Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0138
(590 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z95123-2|CAB08356.1| 339|Caenorhabditis elegans Hypothetical pr... 182 2e-46
AF260244-1|AAF97550.1| 339|Caenorhabditis elegans stearoyl-CoA ... 182 2e-46
AF260243-1|AAF97549.1| 338|Caenorhabditis elegans stearoyl-CoA ... 179 2e-45
AF022972-8|AAC48239.1| 338|Caenorhabditis elegans Fatty acid de... 179 2e-45
Z82073-6|CAB04924.1| 333|Caenorhabditis elegans Hypothetical pr... 163 1e-40
AF260242-1|AAF97548.1| 333|Caenorhabditis elegans palmitoyl-CoA... 163 1e-40
AL021503-3|CAA16423.1| 324|Caenorhabditis elegans Hypothetical ... 32 0.27
AL110479-9|CAB60315.3| 583|Caenorhabditis elegans Hypothetical ... 32 0.35
AF016446-7|AAC24174.1| 330|Caenorhabditis elegans Serpentine re... 31 0.81
Z35603-1|CAA84673.1| 1017|Caenorhabditis elegans Hypothetical pr... 28 4.3
X75564-1|CAA53244.1| 1017|Caenorhabditis elegans myosin IA protein. 28 4.3
AC024882-1|AAF60940.1| 369|Caenorhabditis elegans Hypothetical ... 28 4.3
Z49072-5|CAA88885.2| 1109|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z49067-4|CAA88853.2| 1109|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z93380-3|CAB07600.1| 339|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z81587-2|CAB04702.2| 339|Caenorhabditis elegans Hypothetical pr... 27 10.0
Z69646-8|CAA93477.3| 896|Caenorhabditis elegans Hypothetical pr... 27 10.0
Z50794-7|CAA90661.3| 896|Caenorhabditis elegans Hypothetical pr... 27 10.0
>Z95123-2|CAB08356.1| 339|Caenorhabditis elegans Hypothetical
protein VZK822L.1 protein.
Length = 339
Score = 182 bits (443), Expect = 2e-46
Identities = 87/158 (55%), Positives = 102/158 (64%), Gaps = 4/158 (2%)
Frame = +3
Query: 126 ETEYLKDNHVDYEKLIAPQAS----PIKHKIVVMNVIRFSYLHIAGLYGLYLCFTSAKLA 293
ET+YL VD ++I Q P K +IV NV F+ LH A GLY AK
Sbjct: 20 ETQYLA---VDPNEIIQLQEESKKIPYKMEIVWRNVALFAALHFAAAIGLYQLIFEAKWQ 76
Query: 294 TSVFAIVLFFLGNFGITAGAHRLWSHNGYKVKLPLEILLMVFNSIAFQNTIFTWVRDHRL 473
T +F +L+ G FGITAGAHRLWSH YK P+ I LM+ N+IA QN + W RDHR
Sbjct: 77 TVIFTFLLYVFGGFGITAGAHRLWSHKSYKATTPMRIFLMILNNIALQNDVIEWARDHRC 136
Query: 474 HHKYTDTDADPHNATRGFFFSHIGWLLVRKHPMVKIAG 587
HHK+TDTDADPHN TRGFFF+H+GWLLVRKHP VK G
Sbjct: 137 HHKWTDTDADPHNTTRGFFFAHMGWLLVRKHPQVKEQG 174
>AF260244-1|AAF97550.1| 339|Caenorhabditis elegans stearoyl-CoA
desaturase FAT-6 protein.
Length = 339
Score = 182 bits (443), Expect = 2e-46
Identities = 87/158 (55%), Positives = 102/158 (64%), Gaps = 4/158 (2%)
Frame = +3
Query: 126 ETEYLKDNHVDYEKLIAPQAS----PIKHKIVVMNVIRFSYLHIAGLYGLYLCFTSAKLA 293
ET+YL VD ++I Q P K +IV NV F+ LH A GLY AK
Sbjct: 20 ETQYLA---VDPNEIIQLQEESKKIPYKMEIVWRNVALFAALHFAAAIGLYQLIFEAKWQ 76
Query: 294 TSVFAIVLFFLGNFGITAGAHRLWSHNGYKVKLPLEILLMVFNSIAFQNTIFTWVRDHRL 473
T +F +L+ G FGITAGAHRLWSH YK P+ I LM+ N+IA QN + W RDHR
Sbjct: 77 TVIFTFLLYVFGGFGITAGAHRLWSHKSYKATTPMRIFLMILNNIALQNDVIEWARDHRC 136
Query: 474 HHKYTDTDADPHNATRGFFFSHIGWLLVRKHPMVKIAG 587
HHK+TDTDADPHN TRGFFF+H+GWLLVRKHP VK G
Sbjct: 137 HHKWTDTDADPHNTTRGFFFAHMGWLLVRKHPQVKEQG 174
>AF260243-1|AAF97549.1| 338|Caenorhabditis elegans stearoyl-CoA
desaturase FAT-7 protein.
Length = 338
Score = 179 bits (435), Expect = 2e-45
Identities = 80/133 (60%), Positives = 92/133 (69%)
Frame = +3
Query: 189 PIKHKIVVMNVIRFSYLHIAGLYGLYLCFTSAKLATSVFAIVLFFLGNFGITAGAHRLWS 368
P K +IV NV F+ LH+A GLY AK T+VF+ L+ FGITAGAHRLWS
Sbjct: 41 PYKMEIVWRNVALFAALHVAAAIGLYELVFHAKWQTAVFSFALYVFSGFGITAGAHRLWS 100
Query: 369 HNGYKVKLPLEILLMVFNSIAFQNTIFTWVRDHRLHHKYTDTDADPHNATRGFFFSHIGW 548
H YK P+ I LM+ N+IA QN I W RDHR HHK+TDTDADPHN TRGFFF+H+GW
Sbjct: 101 HKSYKATTPMRIFLMLLNNIALQNDIIEWARDHRCHHKWTDTDADPHNTTRGFFFTHMGW 160
Query: 549 LLVRKHPMVKIAG 587
LLVRKHP VK G
Sbjct: 161 LLVRKHPQVKEHG 173
>AF022972-8|AAC48239.1| 338|Caenorhabditis elegans Fatty acid
desaturase protein 7 protein.
Length = 338
Score = 179 bits (435), Expect = 2e-45
Identities = 80/133 (60%), Positives = 92/133 (69%)
Frame = +3
Query: 189 PIKHKIVVMNVIRFSYLHIAGLYGLYLCFTSAKLATSVFAIVLFFLGNFGITAGAHRLWS 368
P K +IV NV F+ LH+A GLY AK T+VF+ L+ FGITAGAHRLWS
Sbjct: 41 PYKMEIVWRNVALFAALHVAAAIGLYELVFHAKWQTAVFSFALYVFSGFGITAGAHRLWS 100
Query: 369 HNGYKVKLPLEILLMVFNSIAFQNTIFTWVRDHRLHHKYTDTDADPHNATRGFFFSHIGW 548
H YK P+ I LM+ N+IA QN I W RDHR HHK+TDTDADPHN TRGFFF+H+GW
Sbjct: 101 HKSYKATTPMRIFLMLLNNIALQNDIIEWARDHRCHHKWTDTDADPHNTTRGFFFTHMGW 160
Query: 549 LLVRKHPMVKIAG 587
LLVRKHP VK G
Sbjct: 161 LLVRKHPQVKEHG 173
>Z82073-6|CAB04924.1| 333|Caenorhabditis elegans Hypothetical
protein W06D12.3 protein.
Length = 333
Score = 163 bits (395), Expect = 1e-40
Identities = 74/132 (56%), Positives = 88/132 (66%)
Frame = +3
Query: 192 IKHKIVVMNVIRFSYLHIAGLYGLYLCFTSAKLATSVFAIVLFFLGNFGITAGAHRLWSH 371
IK +IV NV F LHI L GLY AK AT + +L LG+ G+T GAHRLW+H
Sbjct: 34 IKMEIVWKNVALFVALHIGALVGLYQLVFQAKWATVGWVFLLHTLGSMGVTGGAHRLWAH 93
Query: 372 NGYKVKLPLEILLMVFNSIAFQNTIFTWVRDHRLHHKYTDTDADPHNATRGFFFSHIGWL 551
YK L + LM+ NSIAFQN I W RDHR HHK+TDTDADPH+ RG FF+H+GWL
Sbjct: 94 RAYKATLSWRVFLMLINSIAFQNDIIDWARDHRCHHKWTDTDADPHSTNRGMFFAHMGWL 153
Query: 552 LVRKHPMVKIAG 587
LV+KH +KI G
Sbjct: 154 LVKKHDQLKIQG 165
>AF260242-1|AAF97548.1| 333|Caenorhabditis elegans palmitoyl-CoA
fatty acid desaturaseFAT-5 protein.
Length = 333
Score = 163 bits (395), Expect = 1e-40
Identities = 74/132 (56%), Positives = 88/132 (66%)
Frame = +3
Query: 192 IKHKIVVMNVIRFSYLHIAGLYGLYLCFTSAKLATSVFAIVLFFLGNFGITAGAHRLWSH 371
IK +IV NV F LHI L GLY AK AT + +L LG+ G+T GAHRLW+H
Sbjct: 34 IKMEIVWKNVALFVALHIGALVGLYQLVFQAKWATVGWVFLLHTLGSMGVTGGAHRLWAH 93
Query: 372 NGYKVKLPLEILLMVFNSIAFQNTIFTWVRDHRLHHKYTDTDADPHNATRGFFFSHIGWL 551
YK L + LM+ NSIAFQN I W RDHR HHK+TDTDADPH+ RG FF+H+GWL
Sbjct: 94 RAYKATLSWRVFLMLINSIAFQNDIIDWARDHRCHHKWTDTDADPHSTNRGMFFAHMGWL 153
Query: 552 LVRKHPMVKIAG 587
LV+KH +KI G
Sbjct: 154 LVKKHDQLKIQG 165
>AL021503-3|CAA16423.1| 324|Caenorhabditis elegans Hypothetical
protein Y68A4A.6 protein.
Length = 324
Score = 32.3 bits (70), Expect = 0.27
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = -1
Query: 236 IAKTYHVHHYNFVFDGRGLGCNEFFIINMIILEVFCFICFIH*IRRHFSNL-DFNFIY 66
IAKTY F+ G GL F+I+ M + E+F F+ F+ IR F L F +Y
Sbjct: 80 IAKTYDFKEKFFIVIGFGLFFLSFYILRM-VQELFHFLLFLLAIRNTFKYLFPFRTLY 136
>AL110479-9|CAB60315.3| 583|Caenorhabditis elegans Hypothetical
protein Y105C5B.11 protein.
Length = 583
Score = 31.9 bits (69), Expect = 0.35
Identities = 19/66 (28%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Frame = +3
Query: 132 EYLKDNHVDY-EKLIAPQASPIKHKIVVMNVIRFSYLHIAGLYGLYLCFTSAKLATSVFA 308
EY + + V Y EKL+AP+ + + + +M R YLH+ Y C+++ +++ +VF+
Sbjct: 58 EYKRKDVVLYREKLLAPEVTNLVSREQMMMHPRDQYLHVLSPY----CYSAIEVSHAVFS 113
Query: 309 IVLFFL 326
I + +
Sbjct: 114 IFAYIV 119
>AF016446-7|AAC24174.1| 330|Caenorhabditis elegans Serpentine
receptor, class h protein21 protein.
Length = 330
Score = 30.7 bits (66), Expect = 0.81
Identities = 10/36 (27%), Positives = 23/36 (63%)
Frame = +1
Query: 232 AIYILLVYMDFISVSPQQNWLHRFLLLCYSSLGTLV 339
++Y+L + D++S+ W+ +F++LC + G +V
Sbjct: 182 SVYLLSAFADYVSIIVLSFWIVQFVVLCVAIPGAIV 217
>Z35603-1|CAA84673.1| 1017|Caenorhabditis elegans Hypothetical
protein T02C12.1 protein.
Length = 1017
Score = 28.3 bits (60), Expect = 4.3
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +3
Query: 159 YEKLIAPQASPIKHKIVVMNVIRFSYLHIAGLYGLY 266
YE+L + S + I V N R+S H+ G+ +Y
Sbjct: 355 YERLFSWMVSKVNEAISVQNSSRYSKSHVIGVLDIY 390
>X75564-1|CAA53244.1| 1017|Caenorhabditis elegans myosin IA protein.
Length = 1017
Score = 28.3 bits (60), Expect = 4.3
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +3
Query: 159 YEKLIAPQASPIKHKIVVMNVIRFSYLHIAGLYGLY 266
YE+L + S + I V N R+S H+ G+ +Y
Sbjct: 355 YERLFSWMVSKVNEAISVQNSSRYSKSHVIGVLDIY 390
>AC024882-1|AAF60940.1| 369|Caenorhabditis elegans Hypothetical
protein Y9C9A.17 protein.
Length = 369
Score = 28.3 bits (60), Expect = 4.3
Identities = 15/46 (32%), Positives = 28/46 (60%)
Frame = +1
Query: 223 YVLAIYILLVYMDFISVSPQQNWLHRFLLLCYSSLGTLVLQLELIV 360
+ LA ++ +Y+ I+ SPQ+ +++LL +S L + LEL+V
Sbjct: 20 FSLATNLIAIYL-VITKSPQKIGSYKYLLCSFSILSMIFALLELLV 64
>Z49072-5|CAA88885.2| 1109|Caenorhabditis elegans Hypothetical
protein C44F1.5 protein.
Length = 1109
Score = 27.9 bits (59), Expect = 5.7
Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +3
Query: 201 KIVVMNVIRFSYLHI-AGLYGLYLCFTSAKLATSVF 305
K++V ++ +HI G+YLC T+ +LA + F
Sbjct: 5 KVIVAKLLAIIVVHIWTNFTGIYLCSTADRLARNAF 40
>Z49067-4|CAA88853.2| 1109|Caenorhabditis elegans Hypothetical
protein C44F1.5 protein.
Length = 1109
Score = 27.9 bits (59), Expect = 5.7
Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +3
Query: 201 KIVVMNVIRFSYLHI-AGLYGLYLCFTSAKLATSVF 305
K++V ++ +HI G+YLC T+ +LA + F
Sbjct: 5 KVIVAKLLAIIVVHIWTNFTGIYLCSTADRLARNAF 40
>Z93380-3|CAB07600.1| 339|Caenorhabditis elegans Hypothetical
protein F28C12.4 protein.
Length = 339
Score = 27.5 bits (58), Expect = 7.5
Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +3
Query: 258 GLYLCFTSAKLATS-VFAIVLFFLGNFGITAGAHRLWSHNGYKVKLPLEILLMVFNSIAF 434
GL TS + S VF + L + LW++N + L +++ + NS+
Sbjct: 18 GLTNALTSITVKVSFVFLATVILLSYYFAVLAIRALWNNNIFSNSTRLILIVCLLNSVVH 77
Query: 435 QNTI 446
Q+T+
Sbjct: 78 QSTM 81
>Z81587-2|CAB04702.2| 339|Caenorhabditis elegans Hypothetical
protein T06G6.2 protein.
Length = 339
Score = 27.1 bits (57), Expect = 10.0
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = +3
Query: 258 GLYLCFTSAKLA-TSVFAIVLFFLGNFGITAGAHRLWSHNGYKVKLPLEILLMVFNSIAF 434
GL TS + +SV + + L + LW +N + L +L+ + NSI
Sbjct: 18 GLTNALTSITVKMSSVLVVTVILLSYYFARLAIRTLWKNNIFSNSTRLILLVCLLNSIIH 77
Query: 435 QNTI 446
Q T+
Sbjct: 78 QTTM 81
>Z69646-8|CAA93477.3| 896|Caenorhabditis elegans Hypothetical
protein F59F5.7 protein.
Length = 896
Score = 27.1 bits (57), Expect = 10.0
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +3
Query: 111 VDKTNETEYLKDNHVDYEKLIAPQ 182
+ KTN+ EYL +D + L+ P+
Sbjct: 137 IPKTNQVEYLMQRELDMQTLVPPE 160
>Z50794-7|CAA90661.3| 896|Caenorhabditis elegans Hypothetical
protein F59F5.7 protein.
Length = 896
Score = 27.1 bits (57), Expect = 10.0
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +3
Query: 111 VDKTNETEYLKDNHVDYEKLIAPQ 182
+ KTN+ EYL +D + L+ P+
Sbjct: 137 IPKTNQVEYLMQRELDMQTLVPPE 160
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,288,906
Number of Sequences: 27780
Number of extensions: 274351
Number of successful extensions: 736
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 719
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 736
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1247656244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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