Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0134
(749 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0512 + 18226981-18227143,18227648-18229555,18229649-182302... 35 0.060
04_04_1144 + 31222556-31222633,31223238-31227665,31227724-312277... 34 0.10
08_01_0418 - 3716226-3716279,3716531-3716581,3716656-3716751,371... 33 0.18
03_05_0109 - 20903013-20903062,20903406-20903538,20903631-209037... 33 0.24
02_01_0369 + 2649178-2655291,2655773-2656601,2656737-2657425,265... 33 0.24
06_02_0306 + 14115751-14116450,14116882-14117691,14118957-14119141 30 1.7
08_02_0079 + 12005624-12005921,12006144-12006550,12007250-12007840 29 3.9
05_06_0136 + 25928152-25928659,25928767-25928899,25928987-259290... 29 3.9
05_04_0226 + 19215091-19215172,19215281-19215394,19215508-192155... 29 3.9
08_02_0360 + 16196712-16197560,16198126-16198875 29 5.2
06_02_0331 - 14503063-14503697,14503744-14504019,14504353-14504635 29 5.2
01_05_0044 + 17531005-17531739,17532624-17532956,17532968-17533027 29 5.2
03_05_0310 + 23008915-23009841,23010401-23011162 28 6.9
01_01_0711 + 5506632-5507328,5507410-5507485,5507544-5508234 28 6.9
09_06_0234 - 21747724-21747839,21748027-21748096,21749157-217492... 28 9.1
08_02_0936 - 22771416-22771702,22772297-22772393,22772951-22773847 28 9.1
05_04_0393 - 20895485-20895645,20895750-20896358,20896541-208966... 28 9.1
>09_04_0512 + 18226981-18227143,18227648-18229555,18229649-18230295,
18230710-18231949,18232085-18232419,18232500-18232577,
18232872-18232978,18233020-18233062
Length = 1506
Score = 35.1 bits (77), Expect = 0.060
Identities = 22/93 (23%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Frame = +2
Query: 179 QKETYHKSMIQLKERKEMDEAFKKAQKPWSKLLQKVERARLEYHTACKQERTAQNQERNA 358
+K+ K++ + K ++E K+ ++ K K+ER RL+ KQ++ Q ++R+A
Sbjct: 1321 KKDVRVKALEAAEAAKRLEEK-KQNEREMRKAAAKLERERLKQEKELKQKQEEQKKKRDA 1379
Query: 359 --SGDSSFSPDQVKKMADRVSKCRDEVSKNREK 451
+ ++ +K R KC +E K +++
Sbjct: 1380 DVAAKKRQRGEEERKEKQRKRKCTEEARKQQKQ 1412
>04_04_1144 + 31222556-31222633,31223238-31227665,31227724-31227789,
31227790-31228014,31228097-31228255,31228393-31228551,
31228855-31229013,31229371-31229490,31229604-31229825
Length = 1871
Score = 34.3 bits (75), Expect = 0.10
Identities = 27/118 (22%), Positives = 48/118 (40%), Gaps = 4/118 (3%)
Frame = +2
Query: 116 DLHLSVRDRLVN----DVMAQIKNWQKETYHKSMIQLKERKEMDEAFKKAQKPWSKLLQK 283
+LH+S +R + M +I+ Q ET K + +E + +LL+
Sbjct: 1579 ELHISKLERQITLSELKYMEEIQTMQVETTEKDEALTTKMQEHANLVHEKDALEQQLLEV 1638
Query: 284 VERARLEYHTACKQERTAQNQERNASGDSSFSPDQVKKMADRVSKCRDEVSKNREKYQ 457
+ YHT QE +E FS DQ++ V++ +VS +++ Q
Sbjct: 1639 RKELNDAYHTIANQEEQVSVREIKWDAYKKFSEDQLEAEQQHVAELEVQVSSLKQQLQ 1696
>08_01_0418 -
3716226-3716279,3716531-3716581,3716656-3716751,
3717037-3717194,3717303-3717417,3717511-3717564,
3717843-3717950,3718494-3718583,3718818-3718856,
3718993-3719172,3719264-3719576,3719659-3719834
Length = 477
Score = 33.5 bits (73), Expect = 0.18
Identities = 23/82 (28%), Positives = 44/82 (53%)
Frame = +2
Query: 236 EAFKKAQKPWSKLLQKVERARLEYHTACKQERTAQNQERNASGDSSFSPDQVKKMADRVS 415
E K AQ+ SKLL K+ + + A ++++TA+ + +NA ++ S + + S
Sbjct: 243 ELVKLAQEN-SKLLPKIVESPEKLQRALEEKKTARAELKNAEKIATQSVQEKTATLEIYS 301
Query: 416 KCRDEVSKNREKYQTALAEITA 481
K +++SK+ K Q ++TA
Sbjct: 302 KGYEKLSKHSTKIQALQEQVTA 323
>03_05_0109 -
20903013-20903062,20903406-20903538,20903631-20903726,
20904011-20904168,20904278-20904392,20904486-20904539,
20904818-20904925,20905406-20905495,20905907-20906086,
20906204-20906516,20906619-20906794
Length = 490
Score = 33.1 bits (72), Expect = 0.24
Identities = 29/103 (28%), Positives = 51/103 (49%)
Frame = +2
Query: 173 NWQKETYHKSMIQLKERKEMDEAFKKAQKPWSKLLQKVERARLEYHTACKQERTAQNQER 352
N +KE H+ K K E K AQ+ SKLL K+ ++ + A ++++TA+ + +
Sbjct: 214 NDKKEETHR-----KIAKSDFELVKLAQEN-SKLLSKIVQSPEKLQRALEEKKTARAELK 267
Query: 353 NASGDSSFSPDQVKKMADRVSKCRDEVSKNREKYQTALAEITA 481
NA + S + + SK +++SK+ K Q + TA
Sbjct: 268 NAEKIAMQSVQEKTATLEIYSKGYEKLSKHSSKIQALQEQFTA 310
>02_01_0369 + 2649178-2655291,2655773-2656601,2656737-2657425,
2657523-2657649,2657731-2657812,2658172-2658196
Length = 2621
Score = 33.1 bits (72), Expect = 0.24
Identities = 25/105 (23%), Positives = 44/105 (41%), Gaps = 3/105 (2%)
Frame = +2
Query: 152 DVMAQIKNWQKETYHKSMIQLKERKEMDEAFKKAQKPWSKLLQKVERARLEYHTACKQER 331
++ A + Q+E K + E+ K+A+ +L ++E AR+E H K
Sbjct: 2213 ELKATVLELQQELQEKHIQISTISAELASQVKEAESSAKQLSVELENARMEIHNLEKHSE 2272
Query: 332 TAQNQERNASGDSSFSPDQVKKMAD---RVSKCRDEVSKNREKYQ 457
NQ++N S D D R+ DE+SK ++ +
Sbjct: 2273 MLLNQKKNLETQVSELKDMEAVAHDQHGRIKDLSDELSKKDQEIE 2317
>06_02_0306 + 14115751-14116450,14116882-14117691,14118957-14119141
Length = 564
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +2
Query: 158 MAQIKNWQKETYHKSMIQLKERKEM-DEAFK-KAQKPWSKLLQKVERARLEYH 310
+A+++ W+++ YH S I + K D+ K K KP K+L R +L H
Sbjct: 153 LAELEEWREKAYHNSKIYKERTKRWHDKRIKNKKFKPGDKVLMFNSRVKLFGH 205
>08_02_0079 + 12005624-12005921,12006144-12006550,12007250-12007840
Length = 431
Score = 29.1 bits (62), Expect = 3.9
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +2
Query: 158 MAQIKNWQKETYHKSMIQLKERKEM--DEAFK-KAQKPWSKLLQKVERARLEYH 310
+A+++ W++ YH I KERK+ D+ K K KP K+L R +L H
Sbjct: 150 IAELEEWRERAYHNVRI-CKERKKRWHDKRIKIKKFKPGDKVLMFNSRVKLFGH 202
>05_06_0136 +
25928152-25928659,25928767-25928899,25928987-25929058,
25929150-25929221,25929507-25929670,25929760-25930025,
25930115-25930241,25930599-25930667,25930765-25930957,
25931053-25931299,25931342-25931470,25932367-25932654
Length = 755
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/78 (19%), Positives = 31/78 (39%)
Frame = +2
Query: 503 DMTSVFDRCQQMEAQRLKFFKDVLFSFHKCLNISQEPSLPQIYEEFHHTINNADSQKDLK 682
D+ + +C + R DV+ +CL + +E +T NN+
Sbjct: 660 DVADIAFKCTAQVSARRPTMTDVVAQLQECLELEEEHCAVNDANNNFYTSNNSKPNSSYD 719
Query: 683 WWANNHGVNMAMAWPQFE 736
+A +H ++++ FE
Sbjct: 720 TYAADHSIDVSQNSVAFE 737
>05_04_0226 +
19215091-19215172,19215281-19215394,19215508-19215590,
19215682-19215820,19215862-19216191,19216414-19216693,
19216795-19216956,19217134-19217349,19217458-19217495,
19217597-19217760,19217833-19217946,19218042-19218083,
19218180-19218983
Length = 855
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/64 (23%), Positives = 34/64 (53%)
Frame = +2
Query: 224 KEMDEAFKKAQKPWSKLLQKVERARLEYHTACKQERTAQNQERNASGDSSFSPDQVKKMA 403
K+M E + +K +KLL+ ++ +L+Y + +T Q + R A S +V+++
Sbjct: 534 KQMTEKIRHEEKENAKLLESLQLTQLKYASRENVIKTLQEKIREAEQTSKTYQQRVRELE 593
Query: 404 DRVS 415
+ ++
Sbjct: 594 NELA 597
>08_02_0360 + 16196712-16197560,16198126-16198875
Length = 532
Score = 28.7 bits (61), Expect = 5.2
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +2
Query: 158 MAQIKNWQKETYHKSMIQLKERKEM-DEAFK-KAQKPWSKLLQKVERARLEYH 310
+A+++ W+++ YH + I + K D+ K K KP K+L R +L H
Sbjct: 198 IAELEEWREKAYHNAKIYKERTKRWHDKRIKIKKFKPGDKVLMFNSRVKLFGH 250
>06_02_0331 - 14503063-14503697,14503744-14504019,14504353-14504635
Length = 397
Score = 28.7 bits (61), Expect = 5.2
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +2
Query: 158 MAQIKNWQKETYHKSMIQLKERKEM-DEAFK-KAQKPWSKLLQKVERARLEYH 310
+A+++ W+++ YH + I + K D+ K K KP K+L R +L H
Sbjct: 14 IAELEEWREKAYHNAKIYKERTKRWHDKKIKIKKFKPGDKVLMFNSRVKLFDH 66
>01_05_0044 + 17531005-17531739,17532624-17532956,17532968-17533027
Length = 375
Score = 28.7 bits (61), Expect = 5.2
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +2
Query: 158 MAQIKNWQKETYHKSMIQLKERKEM-DEAFK-KAQKPWSKLLQKVERARLEYH 310
+A+++ W+++ YH + I + K D+ K K KP K+L R +L H
Sbjct: 160 IAELEEWREKAYHNAKIYKERTKRWHDKRIKIKKFKPGDKVLMFNSRVKLFGH 212
>03_05_0310 + 23008915-23009841,23010401-23011162
Length = 562
Score = 28.3 bits (60), Expect = 6.9
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = +2
Query: 158 MAQIKNWQKETYHKSMIQLKERKEMDEAFKKAQ--KPWSKLLQKVERARLEYH 310
+A+++ W+++ YH + I + K E K + KP K+L R +L H
Sbjct: 224 IAELEEWREKAYHNAKIYKERTKRWHEKRIKIKKFKPGDKVLMFNSRVKLFGH 276
>01_01_0711 + 5506632-5507328,5507410-5507485,5507544-5508234
Length = 487
Score = 28.3 bits (60), Expect = 6.9
Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Frame = -3
Query: 162 AITSFTSLSLTLRWRSESRSASTMLPFQAASIVP--YSGPFSIKSFHFLAHPLSL 4
A+ + T + RW S S +AS++LP AA+++ ++ P + F FLA L++
Sbjct: 29 ALATSTPTKQSPRWPSPSAAASSVLPSGAAALLESRWALPAAFGVFLFLAVTLAV 83
>09_06_0234 -
21747724-21747839,21748027-21748096,21749157-21749294,
21749389-21749493,21750157-21750527,21750612-21750694,
21750803-21751063,21751425-21751606,21752539-21752649,
21752727-21752798,21752883-21753036,21753329-21753341,
21754015-21754084,21754409-21754485,21754582-21754640,
21755327-21755580
Length = 711
Score = 27.9 bits (59), Expect = 9.1
Identities = 8/21 (38%), Positives = 16/21 (76%)
Frame = +2
Query: 662 DSQKDLKWWANNHGVNMAMAW 724
DS+++ K+W+N+ G+ +A W
Sbjct: 449 DSEQEHKFWSNSPGIGIAQLW 469
>08_02_0936 - 22771416-22771702,22772297-22772393,22772951-22773847
Length = 426
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 141 LSLTLRWRSESRSASTMLPFQAASIVPY 58
LSLTL W +E+ + S ++ A+ VPY
Sbjct: 85 LSLTLAWEAEATTESGVVKVSGAAEVPY 112
>05_04_0393 -
20895485-20895645,20895750-20896358,20896541-20896616,
20896729-20896920,20897118-20897438,20897880-20898119,
20898205-20898522,20898621-20898678,20898778-20898936,
20900090-20900308,20900400-20900614
Length = 855
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = -3
Query: 174 FFICAITSFTSLSLTLRWRSESRSASTMLPFQAASIVPYSG 52
FF+ I S T L + R R +R ST AS +P+ G
Sbjct: 123 FFVAYIDSRTQLLVRDRRRIATRYLSTFFIMDVASTIPFQG 163
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,486,320
Number of Sequences: 37544
Number of extensions: 461538
Number of successful extensions: 1462
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1399
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1461
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1992480932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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