Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0142
         (584 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    22   4.4  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   5.8  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    21   7.7  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   7.7  

>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -2

Query: 460 TLKRIIYRNLKNY 422
           TLK  +YRN+KN+
Sbjct: 566 TLKIGVYRNIKNF 578


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = +2

Query: 422 IILEVTVNNSFQCIYLSKFICC 487
           ++ ++   +SF+CI+LS    C
Sbjct: 73  VVEKILTQSSFECIHLSVLHKC 94


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +3

Query: 99  PTRADSQEVLPPVFYNNIISVNTQMFLT*TK 191
           P   + +++L P F+ NI+    Q+F   TK
Sbjct: 121 PKWQNRRKILTPAFHFNILQEFIQIFNEETK 151


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +3

Query: 99  PTRADSQEVLPPVFYNNIISVNTQMFLT*TK 191
           P   + +++L P F+ NI+    Q+F   TK
Sbjct: 121 PKWQNRRKILTPAFHFNILQEFIQIFNEETK 151


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,595
Number of Sequences: 336
Number of extensions: 2750
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14621740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)