Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0136
(682 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U68567-1|AAC50812.1| 988|Homo sapiens lysosomal acid alpha-mann... 50 8e-06
U60899-1|AAC51362.1| 1010|Homo sapiens lysosomal alpha-mannosida... 50 8e-06
U60266-1|AAC34130.1| 1011|Homo sapiens lysosomal alpha-mannosida... 50 8e-06
U05572-1|AAB03816.1| 987|Homo sapiens alpha-mannosidase protein. 50 8e-06
BC000736-1|AAH00736.1| 1011|Homo sapiens mannosidase, alpha, cla... 50 8e-06
AB209921-1|BAD93158.1| 1007|Homo sapiens mannosidase, alpha, cla... 50 8e-06
AK128281-1|BAC87365.1| 121|Homo sapiens protein ( Homo sapiens ... 31 2.9
BC113695-1|AAI13696.1| 346|Homo sapiens FFAR3 protein protein. 30 8.8
BC035657-1|AAH35657.1| 346|Homo sapiens free fatty acid recepto... 30 8.8
AF024689-1|AAB86712.1| 346|Homo sapiens putative G protein-coup... 30 8.8
AF024688-1|AAB86711.1| 346|Homo sapiens putative G protein-coup... 30 8.8
AC002511-1|AAB67885.1| 346|Homo sapiens PC28130_1 protein. 30 8.8
>U68567-1|AAC50812.1| 988|Homo sapiens lysosomal acid
alpha-mannosidase protein.
Length = 988
Score = 50.0 bits (114), Expect = 8e-06
Identities = 30/83 (36%), Positives = 47/83 (56%), Gaps = 9/83 (10%)
Frame = +2
Query: 92 VKTPMPDGLHLLTLEPWG-DQILLRIENYKTGAEDS------TIEIDLQGIFNGIHIKSV 250
++ +P +HLLTL WG + +LLR+E+ EDS + ++L+ +F+ I +
Sbjct: 869 LRRDLPPSVHLLTLASWGPEMVLLRLEHQFAVGEDSGRNLSAPVTLNLRDLFSTFTITRL 928
Query: 251 KETTLAANQWLDDYD--KWTWNT 313
+ETTL ANQ + KWT NT
Sbjct: 929 QETTLVANQLREAASRLKWTTNT 951
>U60899-1|AAC51362.1| 1010|Homo sapiens lysosomal alpha-mannosidase
protein.
Length = 1010
Score = 50.0 bits (114), Expect = 8e-06
Identities = 30/83 (36%), Positives = 47/83 (56%), Gaps = 9/83 (10%)
Frame = +2
Query: 92 VKTPMPDGLHLLTLEPWG-DQILLRIENYKTGAEDS------TIEIDLQGIFNGIHIKSV 250
++ +P +HLLTL WG + +LLR+E+ EDS + ++L+ +F+ I +
Sbjct: 891 LRRDLPPSVHLLTLASWGPEMVLLRLEHQFAVGEDSGRNLSAPVTLNLRDLFSTFTITRL 950
Query: 251 KETTLAANQWLDDYD--KWTWNT 313
+ETTL ANQ + KWT NT
Sbjct: 951 QETTLVANQLREAASRLKWTTNT 973
>U60266-1|AAC34130.1| 1011|Homo sapiens lysosomal alpha-mannosidase
protein.
Length = 1011
Score = 50.0 bits (114), Expect = 8e-06
Identities = 30/83 (36%), Positives = 47/83 (56%), Gaps = 9/83 (10%)
Frame = +2
Query: 92 VKTPMPDGLHLLTLEPWG-DQILLRIENYKTGAEDS------TIEIDLQGIFNGIHIKSV 250
++ +P +HLLTL WG + +LLR+E+ EDS + ++L+ +F+ I +
Sbjct: 892 LRRDLPPSVHLLTLASWGPEMVLLRLEHQFAVGEDSGRNLSAPVTLNLRDLFSTFTITRL 951
Query: 251 KETTLAANQWLDDYD--KWTWNT 313
+ETTL ANQ + KWT NT
Sbjct: 952 QETTLVANQLREAASRLKWTTNT 974
>U05572-1|AAB03816.1| 987|Homo sapiens alpha-mannosidase protein.
Length = 987
Score = 50.0 bits (114), Expect = 8e-06
Identities = 30/83 (36%), Positives = 47/83 (56%), Gaps = 9/83 (10%)
Frame = +2
Query: 92 VKTPMPDGLHLLTLEPWG-DQILLRIENYKTGAEDS------TIEIDLQGIFNGIHIKSV 250
++ +P +HLLTL WG + +LLR+E+ EDS + ++L+ +F+ I +
Sbjct: 868 LRRDLPPSVHLLTLASWGPEMVLLRLEHQFAVGEDSGRNLSAPVTLNLRDLFSTFTITRL 927
Query: 251 KETTLAANQWLDDYD--KWTWNT 313
+ETTL ANQ + KWT NT
Sbjct: 928 QETTLVANQLREAASRLKWTTNT 950
>BC000736-1|AAH00736.1| 1011|Homo sapiens mannosidase, alpha, class
2B, member 1 protein.
Length = 1011
Score = 50.0 bits (114), Expect = 8e-06
Identities = 30/83 (36%), Positives = 47/83 (56%), Gaps = 9/83 (10%)
Frame = +2
Query: 92 VKTPMPDGLHLLTLEPWG-DQILLRIENYKTGAEDS------TIEIDLQGIFNGIHIKSV 250
++ +P +HLLTL WG + +LLR+E+ EDS + ++L+ +F+ I +
Sbjct: 892 LRRDLPPSVHLLTLASWGPEMVLLRLEHQFAVGEDSGRNLSAPVTLNLRDLFSTFTITRL 951
Query: 251 KETTLAANQWLDDYD--KWTWNT 313
+ETTL ANQ + KWT NT
Sbjct: 952 QETTLVANQLREAASRLKWTTNT 974
>AB209921-1|BAD93158.1| 1007|Homo sapiens mannosidase, alpha, class
2B, member 1 precursor variant protein.
Length = 1007
Score = 50.0 bits (114), Expect = 8e-06
Identities = 30/83 (36%), Positives = 47/83 (56%), Gaps = 9/83 (10%)
Frame = +2
Query: 92 VKTPMPDGLHLLTLEPWG-DQILLRIENYKTGAEDS------TIEIDLQGIFNGIHIKSV 250
++ +P +HLLTL WG + +LLR+E+ EDS + ++L+ +F+ I +
Sbjct: 888 LRRDLPPSVHLLTLASWGPEMVLLRLEHQFAVGEDSGRNLSAPVTLNLRDLFSTFTITRL 947
Query: 251 KETTLAANQWLDDYD--KWTWNT 313
+ETTL ANQ + KWT NT
Sbjct: 948 QETTLVANQLREAASRLKWTTNT 970
>AK128281-1|BAC87365.1| 121|Homo sapiens protein ( Homo sapiens
cDNA FLJ46418 fis, clone THYMU3012907. ).
Length = 121
Score = 31.5 bits (68), Expect = 2.9
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -2
Query: 192 SSAPVL*FSILNRIWSPQGSRVSRWSPSG 106
SSAPV L +W+PQ RV+ W P G
Sbjct: 20 SSAPVHRQGRLRTVWAPQHQRVAPWHPPG 48
>BC113695-1|AAI13696.1| 346|Homo sapiens FFAR3 protein protein.
Length = 346
Score = 29.9 bits (64), Expect = 8.8
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 288 SSSHWFAASVVSFTLLIWIPLNM 220
S +HWF SV T L+ +PLN+
Sbjct: 11 SGNHWFVFSVYLLTFLVGLPLNL 33
>BC035657-1|AAH35657.1| 346|Homo sapiens free fatty acid receptor 3
protein.
Length = 346
Score = 29.9 bits (64), Expect = 8.8
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 288 SSSHWFAASVVSFTLLIWIPLNM 220
S +HWF SV T L+ +PLN+
Sbjct: 11 SGNHWFVFSVYLLTFLVGLPLNL 33
>AF024689-1|AAB86712.1| 346|Homo sapiens putative G protein-coupled
receptor protein.
Length = 346
Score = 29.9 bits (64), Expect = 8.8
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 288 SSSHWFAASVVSFTLLIWIPLNM 220
S +HWF SV T L+ +PLN+
Sbjct: 11 SGNHWFVFSVYLLTFLVGLPLNL 33
>AF024688-1|AAB86711.1| 346|Homo sapiens putative G protein-coupled
receptor protein.
Length = 346
Score = 29.9 bits (64), Expect = 8.8
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 288 SSSHWFAASVVSFTLLIWIPLNM 220
S +HWF SV T L+ +PLN+
Sbjct: 11 SGNHWFVFSVYLLTFLVGLPLNL 33
>AC002511-1|AAB67885.1| 346|Homo sapiens PC28130_1 protein.
Length = 346
Score = 29.9 bits (64), Expect = 8.8
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 288 SSSHWFAASVVSFTLLIWIPLNM 220
S +HWF SV T L+ +PLN+
Sbjct: 11 SGNHWFVFSVYLLTFLVGLPLNL 33
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,381,222
Number of Sequences: 237096
Number of extensions: 2166475
Number of successful extensions: 4595
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4434
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4589
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7727256732
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -