +V+
Sbjct: 297 SNQVQEKVQPAKTTKVL 313
>UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 248
Score = 71.7 bits (168), Expect(2) = 3e-25
Identities = 31/46 (67%), Positives = 39/46 (84%)
Frame = +1
Query: 25 QAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRA 162
+AW+DI KVY SQR+RAGKGKMRNRR IQR+G II+N+D G+ +A
Sbjct: 116 KAWNDIKKVYASQRMRAGKGKMRNRRPIQRRGSCIIYNEDNGIIKA 161
Score = 64.9 bits (151), Expect(2) = 3e-25
Identities = 28/54 (51%), Positives = 38/54 (70%)
Frame = +1
Query: 268 AFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRV 429
AF +LD L+G+W + K N+NLP KM NTDL+R+LK I++ LRAP KR+
Sbjct: 173 AFCKLDDLYGTWPKAASLKSNYNLPMHKMLNTDLSRILKRPGIQRALRAPRKRI 226
>UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n=4;
Cryptosporidium|Rep: 60S ribosomal protein-like,
putative - Cryptosporidium parvum Iowa II
Length = 394
Score = 113 bits (271), Expect = 2e-24
Identities = 51/125 (40%), Positives = 76/125 (60%)
Frame = +1
Query: 37 DILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXX 216
++ ++ S +R GKGKMRNRRR+ GPL+++ +D G+ +A RNI GV+
Sbjct: 182 EMKRIESSIAIRCGKGKMRNRRRVCAVGPLVVYAEDNGIVKAMRNIKGVDTCSVERLNLL 241
Query: 217 XXAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEI 396
APGG GR I+T+ A RL ++GS+ S K + LP+P M N D+TR++ S E+
Sbjct: 242 RLAPGGTFGRLTIFTKGAIKRLQEIYGSYTHGSSSKVGYTLPRPAMTNADITRIINSTEV 301
Query: 397 RKVLR 411
+ VLR
Sbjct: 302 QSVLR 306
>UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L4/L1, putative - Plasmodium chabaudi
Length = 411
Score = 109 bits (262), Expect = 2e-23
Identities = 51/124 (41%), Positives = 77/124 (62%)
Frame = +1
Query: 37 DILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXX 216
++ ++ KS +LRA GKMRNR+ GPLII++ D G+ +AFRNIPGV+
Sbjct: 179 EVNRLIKSXKLRARXGKMRNRKYKISNGPLIIYSXDSGIKKAFRNIPGVDLCNVTKLNLL 238
Query: 217 XXAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEI 396
APGG +GR IW++ AF +LD ++G KKN+ LP+P + N D+ R++ SD++
Sbjct: 239 KLAPGGSIGRLCIWSEDAFKKLDVIYGKTFQKYVTKKNYILPKPIVNNADIYRIINSDQV 298
Query: 397 RKVL 408
+ L
Sbjct: 299 QASL 302
>UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_79_45017_44067 - Giardia lamblia
ATCC 50803
Length = 316
Score = 107 bits (256), Expect = 1e-22
Identities = 51/122 (41%), Positives = 77/122 (63%)
Frame = +1
Query: 37 DILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXX 216
D+ + S+ +RAG+GKMRNRR I RKGPL+I+N + + R FRN+PGV+
Sbjct: 167 DVERCKDSRHIRAGRGKMRNRRYITRKGPLVIYNTED-VARGFRNLPGVDLCHVSSIRLL 225
Query: 217 XXAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEI 396
APG H GR ++WT+SAF LD ++ + K+N+ LP+ + TD+ R+L+SD +
Sbjct: 226 ELAPGSHPGRLILWTKSAFASLDDVYAA-------KQNYTLPRSCITQTDIERILQSDAV 278
Query: 397 RK 402
+K
Sbjct: 279 QK 280
>UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_974, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 386
Score = 100 bits (240), Expect = 1e-20
Identities = 50/110 (45%), Positives = 68/110 (61%), Gaps = 1/110 (0%)
Frame = +1
Query: 1 AAGIRHEAQAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQG-LTRAFRNIP 177
A I + A+ D K S + GKGKMRNRR I RKGPLI++ + L +AFRNIP
Sbjct: 30 AIDILKQFDAYLDTEKAKDSHAIHPGKGKMRNRRYISRKGPLIVYGMEGAKLVKAFRNIP 89
Query: 178 GVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKK 327
GVE APGGHLGRFVIWT+S+F +LD ++ S++ ++++
Sbjct: 90 GVEVANVDRLNLLKLAPGGHLGRFVIWTKSSFEKLDSIYRSFEKKLRRRR 139
>UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L4 -
Encephalitozoon cuniculi
Length = 335
Score = 98.3 bits (234), Expect = 6e-20
Identities = 51/127 (40%), Positives = 72/127 (56%)
Frame = +1
Query: 37 DILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXX 216
++ +V KS+ +R GKGKMRNRR QRKG LI+ + + FRNI GV+
Sbjct: 176 ELKRVEKSRGVRCGKGKMRNRRYTQRKGILIVHGESSEML-GFRNIRGVDQMSIDSLDLL 234
Query: 217 XXAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEI 396
APGG GR +IWT+SAF +LD +FG + ++ F LP + + DL L SD +
Sbjct: 235 ELAPGGVAGRLIIWTESAFEKLDKIFGGVEREAELTPGFKLPNRIVTHDDLEELFYSDAV 294
Query: 397 RKVLRAP 417
+ +L P
Sbjct: 295 QAILDEP 301
>UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 370
Score = 97.1 bits (231), Expect = 1e-19
Identities = 48/126 (38%), Positives = 71/126 (56%)
Frame = +1
Query: 31 WSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXX 210
+ D+ +V R+ KGK R +KGPL+I+N+D+G+ +AFRNIPGVE
Sbjct: 174 YGDVQRVLDGSVHRSSKGKFRRAAYKTKKGPLVIYNEDKGIVKAFRNIPGVETISVKALA 233
Query: 211 XXXXAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSD 390
AP +GR +WT+SAF LD ++ S KK F+LP+ M N D+ ++ SD
Sbjct: 234 LAKLAPAAQVGRLTVWTESAFKALDGIYES-------KKRFSLPRSIMTNADIEAVITSD 286
Query: 391 EIRKVL 408
++ VL
Sbjct: 287 AVQSVL 292
>UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Archaeoglobus fulgidus
Length = 252
Score = 74.1 bits (174), Expect = 1e-12
Identities = 31/80 (38%), Positives = 50/80 (62%)
Frame = +1
Query: 31 WSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXX 210
++D+ + + +R RAG+GKMR RR +++K L++ KD G+ +A +N+PGV+
Sbjct: 164 YADVERAKERKRYRAGRGKMRGRRYVKKKSVLLVVGKDDGVVKAAKNLPGVDAVVVKDLN 223
Query: 211 XXXXAPGGHLGRFVIWTQSA 270
APG H GR +WT+SA
Sbjct: 224 VELLAPGCHPGRLTVWTKSA 243
>UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 259
Score = 69.7 bits (163), Expect = 2e-11
Identities = 32/86 (37%), Positives = 50/86 (58%)
Frame = +1
Query: 37 DILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXX 216
DI++ K +++++GKGK+R R+ KGPL++ D+G++ RN GV+
Sbjct: 169 DIVRAKKGRKIKSGKGKLRGRKYRTPKGPLVVVGNDRGISLGARNHAGVDVVEVNNINAE 228
Query: 217 XXAPGGHLGRFVIWTQSAFGRLDPLF 294
APG H GR I+T+SA +L LF
Sbjct: 229 LLAPGTHAGRLTIYTKSAIEKLGDLF 254
>UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanopyrus kandleri
Length = 260
Score = 69.3 bits (162), Expect = 3e-11
Identities = 32/89 (35%), Positives = 49/89 (55%)
Frame = +1
Query: 31 WSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXX 210
W+D+ + ++R+RAGKGK R RR ++ K LI+ ++D+G+ RN PGV+
Sbjct: 171 WADVERAKSNRRIRAGKGKRRGRRYVKPKSVLIVVDEDEGIKLGARNHPGVDVVEAMHLG 230
Query: 211 XXXXAPGGHLGRFVIWTQSAFGRLDPLFG 297
APG H GR ++T A L+ G
Sbjct: 231 VEHLAPGAHPGRLTVFTPGALEVLEERLG 259
>UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 253
Score = 66.9 bits (156), Expect = 2e-10
Identities = 28/54 (51%), Positives = 40/54 (74%)
Frame = +1
Query: 268 AFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRV 429
AF +LD L+G+W + K N+NLP KM NTDL+R+LKS EI++ L+AP K++
Sbjct: 95 AFCKLDDLYGTWHKAASLKSNYNLPMHKMLNTDLSRILKSPEIQRALQAPRKKI 148
Score = 45.6 bits (103), Expect = 4e-04
Identities = 19/24 (79%), Positives = 22/24 (91%)
Frame = +1
Query: 25 QAWSDILKVYKSQRLRAGKGKMRN 96
+AW+DI KVY SQR+RAGKGKMRN
Sbjct: 38 KAWNDIKKVYASQRMRAGKGKMRN 61
>UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular
organisms|Rep: Ribosomal protein L4 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 304
Score = 66.5 bits (155), Expect = 2e-10
Identities = 31/84 (36%), Positives = 47/84 (55%)
Frame = +1
Query: 34 SDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXX 213
+D+ + + +RAGKG MR R+ K L++ ++ GL +A RNIPGV+
Sbjct: 221 ADLDRARTGRTIRAGKGTMRGRKYRTPKSILLVVSQTNGLAKAARNIPGVDIVVAKDLSA 280
Query: 214 XXXAPGGHLGRFVIWTQSAFGRLD 285
APGG GR +WT++A G L+
Sbjct: 281 EDLAPGGDAGRLTVWTKAAIGALE 304
>UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2;
Cryptomonadaceae|Rep: 60s ribosomal protein L1 -
Guillardia theta (Cryptomonas phi)
Length = 255
Score = 63.7 bits (148), Expect = 2e-09
Identities = 31/86 (36%), Positives = 49/86 (56%)
Frame = +1
Query: 34 SDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXX 213
+ I++ ++L++GKGKMRNRR + GPL++F + ++ RNI ++
Sbjct: 172 NSIVRNKLKRKLKSGKGKMRNRRFKKPTGPLLVFKNN---LKSLRNIANIDCMKISALNL 228
Query: 214 XXXAPGGHLGRFVIWTQSAFGRLDPL 291
APGGHLGR IW+ AF L+ +
Sbjct: 229 TKLAPGGHLGRLCIWSSKAFQMLNTI 254
>UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1;
Leishmania major strain Friedlin|Rep: Ribosomal protein
L1a, putative - Leishmania major strain Friedlin
Length = 432
Score = 62.1 bits (144), Expect = 5e-09
Identities = 30/69 (43%), Positives = 44/69 (63%)
Frame = +1
Query: 28 AWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXX 207
A D+ +V S+ +RAG+GKMRNRR + R+GP+++ ++G TRAFRNI G++
Sbjct: 175 AIDDVNRVNDSREIRAGRGKMRNRRYVARRGPMLVMPNNKG-TRAFRNIFGLDLANVSAL 233
Query: 208 XXXXXAPGG 234
APGG
Sbjct: 234 TLLHLAPGG 242
>UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9;
Archaea|Rep: 50S ribosomal protein L4P - Pyrobaculum
aerophilum
Length = 283
Score = 62.1 bits (144), Expect = 5e-09
Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Frame = +1
Query: 31 WSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNK-DQGLTRAFRNIPGVEXXXXXXX 207
W D+ + + ++RAGKGKMR RR + K L++ + + L A RN PGV+
Sbjct: 194 WPDVERAAEGVKIRAGKGKMRGRRYKEPKSVLVVVSDLNAPLIAAVRNFPGVDVVAVNNL 253
Query: 208 XXXXXAPGGHLGRFVIWTQSAFGRLDPLF 294
APGG GR +WT A +L LF
Sbjct: 254 NILVLAPGGVPGRLTLWTAPAVEKLRGLF 282
>UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia
bovis|Rep: Ribosomal protein RPL4A - Babesia bovis
Length = 360
Score = 61.3 bits (142), Expect = 8e-09
Identities = 42/123 (34%), Positives = 60/123 (48%), Gaps = 2/123 (1%)
Frame = +1
Query: 61 QRLRAGKGKMRNRRRIQRKGPLIIFNKD--QGLTRAFRNIPGVEXXXXXXXXXXXXAPGG 234
+R+ G+ R+ R+ + GPLII +G RAFRNIPGVE AP G
Sbjct: 180 KRIDKVTGRARDGRKKRPVGPLIILRATAVEG-KRAFRNIPGVEVACVERLNLLKLAPAG 238
Query: 235 HLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRA 414
LGR +W++SAF LD +P + N DL+ L++S ++ LRA
Sbjct: 239 ALGRLCVWSKSAFEALDDYIKM------------MPTKLLKNADLSALIESTPVQAALRA 286
Query: 415 PNK 423
P +
Sbjct: 287 PRE 289
>UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3;
Archaea|Rep: 50S ribosomal protein L4P - Sulfolobus
solfataricus
Length = 267
Score = 61.3 bits (142), Expect = 8e-09
Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Frame = +1
Query: 31 WSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLII-FNKDQGLTRAFRNIPGVEXXXXXXX 207
+ D+ +V + R+RAGKGKMR R+ + GPLII + + + +A RN+ GV+
Sbjct: 173 YDDVERVKERIRIRAGKGKMRGRKYKEPIGPLIIVHDSNSPIIKAARNLAGVDVVNAKDV 232
Query: 208 XXXXXAPGGHLGRFVIWTQSAFGRLD 285
APG H GR I+T+S+ LD
Sbjct: 233 SVIHLAPGAHPGRLTIYTESSIKILD 258
>UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L4P -
Thermoplasma acidophilum
Length = 255
Score = 56.8 bits (131), Expect = 2e-07
Identities = 31/84 (36%), Positives = 45/84 (53%)
Frame = +1
Query: 31 WSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXX 210
+ DI + + + +RAG+GKMR RR Q K LI+ + +AFR++PGV+
Sbjct: 168 YEDIERSREGKHIRAGRGKMRGRRYKQPKSVLIVARNSSAM-KAFRSLPGVDIASPNSLS 226
Query: 211 XXXXAPGGHLGRFVIWTQSAFGRL 282
APGG GR I+T+ A L
Sbjct: 227 IRKLAPGGVGGRLTIFTEGAIESL 250
>UniRef50_P60847 Cluster: 50S ribosomal protein L4P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L4P -
Nanoarchaeum equitans
Length = 268
Score = 56.8 bits (131), Expect = 2e-07
Identities = 33/83 (39%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Frame = +1
Query: 37 DILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNK-DQGLTRAFRNIPGVEXXXXXXXXX 213
++ +VY+ +R RAGKGK R R I+RKGPLI+ N ++ L +A NIPG++
Sbjct: 180 ELERVYEIKR-RAGKGKRRGRAYIERKGPLIVVNDYNEQLFKAVDNIPGLDIEEVPNLNV 238
Query: 214 XXXAPGGHLGRFVIWTQSAFGRL 282
APG GR +I ++ A L
Sbjct: 239 ELLAPGAKPGRLLIISKDALETL 261
>UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8;
Archaea|Rep: 50S ribosomal protein L4P - Aeropyrum
pernix
Length = 272
Score = 55.2 bits (127), Expect = 6e-07
Identities = 32/99 (32%), Positives = 44/99 (44%), Gaps = 1/99 (1%)
Frame = +1
Query: 1 AAGIRHEAQAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQG-LTRAFRNIP 177
A + + D+L+ + +R AGKGKMR RR K L + + L A + +P
Sbjct: 169 ARSLLESVGVYEDVLRAKEGKRYNAGKGKMRGRRYKVPKSVLFVLEDPRSPLALAVKGMP 228
Query: 178 GVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLF 294
GV+ APGGH GR I+T A L F
Sbjct: 229 GVDVVTPTLLSVLHLAPGGHPGRLTIYTTEALKLLSRRF 267
>UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=2; Theileria|Rep: 60S ribosomal subunit
protein L4/L1, putative - Theileria annulata
Length = 426
Score = 46.4 bits (105), Expect = 3e-04
Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Frame = +1
Query: 91 RNRRRIQRK--GPLIIFNKD--QGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLGRFVIW 258
R +R+ +++ GPL++ +G RAFRNIPGV+ AP G LGR VI+
Sbjct: 187 RTKRKGKKRPVGPLVVMRSTAVEG-KRAFRNIPGVDVMSVEHMNLLKLAPAGTLGRLVIF 245
Query: 259 TQSAFGRLD 285
++SAF LD
Sbjct: 246 SKSAFELLD 254
>UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarcula
marismortui|Rep: 50S ribosomal protein L4P - Haloarcula
marismortui (Halobacterium marismortui)
Length = 246
Score = 39.1 bits (87), Expect = 0.039
Identities = 21/73 (28%), Positives = 36/73 (49%)
Frame = +1
Query: 64 RLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLG 243
+++AG+G R R+ +R ++ D+ T A RN+ G + APGG G
Sbjct: 173 KIKAGQGSARGRK-YRRPASILFVTSDEPSTAA-RNLAGADVATASEVNTEDLAPGGAPG 230
Query: 244 RFVIWTQSAFGRL 282
R ++T+SA +
Sbjct: 231 RLTVFTESALAEV 243
>UniRef50_UPI0000F1F89E Cluster: PREDICTED: similar to KIAA2022
protein; n=2; Danio rerio|Rep: PREDICTED: similar to
KIAA2022 protein - Danio rerio
Length = 1230
Score = 35.5 bits (78), Expect = 0.48
Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 9/97 (9%)
Frame = -1
Query: 270 CGLSPDDETSKMTSR------SQLQEVQLVNIQELHTGDVAESASQTLILVEDYEGSLTL 109
C LSP E+ S +Q+ + QL + Q+ T DVAESA Q ++G + L
Sbjct: 691 CVLSPPSESELQQSPQNCPTLTQMWQAQLHSNQQFTTADVAESAIQP----NSFDGEMAL 746
Query: 108 ---DTTTVAHFTLTSTKTLRLVHLKDIRPCLSLVPNS 7
++ TV+ F+ S ++ R+++ K+ P L P++
Sbjct: 747 PMSESLTVSGFSQLSLESNRMLYEKNYMPEQPLPPDA 783
>UniRef50_UPI0000EBC685 Cluster: PREDICTED: similar to Hrnr protein;
n=1; Bos taurus|Rep: PREDICTED: similar to Hrnr protein
- Bos taurus
Length = 1606
Score = 33.9 bits (74), Expect = 1.5
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2
Query: 251 SSGLSPHSAGLTPYSGHGRHHQNKRRTSTCPNRR 352
SSG H +GL+ S +G+H R++S+C +R
Sbjct: 566 SSGFGQHGSGLSQSSSYGQHGSTSRQSSSCGQQR 599
>UniRef50_UPI0000DA3D75 Cluster: PREDICTED: similar to ribosomal
protein L4; n=3; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L4 - Rattus norvegicus
Length = 140
Score = 33.5 bits (73), Expect = 1.9
Identities = 14/27 (51%), Positives = 21/27 (77%)
Frame = +1
Query: 349 KMANTDLTRLLKSDEIRKVLRAPNKRV 429
KM N+DL+R+LK EI++ L+AP K +
Sbjct: 3 KMMNSDLSRILKIPEIQRALQAPCKEI 29
>UniRef50_Q6BJM8 Cluster: Similar to sp|P08640 Saccharomyces
cerevisiae YIR019c STA1 extracellular alpha-1; n=1;
Debaryomyces hansenii|Rep: Similar to sp|P08640
Saccharomyces cerevisiae YIR019c STA1 extracellular
alpha-1 - Debaryomyces hansenii (Yeast) (Torulaspora
hansenii)
Length = 561
Score = 32.7 bits (71), Expect = 3.4
Identities = 21/79 (26%), Positives = 40/79 (50%)
Frame = -1
Query: 252 DETSKMTSRSQLQEVQLVNIQELHTGDVAESASQTLILVEDYEGSLTLDTTTVAHFTLTS 73
+ + +T+ QL V+ ++QE T +++ S+T ED+ GS++ +T T+T
Sbjct: 429 EASETITTSPQLSSVEYTSVQE--TSISSDTESET----EDHIGSVSTSSTNTKDITITL 482
Query: 72 TKTLRLVHLKDIRPCLSLV 16
TK + D + C + V
Sbjct: 483 TKEITSTSCADQQHCSTTV 501
>UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2;
Thermoprotei|Rep: Ribosomal protein L4 - Cenarchaeum
symbiosum
Length = 271
Score = 32.7 bits (71), Expect = 3.4
Identities = 19/76 (25%), Positives = 31/76 (40%)
Frame = +1
Query: 55 KSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGG 234
+ ++ R GK +R R + K L + D + RA PGV APG
Sbjct: 179 EGRKPRTGKSALRGRPKKIGKSILFVVGADGPVIRAVGGFPGVTARPARDLSVLDLAPGA 238
Query: 235 HLGRFVIWTQSAFGRL 282
R +++++A L
Sbjct: 239 EPARLTVYSKAAIESL 254
>UniRef50_A0YRY9 Cluster: Putative secreted calcium-binding protein;
n=1; Lyngbya sp. PCC 8106|Rep: Putative secreted
calcium-binding protein - Lyngbya sp. PCC 8106
Length = 256
Score = 31.9 bits (69), Expect = 5.9
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = -1
Query: 261 SPDDETSKMTSRSQLQEVQLVNIQELHTGDVAESASQTLILVEDYEGS 118
+P ++T ++ + +LVN Q+L T + S T I+ ED++GS
Sbjct: 188 NPQEDTIQLVGN--IDTYELVNTQDLQTNNSVSLPSGTAIIYEDFDGS 233
>UniRef50_Q5AVE5 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 366
Score = 31.9 bits (69), Expect = 5.9
Identities = 23/81 (28%), Positives = 32/81 (39%)
Frame = -1
Query: 297 PE*GVKPAECGLSPDDETSKMTSRSQLQEVQLVNIQELHTGDVAESASQTLILVEDYEGS 118
P V+P TS TS S E L + TGDV ++S T L+E
Sbjct: 50 PSSTVRPTSSAPISSTPTSTSTSTST-SETSLTTLASTSTGDVTVTSSSTAGLIETIPAV 108
Query: 117 LTLDTTTVAHFTLTSTKTLRL 55
+ T+ + TST L +
Sbjct: 109 VVNAATSTTSESATSTSALSI 129
>UniRef50_UPI00005E1AE6 Cluster: putative non-structural protein
NS4/5; n=1; Aquareovirus A|Rep: putative non-structural
protein NS4/5 - Aquareovirus A
Length = 452
Score = 31.5 bits (68), Expect = 7.8
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 277 RLDPLFGSWKTPSKQKKNFNLPQPKMANTDLT 372
RLD L SW TP ++ +P+P++ T L+
Sbjct: 72 RLDVLGDSWSTPKHSLRSHRVPEPRVRRTSLS 103
>UniRef50_UPI000069DD10 Cluster: Mastermind-like protein 3 (Mam-3).;
n=3; Tetrapoda|Rep: Mastermind-like protein 3 (Mam-3). -
Xenopus tropicalis
Length = 1046
Score = 31.5 bits (68), Expect = 7.8
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +2
Query: 236 ILDVSSSGLSPHSAGLTPYSGHGRHHQNKRRTST 337
+L + GL S G P S HG+H N R ST
Sbjct: 574 LLIMKQKGLMNQSMGYPPLSAHGQHENNNYRMST 607
>UniRef50_Q4TDL2 Cluster: Chromosome undetermined SCAF6181, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF6181,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 383
Score = 31.5 bits (68), Expect = 7.8
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 269 HSAGLTPYSGHGRHHQNKRRTSTCPNR 349
H G T + +HHQ+ ++TS CP R
Sbjct: 313 HRLGPTSFHSSAQHHQSAQKTSKCPTR 339
>UniRef50_A7K8Q1 Cluster: Putative uncharacterized protein z291L;
n=1; Chlorella virus ATCV-1|Rep: Putative
uncharacterized protein z291L - Chlorella virus ATCV-1
Length = 195
Score = 31.5 bits (68), Expect = 7.8
Identities = 16/37 (43%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Frame = +2
Query: 248 SSSGLSPHSAGLTPYSGHGRHHQ-NKRRTSTCPNRRW 355
SS G SPH P S H H R T CP+R W
Sbjct: 154 SSIGYSPHEHPSLPESAHRSHGSVYARATEDCPSRLW 190
>UniRef50_Q14NR1 Cluster: Putative uncharacterized protein; n=1;
Spiroplasma citri|Rep: Putative uncharacterized protein
- Spiroplasma citri
Length = 291
Score = 31.5 bits (68), Expect = 7.8
Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Frame = -1
Query: 234 TSRSQLQEVQLVNIQELHT--GDVAESASQTLILVEDYEGSL 115
TSR Q+ ++ L + Q L+T ++A S T+ LV DY GSL
Sbjct: 47 TSRLQVSKITLNSNQNLNTIKNNLASVLSNTINLVSDYSGSL 88
>UniRef50_A6NHP9 Cluster: Uncharacterized protein ENSP00000335629;
n=1; Homo sapiens|Rep: Uncharacterized protein
ENSP00000335629 - Homo sapiens (Human)
Length = 245
Score = 31.5 bits (68), Expect = 7.8
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 3/32 (9%)
Frame = +2
Query: 263 SPHSAGLT---PYSGHGRHHQNKRRTSTCPNR 349
SPH+ G+T PYSGH HH + P+R
Sbjct: 194 SPHAVGITTVTPYSGHHHHHPMQSAPLLSPHR 225
>UniRef50_Q6CCT5 Cluster: Similarity; n=1; Yarrowia lipolytica|Rep:
Similarity - Yarrowia lipolytica (Candida lipolytica)
Length = 572
Score = 31.5 bits (68), Expect = 7.8
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -1
Query: 114 TLDTTTVAHFTLTSTKTLRLVHLKDIRPCLSLVPNSCS 1
T+ TV TL L+L HL D+ CL+L +SC+
Sbjct: 3 TIAIVTVPRMTLPVELCLQLFHLCDLESCLALSESSCT 40
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 424,417,797
Number of Sequences: 1657284
Number of extensions: 7985628
Number of successful extensions: 22490
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 21742
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22461
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 21075479950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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