Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0143
         (432 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein p...    27   0.38 
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   2.0  
DQ437578-1|ABD96048.1|  234|Anopheles gambiae short neuropeptide...    23   4.6  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    23   6.1  

>AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein
           protein.
          Length = 400

 Score = 26.6 bits (56), Expect = 0.38
 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 6/36 (16%)
 Frame = +1

Query: 295 GSWKTPSKQKKNFNLPQP------KMANTDLTRLLK 384
           G  K P K+KK  +LP+P      K  N DL ++LK
Sbjct: 153 GQSKQPKKKKKKRSLPKPEAVVIEKCENIDLAKVLK 188


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 24.2 bits (50), Expect = 2.0
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = -2

Query: 296 PNKGSSLPNAD*VQMTKRPR*PPGA 222
           P  G   P    V M  RP+ PPGA
Sbjct: 212 PRPGGMYPQPPGVPMPMRPQMPPGA 236


>DQ437578-1|ABD96048.1|  234|Anopheles gambiae short neuropeptide F
           prepropeptide protein.
          Length = 234

 Score = 23.0 bits (47), Expect = 4.6
 Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 10/63 (15%)
 Frame = +1

Query: 271 FGRLDPLFGSWKTPSKQKKNFNLPQPKM------ANT--DLTRLLKSDEI--RKVLRAPN 420
           FGR DPL+ S+   +  ++NF    P        +N   +L    + D++  +K +RAP 
Sbjct: 101 FGRNDPLWTSFNENALLEENFEKRAPSQRLRWGRSNLFGNLVNQFQQDDVMQQKTIRAPQ 160

Query: 421 KRV 429
            R+
Sbjct: 161 LRL 163


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1173

 Score = 22.6 bits (46), Expect = 6.1
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = +1

Query: 223  APGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQ 345
            A G     +V W      RL P  G+W++    + NF+L Q
Sbjct: 901  AAGHQASGYVRWAH----RLIPDIGAWQSRKHGEVNFHLSQ 937


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 436,668
Number of Sequences: 2352
Number of extensions: 8072
Number of successful extensions: 20
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 35717724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)