Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0134
         (749 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakini...    27   0.47 
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    26   1.1  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    25   3.3  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    24   4.4  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    24   4.4  
AY146719-1|AAO12079.1|  159|Anopheles gambiae odorant-binding pr...    24   5.8  
AF437885-1|AAL84180.1|  157|Anopheles gambiae odorant binding pr...    24   5.8  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           23   7.6  
DQ013849-1|AAY40258.1|  264|Anopheles gambiae CYP325C2 protein.        23   7.6  
AJ618922-1|CAF02001.1|  272|Anopheles gambiae odorant-binding pr...    23   7.6  

>AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakinin
           GPCR protein.
          Length = 634

 Score = 27.5 bits (58), Expect = 0.47
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = +1

Query: 94  GGSGTTFRPPPQRQG*AGERRYGTDKELAEGNL 192
           G     +RPP    G  G+  YGT+  LA G L
Sbjct: 30  GPGSLLYRPPNSMAGDYGDELYGTNLSLALGEL 62


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 13/76 (17%), Positives = 33/76 (43%)
 Frame = +2

Query: 245 KKAQKPWSKLLQKVERARLEYHTACKQERTAQNQERNASGDSSFSPDQVKKMADRVSKCR 424
           K A+K   +  Q+  + + E      +++  +  +         S D++  + ++  +  
Sbjct: 248 KLAKKCTEEKEQQYNQFKQEMEAILARKKELETSKAKQVAIGQRSTDEINSLEEKTERLE 307

Query: 425 DEVSKNREKYQTALAE 472
           D +SK + +   ALA+
Sbjct: 308 DTISKQKRELMDALAK 323



 Score = 25.8 bits (54), Expect = 1.4
 Identities = 14/47 (29%), Positives = 28/47 (59%)
 Frame = -3

Query: 561 KNFNRCASICWHLSNTEVMSSMYRGLYAVISARAVWYFSRFFDTSSR 421
           K  +RC ++  ++ N +  +++   +Y   + RAV +FSR FD S++
Sbjct: 59  KLLSRCDNVISYIKNGKDSATIRISIYRN-NERAVRWFSRSFDHSAK 104


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 28/128 (21%), Positives = 50/128 (39%), Gaps = 2/128 (1%)
 Frame = +2

Query: 158 MAQIKNWQKETYHKSMIQLKERKEMDEAFKKAQKPWSKLLQKVERARLEYHTACKQERTA 337
           + ++   +K +  K ++  +E ++  +  K AQK      + V  A+ E      + +  
Sbjct: 239 LEELDGQRKSSGDKQLLLTQEIQKAQDRLKNAQKALKDAKKDVVTAKDEKSVLATEHQQL 298

Query: 338 QNQERNASGDSSFSPDQVKKMADRVSKCRDEVSKNREKYQTA--LAEITAYNPRYIEDMT 511
             ++       S   D+V+   D  SK R E    R K   A    E+    PRY E M 
Sbjct: 299 LREKTKLDLTISDLSDEVQ--GDNKSKERAEQELERLKITIAEKEKELEQVRPRY-EAMR 355

Query: 512 SVFDRCQQ 535
              + C +
Sbjct: 356 RKEEECSR 363


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 protein.
          Length = 961

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 10/66 (15%), Positives = 35/66 (53%)
 Frame = +2

Query: 170  KNWQKETYHKSMIQLKERKEMDEAFKKAQKPWSKLLQKVERARLEYHTACKQERTAQNQE 349
            +N++++   +   Q +++++ +   ++ Q       Q++E ++++  T    + +  N+E
Sbjct: 896  ENYRQQHQQQQQQQQQQQQQHEHEQQQQQNSMLATQQRLEASQMDQGTDQPMQESPCNEE 955

Query: 350  RNASGD 367
            +  +GD
Sbjct: 956  KIGAGD 961


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 22/73 (30%), Positives = 30/73 (41%)
 Frame = +2

Query: 380  PDQVKKMADRVSKCRDEVSKNREKYQTALAEITAYNPRYIEDMTSVFDRCQQMEAQRLKF 559
            PDQ+KK  D ++K         EK QT   +      R  E + S     ++ EA R K 
Sbjct: 996  PDQIKKSGDSLAKELQSKLDTLEKIQTPNMKAMQKLDRVTEKIQST---NEEFEAARKK- 1051

Query: 560  FKDVLFSFHKCLN 598
             K    +F K  N
Sbjct: 1052 AKKAKAAFEKVKN 1064


>AY146719-1|AAO12079.1|  159|Anopheles gambiae odorant-binding
           protein AgamOBP2 protein.
          Length = 159

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +1

Query: 76  CLEG*HGGSGTTFRPPPQRQG 138
           CL+G +  + TT RP P+R G
Sbjct: 19  CLDGANCSTITTQRPAPRRDG 39


>AF437885-1|AAL84180.1|  157|Anopheles gambiae odorant binding
           protein protein.
          Length = 157

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +1

Query: 76  CLEG*HGGSGTTFRPPPQRQG 138
           CL+G    + TT RP P+R G
Sbjct: 19  CLDGADCSTTTTQRPAPRRDG 39


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +3

Query: 276 FRRLNAPG*STTRLANKKEQRR 341
           F R+N PG S T+ A + E+R+
Sbjct: 917 FERVNDPGRSITKAAIRLEERQ 938


>DQ013849-1|AAY40258.1|  264|Anopheles gambiae CYP325C2 protein.
          Length = 264

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -3

Query: 120 RSESRSASTMLPFQAASIVPYSGPFSIKS 34
           RSE RS +  +PF A S     G +++ S
Sbjct: 191 RSEGRSTNVFIPFSAGSRNCIGGRYAMLS 219


>AJ618922-1|CAF02001.1|  272|Anopheles gambiae odorant-binding
           protein OBPjj5a protein.
          Length = 272

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = +2

Query: 482 YNPRYIEDMTSVFDRCQQMEAQRLKFFKDVLFSFHKCLNISQEPSLPQ 625
           Y   Y E +    D C    AQR +F +   F+  +C+NI     LP+
Sbjct: 103 YGEAYQEAIGKAVDACL---AQRDEFREQEKFTKSECVNIRNNFHLPK 147


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 813,620
Number of Sequences: 2352
Number of extensions: 17143
Number of successful extensions: 52
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 52
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)