Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0138
         (590 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g06080.1 68414.m00637 delta 9 desaturase (ADS1) identical to ...    80   1e-15
At1g06360.1 68414.m00672 fatty acid desaturase family protein si...    79   2e-15
At2g31360.1 68415.m03831 delta 9 desaturase (ADS2) identical to ...    77   9e-15
At1g06350.1 68414.m00671 fatty acid desaturase family protein si...    75   4e-14
At3g15870.1 68416.m02007 fatty acid desaturase family protein si...    74   6e-14
At1g06100.1 68414.m00639 fatty acid desaturase family protein si...    73   1e-13
At3g15850.1 68416.m02005 fatty acid desaturase family protein si...    72   3e-13
At1g06090.1 68414.m00638 fatty acid desaturase family protein si...    72   3e-13
At1g06120.1 68414.m00641 fatty acid desaturase family protein si...    71   8e-13
At1g72520.1 68414.m08386 lipoxygenase, putative similar to lipox...    28   5.4  
At5g41180.1 68418.m05005 leucine-rich repeat protein kinase, put...    27   7.1  
At5g41880.1 68418.m05099 DNA primase small subunit family contai...    27   9.4  
At4g33730.1 68417.m04789 pathogenesis-related protein, putative ...    27   9.4  
At4g17140.1 68417.m02580 pleckstrin homology (PH) domain-contain...    27   9.4  
At1g78420.1 68414.m09138 expressed protein                             27   9.4  
At1g61080.1 68414.m06877 proline-rich family protein                   27   9.4  

>At1g06080.1 68414.m00637 delta 9 desaturase (ADS1) identical to
           delta 9 acyl-lipid desaturase (ADS1) GB:BAA25180
           GI:2970034 from [Arabidopsis thaliana]
          Length = 305

 Score = 79.8 bits (188), Expect = 1e-15
 Identities = 33/82 (40%), Positives = 47/82 (57%)
 Frame = +3

Query: 306 AIVLFFLGNFGITAGAHRLWSHNGYKVKLPLEILLMVFNSIAFQNTIFTWVRDHRLHHKY 485
           A++++ +G  GIT   HR  +H  +KV   LE        +A Q     WV  HR HH++
Sbjct: 67  ALIVYTVGGLGITVSYHRNLAHRSFKVPKWLEYFFAYCGLLAIQGDPIDWVSTHRYHHQF 126

Query: 486 TDTDADPHNATRGFFFSHIGWL 551
           TD+D DPH+   GF+FSH+ WL
Sbjct: 127 TDSDRDPHSPNEGFWFSHLLWL 148


>At1g06360.1 68414.m00672 fatty acid desaturase family protein
           similar to delta 9 acyl-lipid desaturase (ADS1)
           GI:2970034 from [Arabidopsis thaliana]
          Length = 299

 Score = 79.4 bits (187), Expect = 2e-15
 Identities = 36/96 (37%), Positives = 51/96 (53%)
 Frame = +3

Query: 303 FAIVLFFLGNFGITAGAHRLWSHNGYKVKLPLEILLMVFNSIAFQNTIFTWVRDHRLHHK 482
           F  VL+ L +  IT   HR  +H  +K+   LE  L  F   A Q     WV  HR HH+
Sbjct: 60  FGFVLYALTSLSITFSYHRNLAHRSFKLPKWLEYPLAYFAVFALQGDPLDWVSIHRFHHQ 119

Query: 483 YTDTDADPHNATRGFFFSHIGWLLVRKHPMVKIAGK 590
           +TD+D DPH+   GF+FSH+ W+   ++   K  G+
Sbjct: 120 FTDSDRDPHSPIEGFWFSHVWWICDTRYIKYKCGGR 155


>At2g31360.1 68415.m03831 delta 9 desaturase (ADS2) identical to
           delta 9 acyl-lipid desaturase (ADS2) GI:2970036 from
           [Arabidopsis thaliana]
          Length = 307

 Score = 77.0 bits (181), Expect = 9e-15
 Identities = 34/87 (39%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
 Frame = +3

Query: 294 TSVFAIVLFF-LGNFGITAGAHRLWSHNGYKVKLPLEILLMVFNSIAFQNTIFTWVRDHR 470
           ++++   LF+ +G  GIT   HR  +H  +KV   LE LL     +A Q     WV  HR
Sbjct: 64  SALWVTFLFYTIGGLGITVSYHRNLAHRSFKVPKWLEYLLAYCALLAIQGDPIDWVSTHR 123

Query: 471 LHHKYTDTDADPHNATRGFFFSHIGWL 551
            HH++TD++ DPH+   GF+FSH+ W+
Sbjct: 124 YHHQFTDSERDPHSPKEGFWFSHLLWI 150


>At1g06350.1 68414.m00671 fatty acid desaturase family protein
           similar to delta 9 acyl-lipid desaturase (ADS1)
           GI:2970034 from [Arabidopsis thaliana]
          Length = 300

 Score = 74.9 bits (176), Expect = 4e-14
 Identities = 43/127 (33%), Positives = 60/127 (47%)
 Frame = +3

Query: 210 VMNVIRFSYLHIAGLYGLYLCFTSAKLATSVFAIVLFFLGNFGITAGAHRLWSHNGYKVK 389
           +++V+R S + I     L   F + K     F +VLF L    IT   HR  SH  +K+ 
Sbjct: 31  LVDVVRASVVVIVHFLCLLAPF-NFKWEALRFGLVLFALTTLSITFSFHRNLSHRSFKIP 89

Query: 390 LPLEILLMVFNSIAFQNTIFTWVRDHRLHHKYTDTDADPHNATRGFFFSHIGWLLVRKHP 569
             LE         A Q     WV  HR HH++TD+D DPH+   G  FSHI W+   ++ 
Sbjct: 90  KWLEYPWAYSAVFALQGDPMDWVSIHRFHHQFTDSDRDPHSPKEGLLFSHILWIFDTQYI 149

Query: 570 MVKIAGK 590
             K  G+
Sbjct: 150 KYKCGGR 156


>At3g15870.1 68416.m02007 fatty acid desaturase family protein
           similar to delta 9 acyl-lipid desaturase (ADS1)
           GI:2970034 from [Arabidopsis thaliana]
          Length = 292

 Score = 74.1 bits (174), Expect = 6e-14
 Identities = 32/79 (40%), Positives = 44/79 (55%)
 Frame = +3

Query: 315 LFFLGNFGITAGAHRLWSHNGYKVKLPLEILLMVFNSIAFQNTIFTWVRDHRLHHKYTDT 494
           L F+    IT   HR  SH  + +   LE L      +AFQ     WV +HR HHK+ +T
Sbjct: 58  LVFINGICITLSYHRNLSHRSFDLPKWLEYLFAYGGVLAFQGDPIEWVSNHRYHHKHCET 117

Query: 495 DADPHNATRGFFFSHIGWL 551
             DPH+ T+GF+FSH+ W+
Sbjct: 118 QRDPHSPTQGFWFSHMAWI 136


>At1g06100.1 68414.m00639 fatty acid desaturase family protein
           similar to delta 9 acyl-lipid desaturase (ADS1)
           GI:2970034 from [Arabidopsis thaliana]
          Length = 299

 Score = 72.9 bits (171), Expect = 1e-13
 Identities = 33/83 (39%), Positives = 45/83 (54%)
 Frame = +3

Query: 303 FAIVLFFLGNFGITAGAHRLWSHNGYKVKLPLEILLMVFNSIAFQNTIFTWVRDHRLHHK 482
           F I+L  L N  IT   HR  +H  +K+   LE        +A Q     WV  HR HH+
Sbjct: 60  FGIILAILTNLCITFSYHRNLTHRSFKLPKWLEYPFAYSALLALQGDPLDWVSIHRFHHQ 119

Query: 483 YTDTDADPHNATRGFFFSHIGWL 551
           +TD+D DPH+   GF+FSH+ W+
Sbjct: 120 FTDSDRDPHSPIEGFWFSHVLWI 142


>At3g15850.1 68416.m02005 fatty acid desaturase family protein
           similar to delta 9 acyl-lipid desaturase (ADS1)
           GI:2970034 from [Arabidopsis thaliana]
          Length = 371

 Score = 72.1 bits (169), Expect = 3e-13
 Identities = 34/87 (39%), Positives = 45/87 (51%)
 Frame = +3

Query: 291 ATSVFAIVLFFLGNFGITAGAHRLWSHNGYKVKLPLEILLMVFNSIAFQNTIFTWVRDHR 470
           A SV   +    G  GIT   HR  SH  +K+   LE L     + A Q     WV  HR
Sbjct: 127 AVSVAFGLYIVTGLLGITLSFHRNLSHKAFKLPKWLEYLFAYCGAQALQGNPIDWVSTHR 186

Query: 471 LHHKYTDTDADPHNATRGFFFSHIGWL 551
            HH++ D+D DPH+   GF+FSH+ W+
Sbjct: 187 YHHQFCDSDRDPHSPLDGFWFSHMNWM 213


>At1g06090.1 68414.m00638 fatty acid desaturase family protein
           similar to delta 9 acyl-lipid desaturase GB:BAA25180
           GI:2970034 (ADS1) from [Arabidopsis thaliana]
          Length = 299

 Score = 72.1 bits (169), Expect = 3e-13
 Identities = 32/96 (33%), Positives = 48/96 (50%)
 Frame = +3

Query: 303 FAIVLFFLGNFGITAGAHRLWSHNGYKVKLPLEILLMVFNSIAFQNTIFTWVRDHRLHHK 482
           F ++L  + +  IT   HR  +H  +K+   LE         A Q     WV  HR HH+
Sbjct: 60  FGVILAIVTSLSITFSYHRNLTHKSFKLPKWLEYPFAYSALFALQGHPIDWVSTHRFHHQ 119

Query: 483 YTDTDADPHNATRGFFFSHIGWLLVRKHPMVKIAGK 590
           +TD+D DPH+   GF+FSH+ W+    +   K  G+
Sbjct: 120 FTDSDRDPHSPIEGFWFSHVFWIFDTSYIREKCGGR 155


>At1g06120.1 68414.m00641 fatty acid desaturase family protein
           similar to delta 9 acyl-lipid desaturase GB:BAA25180
           GI:2970034 (ADS1) from [Arabidopsis thaliana]; supported
           by cDNA:gi_12083275_gb_AF332434.1_AF332434
          Length = 299

 Score = 70.5 bits (165), Expect = 8e-13
 Identities = 33/96 (34%), Positives = 47/96 (48%)
 Frame = +3

Query: 303 FAIVLFFLGNFGITAGAHRLWSHNGYKVKLPLEILLMVFNSIAFQNTIFTWVRDHRLHHK 482
           FA ++    N  IT   HR  +H  +K+   LE         A Q     WV  HR HH+
Sbjct: 60  FAAMVGISTNLSITFSYHRNLTHRSFKLPKWLEYPFAYSALFALQGHPIDWVSTHRFHHQ 119

Query: 483 YTDTDADPHNATRGFFFSHIGWLLVRKHPMVKIAGK 590
           +TD+D DPH+   GF+FSH+ W+    +   K  G+
Sbjct: 120 FTDSDRDPHSPIEGFWFSHVFWIFDTSYIREKCGGR 155


>At1g72520.1 68414.m08386 lipoxygenase, putative similar to
           lipoxygenase gi:1495804 [Solanum tuberosum], gi:1654140
           [Lycopersicon esculentum], GB:CAB56692 [Arabidopsis
           thaliana]
          Length = 926

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 13/47 (27%), Positives = 17/47 (36%)
 Frame = +2

Query: 404 PVDGLQQYCFSEHHFHMGERSQATSQVYGH*CRPS*CYERFFFLTHR 544
           PVD    + +     H+G       Q+  H  R   C E F    HR
Sbjct: 556 PVDATSNWMWQLAKAHVGSNDAGVHQLVNHWLRTHACLEPFILAAHR 602


>At5g41180.1 68418.m05005 leucine-rich repeat protein kinase,
           putative contains leucine rich repeat (LRR) domains,
           Pfam:PF00560; contains protein kinase domain,
           Pfam:PF00069
          Length = 664

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +1

Query: 280 QQNWLHRFLLLCYSSLGTLVLQLELIVCGLIMVTKS 387
           +Q WL  F ++  SS+G L L +    C L  + +S
Sbjct: 273 RQTWLRNFEIVTGSSVGLLFLVVMFSACSLCKIKRS 308


>At5g41880.1 68418.m05099 DNA primase small subunit family contains
           Pfam profile: PF01896 DNA primase small subunit
          Length = 407

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = -1

Query: 236 IAKTYHVHHYNFVFDGRGLGCNEFF 162
           I   ++VH+    +DG+  GC+E++
Sbjct: 22  IENDFNVHYLRIYYDGKHPGCDEYY 46


>At4g33730.1 68417.m04789 pathogenesis-related protein, putative
           similar to SP|P33154 Pathogenesis-related protein 1
           precursor (PR-1) {Arabidopsis thaliana}; contains Pfam
           profile PF00188: SCP-like extracellular protein
          Length = 172

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 13/48 (27%), Positives = 23/48 (47%)
 Frame = +3

Query: 378 YKVKLPLEILLMVFNSIAFQNTIFTWVRDHRLHHKYTDTDADPHNATR 521
           +KV +   +LL++ N +   +        +   H+Y D+   PHNA R
Sbjct: 3   HKVAIETLVLLLLINYLTQIDVSSAQYSQYPQSHEYPDSYLRPHNAAR 50


>At4g17140.1 68417.m02580 pleckstrin homology (PH) domain-containing
           protein contains Pfam profile PF00169: PH domain
          Length = 1322

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +3

Query: 309 IVLFFLGNFGITAGAHRLWSH 371
           + LFFL + G     HRLW H
Sbjct: 277 LYLFFLTDAGFLRNLHRLWKH 297


>At1g78420.1 68414.m09138 expressed protein
          Length = 401

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +2

Query: 407 VDGLQQYCFSEHHFHMGERSQATSQV 484
           VDG+  +    HH+ MGE   + S V
Sbjct: 322 VDGIDNHHHHRHHYEMGETGSSNSYV 347


>At1g61080.1 68414.m06877 proline-rich family protein 
          Length = 907

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 19/54 (35%), Positives = 26/54 (48%)
 Frame = +3

Query: 48  LNNLY*VDKIEI*ITKMPPNSVDKTNETEYLKDNHVDYEKLIAPQASPIKHKIV 209
           LN L  +DK+E   TK+    VD ++    L       EKL++P A P   K V
Sbjct: 810 LNQL--LDKVERYFTKIKETMVDISSNCMELALKEKRDEKLVSPDAKPSLKKTV 861


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,205,911
Number of Sequences: 28952
Number of extensions: 246201
Number of successful extensions: 555
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 549
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 555
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1171109464
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)