Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0135
         (723 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2I853 Cluster: AAEL002532-PA; n=2; Aedes aegypti|Rep: ...    61   2e-08
UniRef50_UPI0000D556D8 Cluster: PREDICTED: similar to CG3707-PA,...    57   4e-07
UniRef50_UPI0000DB6F07 Cluster: PREDICTED: similar to wings apar...    56   1e-06
UniRef50_Q9W517 Cluster: Protein wings apart-like; n=3; Endopter...    50   8e-05
UniRef50_UPI0000DC16A3 Cluster: UPI0000DC16A3 related cluster; n...    33   5.4  
UniRef50_Q9G8W1 Cluster: Orf207; n=1; Rhodomonas salina|Rep: Orf...    33   9.4  

>UniRef50_A2I853 Cluster: AAEL002532-PA; n=2; Aedes aegypti|Rep:
           AAEL002532-PA - Aedes aegypti (Yellowfever mosquito)
          Length = 1598

 Score = 61.3 bits (142), Expect = 2e-08
 Identities = 32/67 (47%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
 Frame = +3

Query: 462 VPLDSALF-RENSNCPTAARSAGTVGKWGITSFTSIRSAPYAYSSNVLKKPVQDQNSPLT 638
           VP+DS L  +EN+N P   RSAG VG+WGITSFTSIR+  Y + S   K+   D N P +
Sbjct: 12  VPIDSLLKEKENTNRPAPLRSAGLVGRWGITSFTSIRNTSYEFESTSPKES-DDLNCPSS 70

Query: 639 VPAVEAE 659
           V ++  +
Sbjct: 71  VASLSTQ 77


>UniRef50_UPI0000D556D8 Cluster: PREDICTED: similar to CG3707-PA,
           isoform A; n=1; Tribolium castaneum|Rep: PREDICTED:
           similar to CG3707-PA, isoform A - Tribolium castaneum
          Length = 1028

 Score = 57.2 bits (132), Expect = 4e-07
 Identities = 25/32 (78%), Positives = 30/32 (93%)
 Frame = +3

Query: 480 LFRENSNCPTAARSAGTVGKWGITSFTSIRSA 575
           LF+EN+N P+AARSA TVGKWGITSFTSIR++
Sbjct: 23  LFKENANKPSAARSAATVGKWGITSFTSIRTS 54


>UniRef50_UPI0000DB6F07 Cluster: PREDICTED: similar to wings
           apart-like CG3707-PA, isoform A isoform 1; n=1; Apis
           mellifera|Rep: PREDICTED: similar to wings apart-like
           CG3707-PA, isoform A isoform 1 - Apis mellifera
          Length = 1191

 Score = 55.6 bits (128), Expect = 1e-06
 Identities = 25/28 (89%), Positives = 27/28 (96%)
 Frame = +3

Query: 489 ENSNCPTAARSAGTVGKWGITSFTSIRS 572
           ENSN P+AA+SAGTVGKWGITSFTSIRS
Sbjct: 33  ENSNRPSAAKSAGTVGKWGITSFTSIRS 60


>UniRef50_Q9W517 Cluster: Protein wings apart-like; n=3;
           Endopterygota|Rep: Protein wings apart-like - Drosophila
           melanogaster (Fruit fly)
          Length = 1741

 Score = 49.6 bits (113), Expect = 8e-05
 Identities = 24/40 (60%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
 Frame = +3

Query: 456 VAVPLDSALF-RENSNCPTAARSAGTVGKWGITSFTSIRS 572
           + VPLDS    +EN+N PT ARS GTVGKWG   FTS R+
Sbjct: 8   IVVPLDSLCKEKENTNRPTVARSVGTVGKWGKMGFTSTRT 47


>UniRef50_UPI0000DC16A3 Cluster: UPI0000DC16A3 related cluster; n=1;
           Rattus norvegicus|Rep: UPI0000DC16A3 UniRef100 entry -
           Rattus norvegicus
          Length = 210

 Score = 33.5 bits (73), Expect = 5.4
 Identities = 19/64 (29%), Positives = 33/64 (51%)
 Frame = -3

Query: 613 TGFLRTLLEYA*GALRIDVKLVIPHFPTVPAERAAVGQLLFSLNRALSSGTATLPPLPLP 434
           TG++  ++ Y   A++    L IP+FP +  + A  G++L  L   + +  +T   LPLP
Sbjct: 65  TGYIEQMVHYIPTAVQNHDHLSIPNFPAISPKFATTGEVL-DLMLTMGASDSTSLQLPLP 123

Query: 433 QRDI 422
              I
Sbjct: 124 HSAI 127


>UniRef50_Q9G8W1 Cluster: Orf207; n=1; Rhodomonas salina|Rep: Orf207
           - Rhodomonas salina (Cryptomonas salina)
          Length = 207

 Score = 32.7 bits (71), Expect = 9.4
 Identities = 13/25 (52%), Positives = 18/25 (72%)
 Frame = +2

Query: 179 LKTVIVGKVYRPWKNGGCVIFMGCV 253
           LK  I+G++YRP+KNG  V+  G V
Sbjct: 108 LKNFIMGQIYRPFKNGFIVVISGLV 132


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 654,784,628
Number of Sequences: 1657284
Number of extensions: 11916897
Number of successful extensions: 27575
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 26793
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27569
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 58677691418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)